RNA–Protein interactions for RNA: ENST00000470763.1

NPHP4-207, Transcript of nephrocystin 4, humanhuman

TSL 2

Gene NPHP4, Length 3,156 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-207ENST00000470763 P0C880 135 aa7.43□□□□□ -1.22
NPHP4-207ENST00000470763 C9orf92A6NGG3 77 aa7.42□□□□□ -1.22
NPHP4-207ENST00000470763 KRTAP10-1P60331 282 aa7.41□□□□□ -1.22
NPHP4-207ENST00000470763 KRTAP4-5Q9BYR2 181 aa7.41□□□□□ -1.22
NPHP4-207ENST00000470763 FAT1Q14517 4588 aa7.4□□□□□ -1.23
NPHP4-207ENST00000470763 DMBT1Q9UGM3 2413 aaPredicted RBP7.39□□□□□ -1.23
NPHP4-207ENST00000470763 K7ERS5 55 aa7.39□□□□□ -1.23
NPHP4-207ENST00000470763 COX6B2Q6YFQ2 88 aa7.37□□□□□ -1.23
NPHP4-207ENST00000470763 MYCBP2O75592 4640 aa7.28□□□□□ -1.24
NPHP4-207ENST00000470763 SPINT4Q6UDR6 99 aa7.27□□□□□ -1.25
NPHP4-207ENST00000470763 A0A0D9SG42 100 aa7.26□□□□□ -1.25
NPHP4-207ENST00000470763 C20orf166-AS1Q96NR2 134 aa7.26□□□□□ -1.25
NPHP4-207ENST00000470763 HERC1Q15751 4861 aa7.24□□□□□ -1.25
NPHP4-207ENST00000470763 TPRXLQ17RH7 258 aa7.24□□□□□ -1.25
NPHP4-207ENST00000470763 C10orf95Q9H7T3 257 aa7.22□□□□□ -1.25
NPHP4-207ENST00000470763 RPL37P61927 97 aaKnown RBP7.22□□□□□ -1.25
NPHP4-207ENST00000470763 KRTAP13-4Q3LI77 160 aa7.21□□□□□ -1.25
NPHP4-207ENST00000470763 SMR3BP02814 79 aaPredicted RBP7.2□□□□□ -1.26
NPHP4-207ENST00000470763 RPS29P62273 56 aaKnown RBP7.18□□□□□ -1.26
NPHP4-207ENST00000470763 Q5VSD8 79 aa7.18□□□□□ -1.26
NPHP4-207ENST00000470763 NDUFAF8A1L188 74 aa7.16□□□□□ -1.26
NPHP4-207ENST00000470763 KRTAP10-6P60371 365 aaPredicted RBP7.16□□□□□ -1.26
NPHP4-207ENST00000470763 LRP1Q07954 4544 aaKnown RBP7.12□□□□□ -1.27
NPHP4-207ENST00000470763 KRTAP3-3Q9BYR6 98 aa7.09□□□□□ -1.27
NPHP4-207ENST00000470763 KRTAP10-4P60372 401 aaPredicted RBP7.06□□□□□ -1.28
NPHP4-207ENST00000470763 KRTAP3-2Q9BYR7 98 aa7.06□□□□□ -1.28
NPHP4-207ENST00000470763 FAT3Q8TDW7 4589 aa7.06□□□□□ -1.28
NPHP4-207ENST00000470763 PKHD1L1Q86WI1 4243 aa7.06□□□□□ -1.28
NPHP4-207ENST00000470763 KRTAP15-1Q3LI76 137 aa7.05□□□□□ -1.28
NPHP4-207ENST00000470763 S4R3F8 94 aa7.01□□□□□ -1.29
NPHP4-207ENST00000470763 KRTAP12-2P59991 146 aa7□□□□□ -1.29
NPHP4-207ENST00000470763 KRTAP10-8P60410 259 aa6.96□□□□□ -1.3
NPHP4-207ENST00000470763 HMCN2Q8NDA2 5059 aa6.92□□□□□ -1.3
NPHP4-207ENST00000470763 J3QL48 77 aa6.92□□□□□ -1.3
NPHP4-207ENST00000470763 TNXBP22105 4242 aa6.91□□□□□ -1.3
NPHP4-207ENST00000470763 KRTAP12-1P59990 96 aa6.88□□□□□ -1.31
NPHP4-207ENST00000470763 MT1HL1P0DM35 61 aa6.83□□□□□ -1.32
NPHP4-207ENST00000470763 UBR4Q5T4S7 5183 aa6.82□□□□□ -1.32
NPHP4-207ENST00000470763 XP32Q5T750 250 aa6.81□□□□□ -1.32
NPHP4-207ENST00000470763 A0A0A0MQY5 61 aa6.75□□□□□ -1.33
NPHP4-207ENST00000470763 LRP2P98164 4655 aa6.73□□□□□ -1.33
NPHP4-207ENST00000470763 LPAP08519 4548 aa6.72□□□□□ -1.33
NPHP4-207ENST00000470763 M0QZ58 72 aa6.66□□□□□ -1.34
NPHP4-207ENST00000470763 RNF213Q63HN8 5207 aa6.65□□□□□ -1.34
NPHP4-207ENST00000470763 LUZP6Q538Z0 58 aa6.59□□□□□ -1.35
NPHP4-207ENST00000470763 PLAC4Q8WY50 150 aa6.58□□□□□ -1.36
NPHP4-207ENST00000470763 R4GN34 69 aa6.53□□□□□ -1.36
NPHP4-207ENST00000470763 MUC2Q02817 5179 aa6.48□□□□□ -1.37
NPHP4-207ENST00000470763 LORP23490 312 aaPredicted RBP6.43□□□□□ -1.38
NPHP4-207ENST00000470763 MUC17Q685J3 4493 aa6.27□□□□□ -1.41
NPHP4-207ENST00000470763 CAMK2N1Q7Z7J9 78 aa6.26□□□□□ -1.41
NPHP4-207ENST00000470763 PP632Q6XCG6 107 aa6.23□□□□□ -1.41
NPHP4-207ENST00000470763 FAT4Q6V0I7 4981 aa6.21□□□□□ -1.42
NPHP4-207ENST00000470763 KRTAP4-1Q9BYQ7 146 aa6.08□□□□□ -1.44
NPHP4-207ENST00000470763 LCE2AQ5TA79 106 aaPredicted RBP6.08□□□□□ -1.44
NPHP4-207ENST00000470763 SEC61BP60468 96 aaKnown RBP6.02□□□□□ -1.45
NPHP4-207ENST00000470763 TNP1P09430 55 aa6.01□□□□□ -1.45
NPHP4-207ENST00000470763 SPRR5A0A1B0GTR4 108 aa5.97□□□□□ -1.45
NPHP4-207ENST00000470763 KRTAP19-2Q3LHN2 52 aa5.94□□□□□ -1.46
NPHP4-207ENST00000470763 KRTAP9-2Q9BYQ4 174 aa5.91□□□□□ -1.46
NPHP4-207ENST00000470763 LCE2CQ5TA81 110 aa5.91□□□□□ -1.46
NPHP4-207ENST00000470763 KRTAP23-1A1A580 65 aa5.85□□□□□ -1.47
NPHP4-207ENST00000470763 FLGP20930 4061 aaPredicted RBP5.83□□□□□ -1.48
NPHP4-207ENST00000470763 MT1HP80294 61 aa5.81□□□□□ -1.48
NPHP4-207ENST00000470763 FSIP2Q5CZC0 6907 aa5.75□□□□□ -1.49
NPHP4-207ENST00000470763 PRO2289Q9P1D8 64 aa5.72□□□□□ -1.49
NPHP4-207ENST00000470763 LCE2DQ5TA82 110 aaPredicted RBP5.71□□□□□ -1.49
NPHP4-207ENST00000470763 LCE3AQ5TA76 89 aa5.71□□□□□ -1.5
NPHP4-207ENST00000470763 KRTAP9-6A0A140TA67 174 aa5.69□□□□□ -1.5
NPHP4-207ENST00000470763 M0R2T5 61 aa5.63□□□□□ -1.51
NPHP4-207ENST00000470763 KRTAP19-1Q8IUB9 90 aa5.57□□□□□ -1.52
NPHP4-207ENST00000470763 CRCT1Q9UGL9 99 aa5.57□□□□□ -1.52
NPHP4-207ENST00000470763 SPRR2GQ9BYE4 73 aa5.55□□□□□ -1.52
NPHP4-207ENST00000470763 INE1O15225 51 aa5.54□□□□□ -1.52
NPHP4-207ENST00000470763 KRTAP9-8Q9BYQ0 159 aa5.51□□□□□ -1.53
NPHP4-207ENST00000470763 USH2AO75445 5202 aa5.47□□□□□ -1.53
NPHP4-207ENST00000470763 KRTAP8-1Q8IUC2 63 aa5.46□□□□□ -1.54
NPHP4-207ENST00000470763 SSPOA2VEC9 5147 aa5.42□□□□□ -1.54
NPHP4-207ENST00000470763 MT2AP02795 61 aa5.41□□□□□ -1.54
NPHP4-207ENST00000470763 MT1FP04733 61 aa5.39□□□□□ -1.55
NPHP4-207ENST00000470763 KRTAP12-3P60328 96 aa5.38□□□□□ -1.55
NPHP4-207ENST00000470763 KRTAP10-10P60014 251 aa5.37□□□□□ -1.55
NPHP4-207ENST00000470763 KRTAP9-3Q9BYQ3 159 aa5.33□□□□□ -1.56
NPHP4-207ENST00000470763 LCE2BO14633 110 aa5.32□□□□□ -1.56
NPHP4-207ENST00000470763 KRTAP10-12P60413 245 aa5.32□□□□□ -1.56
NPHP4-207ENST00000470763 KRTAP10-5P60370 271 aa5.3□□□□□ -1.56
NPHP4-207ENST00000470763 MT1XP80297 61 aa5.28□□□□□ -1.56
NPHP4-207ENST00000470763 FCGBPQ9Y6R7 5405 aaPredicted RBP5.28□□□□□ -1.56
NPHP4-207ENST00000470763 KRTAP10-7P60409 375 aaPredicted RBP5.23□□□□□ -1.57
NPHP4-207ENST00000470763 MT1BP07438 61 aa5.22□□□□□ -1.57
NPHP4-207ENST00000470763 KRTAP19-8Q3LI54 63 aa5.21□□□□□ -1.58
NPHP4-207ENST00000470763 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.2□□□□□ -1.58
NPHP4-207ENST00000470763 MACF1Q9UPN3 7388 aaKnown RBP5.13□□□□□ -1.59
NPHP4-207ENST00000470763 KRTAP9-7A8MTY7 169 aa5.12□□□□□ -1.59
NPHP4-207ENST00000470763 KRTAP19-6Q3LI70 58 aa5.1□□□□□ -1.59
NPHP4-207ENST00000470763 SYNE2Q8WXH0 6885 aaKnown RBP5.09□□□□□ -1.6
NPHP4-207ENST00000470763 KMT2DO14686 5537 aa5.08□□□□□ -1.6
NPHP4-207ENST00000470763 LCE3CQ5T5A8 94 aa5.06□□□□□ -1.6
NPHP4-207ENST00000470763 KRTAP19-5Q3LI72 72 aa5.06□□□□□ -1.6
NPHP4-207ENST00000470763 KRTAP9-6A8MVA2 160 aa5□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms