RNA–Protein interactions for RNA: ENST00000470408.5

UBE3C-205, Transcript of ubiquitin protein ligase E3C, humanhuman

TSL 2

Gene UBE3C, Length 5,197 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3C-205ENST00000470408 KRTAP3-1Q9BYR8 98 aa4.52□□□□□ -1.69
UBE3C-205ENST00000470408 STARD9Q9P2P6 4700 aa4.5□□□□□ -1.69
UBE3C-205ENST00000470408 PRKDCP78527 4128 aaKnown RBP4.48□□□□□ -1.69
UBE3C-205ENST00000470408 KMT2AQ03164 3969 aa4.44□□□□□ -1.7
UBE3C-205ENST00000470408 KRTAP15-1Q3LI76 137 aa4.43□□□□□ -1.7
UBE3C-205ENST00000470408 KRTAP10-6P60371 365 aaPredicted RBP4.43□□□□□ -1.7
UBE3C-205ENST00000470408 VPS13DQ5THJ4 4388 aa4.42□□□□□ -1.7
UBE3C-205ENST00000470408 DNHD1Q96M86 4753 aa4.41□□□□□ -1.7
UBE3C-205ENST00000470408 KRTAP4-5Q9BYR2 181 aa4.4□□□□□ -1.71
UBE3C-205ENST00000470408 ALMS1Q8TCU4 4167 aa4.39□□□□□ -1.71
UBE3C-205ENST00000470408 FRAS1Q86XX4 4008 aa4.38□□□□□ -1.71
UBE3C-205ENST00000470408 DNAH2Q9P225 4427 aa4.37□□□□□ -1.71
UBE3C-205ENST00000470408 DYNC2H1Q8NCM8 4307 aaKnown RBP4.37□□□□□ -1.71
UBE3C-205ENST00000470408 DNAH11Q96DT5 4516 aa4.36□□□□□ -1.71
UBE3C-205ENST00000470408 INE1O15225 51 aa4.36□□□□□ -1.71
UBE3C-205ENST00000470408 DNAH8Q96JB1 4490 aa4.35□□□□□ -1.71
UBE3C-205ENST00000470408 DNAH17Q9UFH2 4485 aa4.35□□□□□ -1.71
UBE3C-205ENST00000470408 HECTD4Q9Y4D8 3996 aa4.33□□□□□ -1.72
UBE3C-205ENST00000470408 DNAH6Q9C0G6 4158 aa4.31□□□□□ -1.72
UBE3C-205ENST00000470408 KRTAP3-2Q9BYR7 98 aa4.27□□□□□ -1.73
UBE3C-205ENST00000470408 LRP1BQ9NZR2 4599 aa4.26□□□□□ -1.73
UBE3C-205ENST00000470408 KRTAP3-3Q9BYR6 98 aa4.26□□□□□ -1.73
UBE3C-205ENST00000470408 DNAH5Q8TE73 4624 aa4.25□□□□□ -1.73
UBE3C-205ENST00000470408 HYDINQ4G0P3 5121 aa4.23□□□□□ -1.73
UBE3C-205ENST00000470408 KRTAP10-12P60413 245 aa4.19□□□□□ -1.74
UBE3C-205ENST00000470408 VPS13BQ7Z7G8 4022 aa4.18□□□□□ -1.74
UBE3C-205ENST00000470408 KRTAP23-1A1A580 65 aa4.18□□□□□ -1.74
UBE3C-205ENST00000470408 FAT1Q14517 4588 aa4.17□□□□□ -1.74
UBE3C-205ENST00000470408 DYNC1H1Q14204 4646 aaKnown RBP4.15□□□□□ -1.75
UBE3C-205ENST00000470408 FAT2Q9NYQ8 4349 aa4.13□□□□□ -1.75
UBE3C-205ENST00000470408 PKHD1P08F94 4074 aa4.13□□□□□ -1.75
UBE3C-205ENST00000470408 PKD1P98161 4303 aa4.11□□□□□ -1.75
UBE3C-205ENST00000470408 SACSQ9NZJ4 4579 aa4.09□□□□□ -1.75
UBE3C-205ENST00000470408 KRTAP12-3P60328 96 aa4.04□□□□□ -1.76
UBE3C-205ENST00000470408 APOBP04114 4563 aaKnown RBP4.01□□□□□ -1.77
UBE3C-205ENST00000470408 MT1HP80294 61 aa4□□□□□ -1.77
UBE3C-205ENST00000470408 LRP1Q07954 4544 aaKnown RBP3.98□□□□□ -1.77
UBE3C-205ENST00000470408 KRTAP4-1Q9BYQ7 146 aa3.97□□□□□ -1.77
UBE3C-205ENST00000470408 RYR2Q92736 4967 aa3.97□□□□□ -1.77
UBE3C-205ENST00000470408 KMT2CQ8NEZ4 4911 aaKnown RBP3.96□□□□□ -1.78
UBE3C-205ENST00000470408 KRTAP8-1Q8IUC2 63 aa3.95□□□□□ -1.78
UBE3C-205ENST00000470408 MYCBP2O75592 4640 aa3.95□□□□□ -1.78
UBE3C-205ENST00000470408 LORP23490 312 aaPredicted RBP3.94□□□□□ -1.78
UBE3C-205ENST00000470408 CRCT1Q9UGL9 99 aa3.94□□□□□ -1.78
UBE3C-205ENST00000470408 SPRR2GQ9BYE4 73 aa3.93□□□□□ -1.78
UBE3C-205ENST00000470408 MT2AP02795 61 aa3.93□□□□□ -1.78
UBE3C-205ENST00000470408 LCE3AQ5TA76 89 aa3.92□□□□□ -1.78
UBE3C-205ENST00000470408 KRTAP17-1Q9BYP8 105 aa3.92□□□□□ -1.78
UBE3C-205ENST00000470408 KIAA1109Q2LD37 5005 aa3.88□□□□□ -1.79
UBE3C-205ENST00000470408 RYR3Q15413 4870 aa3.87□□□□□ -1.79
UBE3C-205ENST00000470408 HSPG2P98160 4391 aa3.87□□□□□ -1.79
UBE3C-205ENST00000470408 RYR1P21817 5038 aa3.86□□□□□ -1.79
UBE3C-205ENST00000470408 PKHD1L1Q86WI1 4243 aa3.86□□□□□ -1.79
UBE3C-205ENST00000470408 FAT3Q8TDW7 4589 aa3.86□□□□□ -1.79
UBE3C-205ENST00000470408 KRTAP19-4Q3LI73 84 aa3.85□□□□□ -1.79
UBE3C-205ENST00000470408 MT1FP04733 61 aa3.81□□□□□ -1.8
UBE3C-205ENST00000470408 TNXBP22105 4242 aa3.79□□□□□ -1.8
UBE3C-205ENST00000470408 LPAP08519 4548 aa3.75□□□□□ -1.81
UBE3C-205ENST00000470408 EPPK1P58107 5090 aaKnown RBP3.73□□□□□ -1.81
UBE3C-205ENST00000470408 LRP2P98164 4655 aa3.73□□□□□ -1.81
UBE3C-205ENST00000470408 KRTAP19-8Q3LI54 63 aa3.72□□□□□ -1.81
UBE3C-205ENST00000470408 HERC1Q15751 4861 aa3.7□□□□□ -1.82
UBE3C-205ENST00000470408 BIRC6Q9NR09 4857 aa3.68□□□□□ -1.82
UBE3C-205ENST00000470408 KRTAP10-7P60409 375 aaPredicted RBP3.67□□□□□ -1.82
UBE3C-205ENST00000470408 SPRR2FQ96RM1 72 aa3.66□□□□□ -1.82
UBE3C-205ENST00000470408 KRTAP10-5P60370 271 aa3.65□□□□□ -1.82
UBE3C-205ENST00000470408 ABCA13Q86UQ4 5058 aa3.62□□□□□ -1.83
UBE3C-205ENST00000470408 KRTAP19-1Q8IUB9 90 aa3.61□□□□□ -1.83
UBE3C-205ENST00000470408 HERC2O95714 4834 aa3.59□□□□□ -1.83
UBE3C-205ENST00000470408 KRTAP19-5Q3LI72 72 aa3.58□□□□□ -1.84
UBE3C-205ENST00000470408 KRTAP9-8Q9BYQ0 159 aa3.55□□□□□ -1.84
UBE3C-205ENST00000470408 LCE3CQ5T5A8 94 aa3.53□□□□□ -1.84
UBE3C-205ENST00000470408 LCE2CQ5TA81 110 aa3.52□□□□□ -1.85
UBE3C-205ENST00000470408 MT1BP07438 61 aa3.5□□□□□ -1.85
UBE3C-205ENST00000470408 SPRR2EP22531 72 aa3.5□□□□□ -1.85
UBE3C-205ENST00000470408 SPRR2BP35325 72 aa3.5□□□□□ -1.85
UBE3C-205ENST00000470408 SPRR2AP35326 72 aa3.5□□□□□ -1.85
UBE3C-205ENST00000470408 KRTAP9-3Q9BYQ3 159 aa3.49□□□□□ -1.85
UBE3C-205ENST00000470408 MT1XP80297 61 aa3.48□□□□□ -1.85
UBE3C-205ENST00000470408 MUC2Q02817 5179 aa3.46□□□□□ -1.85
UBE3C-205ENST00000470408 PCLOQ9Y6V0 5065 aa3.46□□□□□ -1.86
UBE3C-205ENST00000470408 SPRR5A0A1B0GTR4 108 aa3.44□□□□□ -1.86
UBE3C-205ENST00000470408 SPRR2DP22532 72 aa3.42□□□□□ -1.86
UBE3C-205ENST00000470408 MUC17Q685J3 4493 aa3.41□□□□□ -1.86
UBE3C-205ENST00000470408 MT1GP13640 62 aa3.41□□□□□ -1.86
UBE3C-205ENST00000470408 LCE2BO14633 110 aa3.38□□□□□ -1.87
UBE3C-205ENST00000470408 KRTAP12-4P60329 112 aa3.38□□□□□ -1.87
UBE3C-205ENST00000470408 KRTAP19-2Q3LHN2 52 aa3.36□□□□□ -1.87
UBE3C-205ENST00000470408 KRTAP9-6A0A140TA67 174 aa3.34□□□□□ -1.87
UBE3C-205ENST00000470408 FAT4Q6V0I7 4981 aa3.31□□□□□ -1.88
UBE3C-205ENST00000470408 FLGP20930 4061 aaPredicted RBP3.3□□□□□ -1.88
UBE3C-205ENST00000470408 LCE2DQ5TA82 110 aaPredicted RBP3.3□□□□□ -1.88
UBE3C-205ENST00000470408 KRTAP19-6Q3LI70 58 aa3.28□□□□□ -1.88
UBE3C-205ENST00000470408 RNF213Q63HN8 5207 aa3.28□□□□□ -1.88
UBE3C-205ENST00000470408 HMCN2Q8NDA2 5059 aa3.27□□□□□ -1.89
UBE3C-205ENST00000470408 UBR4Q5T4S7 5183 aa3.25□□□□□ -1.89
UBE3C-205ENST00000470408 KRTAP19-3Q7Z4W3 81 aa3.25□□□□□ -1.89
UBE3C-205ENST00000470408 KRTAP9-2Q9BYQ4 174 aa3.24□□□□□ -1.89
UBE3C-205ENST00000470408 KRTAP4-8A0A0G2JLE6 195 aa3.23□□□□□ -1.89
UBE3C-205ENST00000470408 KRTAP4-8Q9BYQ9 185 aa3.23□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms