RNA–Protein interactions for RNA: ENST00000470094.1

BRCA2-202, Transcript of BRCA2, DNA repair associated, humanhuman

TSL 5

Gene BRCA2, Length 842 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2-202ENST00000470094 FREM2Q5SZK8 3169 aa0.48□□□□□ -2.33
BRCA2-202ENST00000470094 SETXQ7Z333 2677 aaKnown RBP0.48□□□□□ -2.33
BRCA2-202ENST00000470094 MUC3AQ02505 3323 aa0.48□□□□□ -2.33
BRCA2-202ENST00000470094 COL7A1Q02388 2944 aa0.48□□□□□ -2.33
BRCA2-202ENST00000470094 LRRK2Q5S007 2527 aa0.47□□□□□ -2.33
BRCA2-202ENST00000470094 PTPN13Q12923 2485 aa0.47□□□□□ -2.33
BRCA2-202ENST00000470094 DNAH6Q9C0G6 4158 aa0.47□□□□□ -2.33
BRCA2-202ENST00000470094 CFAP47Q6ZTR5 3102 aa0.47□□□□□ -2.33
BRCA2-202ENST00000470094 DNAH9Q9NYC9 4486 aa0.47□□□□□ -2.33
BRCA2-202ENST00000470094 HIVEP1P15822 2718 aa0.47□□□□□ -2.33
BRCA2-202ENST00000470094 C9orf92A6NGG3 77 aa0.47□□□□□ -2.33
BRCA2-202ENST00000470094 MXRA5Q9NR99 2828 aa0.47□□□□□ -2.33
BRCA2-202ENST00000470094 LAMA1P25391 3075 aa0.47□□□□□ -2.33
BRCA2-202ENST00000470094 HIVEP3Q5T1R4 2406 aa0.47□□□□□ -2.33
BRCA2-202ENST00000470094 DCHS1Q96JQ0 3298 aa0.47□□□□□ -2.33
BRCA2-202ENST00000470094 DNAH17Q9UFH2 4485 aa0.46□□□□□ -2.34
BRCA2-202ENST00000470094 UTP20O75691 2785 aaKnown RBP0.46□□□□□ -2.34
BRCA2-202ENST00000470094 CSMD1Q96PZ7 3565 aa0.46□□□□□ -2.34
BRCA2-202ENST00000470094 PKHD1P08F94 4074 aa0.46□□□□□ -2.34
BRCA2-202ENST00000470094 ACANP16112 2415 aa0.46□□□□□ -2.34
BRCA2-202ENST00000470094 LRP1Q07954 4544 aaKnown RBP0.46□□□□□ -2.34
BRCA2-202ENST00000470094 VPS13AQ96RL7 3174 aa0.46□□□□□ -2.34
BRCA2-202ENST00000470094 UTRNP46939 3433 aa0.46□□□□□ -2.34
BRCA2-202ENST00000470094 TNP1P09430 55 aa0.46□□□□□ -2.34
BRCA2-202ENST00000470094 DEFB1P60022 68 aa0.46□□□□□ -2.34
BRCA2-202ENST00000470094 KRTAP8-1Q8IUC2 63 aa0.46□□□□□ -2.34
BRCA2-202ENST00000470094 DEFB124Q8NES8 71 aa0.46□□□□□ -2.34
BRCA2-202ENST00000470094 Q9Y3F1 56 aa0.46□□□□□ -2.34
BRCA2-202ENST00000470094 XIRP2A4UGR9 3374 aa0.45□□□□□ -2.34
BRCA2-202ENST00000470094 TNXBP22105 4242 aa0.45□□□□□ -2.34
BRCA2-202ENST00000470094 NIPBLQ6KC79 2804 aaeCLIP0.45□□□□□ -2.34
BRCA2-202ENST00000470094 SRCAPQ6ZRS2 3230 aa0.45□□□□□ -2.34
BRCA2-202ENST00000470094 H3BNG1 76 aa0.45□□□□□ -2.34
BRCA2-202ENST00000470094 STATHP02808 62 aa0.45□□□□□ -2.34
BRCA2-202ENST00000470094 APELAP0DMC3 54 aa0.45□□□□□ -2.34
BRCA2-202ENST00000470094 ITPR2Q14571 2701 aa0.45□□□□□ -2.34
BRCA2-202ENST00000470094 ADGRG4Q8IZF6 3080 aa0.45□□□□□ -2.34
BRCA2-202ENST00000470094 DNAH5Q8TE73 4624 aa0.45□□□□□ -2.34
BRCA2-202ENST00000470094 USP34Q70CQ2 3546 aa0.44□□□□□ -2.34
BRCA2-202ENST00000470094 LAMA3Q16787 3333 aa0.44□□□□□ -2.34
BRCA2-202ENST00000470094 LAMA2P24043 3122 aaKnown RBP0.44□□□□□ -2.34
BRCA2-202ENST00000470094 GOLGB1Q14789 3259 aaKnown RBP0.44□□□□□ -2.34
BRCA2-202ENST00000470094 SPEGQ15772 3267 aa0.44□□□□□ -2.34
BRCA2-202ENST00000470094 STAB1Q9NY15 2570 aa0.44□□□□□ -2.34
BRCA2-202ENST00000470094 APOBP04114 4563 aaKnown RBP0.44□□□□□ -2.34
BRCA2-202ENST00000470094 CFAP46Q8IYW2 2715 aa0.44□□□□□ -2.34
BRCA2-202ENST00000470094 ANKRD11Q6UB99 2663 aaPredicted RBP0.44□□□□□ -2.34
BRCA2-202ENST00000470094 CSMD2Q7Z408 3487 aa0.44□□□□□ -2.34
BRCA2-202ENST00000470094 SVEP1Q4LDE5 3571 aa0.44□□□□□ -2.34
BRCA2-202ENST00000470094 LOC400499M0QZD8 3231 aa0.43□□□□□ -2.34
BRCA2-202ENST00000470094 TRRAPQ9Y4A5 3859 aa0.43□□□□□ -2.34
BRCA2-202ENST00000470094 MTORP42345 2549 aa0.43□□□□□ -2.34
BRCA2-202ENST00000470094 NCOR2Q9Y618 2525 aa0.43□□□□□ -2.34
BRCA2-202ENST00000470094 GCN1Q92616 2671 aaKnown RBP0.43□□□□□ -2.34
BRCA2-202ENST00000470094 CUBNO60494 3623 aa0.43□□□□□ -2.34
BRCA2-202ENST00000470094 TEX15Q9BXT5 2789 aa0.43□□□□□ -2.34
BRCA2-202ENST00000470094 SONP18583 2426 aaKnown RBP0.43□□□□□ -2.34
BRCA2-202ENST00000470094 SPG11Q96JI7 2443 aa0.43□□□□□ -2.34
BRCA2-202ENST00000470094 M0R2T5 61 aa0.43□□□□□ -2.34
BRCA2-202ENST00000470094 RPS29P62273 56 aaKnown RBP0.43□□□□□ -2.34
BRCA2-202ENST00000470094 DEFB135Q30KP9 77 aa0.43□□□□□ -2.34
BRCA2-202ENST00000470094 ASPMQ8IZT6 3477 aa0.43□□□□□ -2.34
BRCA2-202ENST00000470094 LPAP08519 4548 aa0.43□□□□□ -2.34
BRCA2-202ENST00000470094 MDN1Q9NU22 5596 aa0.43□□□□□ -2.34
BRCA2-202ENST00000470094 FLNBO75369 2602 aaKnown RBP0.43□□□□□ -2.34
BRCA2-202ENST00000470094 KMT2DO14686 5537 aa0.43□□□□□ -2.34
BRCA2-202ENST00000470094 VPS13CQ709C8 3753 aa0.43□□□□□ -2.34
BRCA2-202ENST00000470094 CACNA1AO00555 2505 aa0.42□□□□□ -2.34
BRCA2-202ENST00000470094 ANKHD1Q8IWZ3 2542 aaKnown RBP0.42□□□□□ -2.34
BRCA2-202ENST00000470094 PLECQ15149 4684 aaKnown RBP0.42□□□□□ -2.34
BRCA2-202ENST00000470094 EP400Q96L91 3159 aa0.42□□□□□ -2.34
BRCA2-202ENST00000470094 USP9XQ93008 2570 aaPredicted RBP0.42□□□□□ -2.34
BRCA2-202ENST00000470094 MUC17Q685J3 4493 aa0.42□□□□□ -2.34
BRCA2-202ENST00000470094 TGP01266 2768 aa0.42□□□□□ -2.34
BRCA2-202ENST00000470094 ZFYVE26Q68DK2 2539 aa0.41□□□□□ -2.34
BRCA2-202ENST00000470094 MT1AP04731 61 aa0.41□□□□□ -2.34
BRCA2-202ENST00000470094 SPART-AS1P0CW21 52 aa0.41□□□□□ -2.34
BRCA2-202ENST00000470094 LINC01556Q5JQF7 62 aa0.41□□□□□ -2.34
BRCA2-202ENST00000470094 TEP1Q99973 2627 aaKnown RBP0.41□□□□□ -2.34
BRCA2-202ENST00000470094 UNC79Q9P2D8 2635 aa0.41□□□□□ -2.34
BRCA2-202ENST00000470094 PCNTO95613 3336 aa0.41□□□□□ -2.34
BRCA2-202ENST00000470094 NBEAL1Q6ZS30 2694 aa0.41□□□□□ -2.34
BRCA2-202ENST00000470094 DYNC1H1Q14204 4646 aaKnown RBP0.4□□□□□ -2.35
BRCA2-202ENST00000470094 ACACBO00763 2458 aa0.4□□□□□ -2.35
BRCA2-202ENST00000470094 FAT1Q14517 4588 aa0.4□□□□□ -2.35
BRCA2-202ENST00000470094 MYO18BQ8IUG5 2567 aa0.4□□□□□ -2.35
BRCA2-202ENST00000470094 HTN1P15515 57 aa0.4□□□□□ -2.35
BRCA2-202ENST00000470094 DEFB108BQ8NET1 73 aa0.4□□□□□ -2.35
BRCA2-202ENST00000470094 CENPEQ02224 2701 aa0.39□□□□□ -2.35
BRCA2-202ENST00000470094 LRP1BQ9NZR2 4599 aa0.39□□□□□ -2.35
BRCA2-202ENST00000470094 VCANP13611 3396 aa0.39□□□□□ -2.35
BRCA2-202ENST00000470094 A0A096LPF7 62 aa0.39□□□□□ -2.35
BRCA2-202ENST00000470094 SMR3BP02814 79 aaPredicted RBP0.39□□□□□ -2.35
BRCA2-202ENST00000470094 DEFB136Q30KP8 78 aa0.39□□□□□ -2.35
BRCA2-202ENST00000470094 KRTAP19-5Q3LI72 72 aa0.39□□□□□ -2.35
BRCA2-202ENST00000470094 TLN2Q9Y4G6 2542 aa0.39□□□□□ -2.35
BRCA2-202ENST00000470094 SYNE1Q8NF91 8797 aaKnown RBP0.39□□□□□ -2.35
BRCA2-202ENST00000470094 BRCA2P51587 3418 aa0.38□□□□□ -2.35
BRCA2-202ENST00000470094 PHGR1C9JFL3 82 aa0.38□□□□□ -2.35
BRCA2-202ENST00000470094 PRM1P04553 51 aa0.38□□□□□ -2.35
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms