RNA–Protein interactions for RNA: ENST00000467371.1

SPTBN1-204, Transcript of spectrin beta, non-erythrocytic 1, humanhuman

TSL 2

Gene SPTBN1, Length 3,332 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN1-204ENST00000467371 DMBT1Q9UGM3 2413 aaPredicted RBP3.92□□□□□ -1.78
SPTBN1-204ENST00000467371 LCE5AQ5TCM9 118 aa3.92□□□□□ -1.78
SPTBN1-204ENST00000467371 DNAH17Q9UFH2 4485 aa3.9□□□□□ -1.78
SPTBN1-204ENST00000467371 SPINK1P00995 79 aa3.9□□□□□ -1.79
SPTBN1-204ENST00000467371 PLAC4Q8WY50 150 aa3.9□□□□□ -1.79
SPTBN1-204ENST00000467371 HECTD4Q9Y4D8 3996 aa3.89□□□□□ -1.79
SPTBN1-204ENST00000467371 C9orf92A6NGG3 77 aa3.88□□□□□ -1.79
SPTBN1-204ENST00000467371 KRTAP13-2Q52LG2 175 aa3.87□□□□□ -1.79
SPTBN1-204ENST00000467371 LRP1BQ9NZR2 4599 aa3.86□□□□□ -1.79
SPTBN1-204ENST00000467371 COX6B2Q6YFQ2 88 aa3.84□□□□□ -1.79
SPTBN1-204ENST00000467371 PKHD1P08F94 4074 aa3.83□□□□□ -1.8
SPTBN1-204ENST00000467371 KRTAP12-2P59991 146 aa3.82□□□□□ -1.8
SPTBN1-204ENST00000467371 RPL37P61927 97 aaKnown RBP3.82□□□□□ -1.8
SPTBN1-204ENST00000467371 FAT1Q14517 4588 aa3.81□□□□□ -1.8
SPTBN1-204ENST00000467371 C10orf95Q9H7T3 257 aa3.8□□□□□ -1.8
SPTBN1-204ENST00000467371 VPS13BQ7Z7G8 4022 aa3.79□□□□□ -1.8
SPTBN1-204ENST00000467371 DNAH5Q8TE73 4624 aa3.79□□□□□ -1.8
SPTBN1-204ENST00000467371 FAT2Q9NYQ8 4349 aa3.79□□□□□ -1.8
SPTBN1-204ENST00000467371 LCE4AQ5TA78 99 aa3.79□□□□□ -1.8
SPTBN1-204ENST00000467371 KRTAP2-2Q9BYT5 123 aa3.78□□□□□ -1.8
SPTBN1-204ENST00000467371 KRTAP1-4P0C5Y4 121 aa3.75□□□□□ -1.81
SPTBN1-204ENST00000467371 KRTAP9-4Q9BYQ2 154 aa3.74□□□□□ -1.81
SPTBN1-204ENST00000467371 XP32Q5T750 250 aa3.73□□□□□ -1.81
SPTBN1-204ENST00000467371 KRTAP13-4Q3LI77 160 aa3.72□□□□□ -1.81
SPTBN1-204ENST00000467371 KRTAP10-6P60371 365 aaPredicted RBP3.72□□□□□ -1.81
SPTBN1-204ENST00000467371 KMT2CQ8NEZ4 4911 aaKnown RBP3.72□□□□□ -1.81
SPTBN1-204ENST00000467371 MYCBP2O75592 4640 aa3.7□□□□□ -1.82
SPTBN1-204ENST00000467371 PP632Q6XCG6 107 aa3.69□□□□□ -1.82
SPTBN1-204ENST00000467371 DYNC1H1Q14204 4646 aaKnown RBP3.68□□□□□ -1.82
SPTBN1-204ENST00000467371 LRP1Q07954 4544 aaKnown RBP3.67□□□□□ -1.82
SPTBN1-204ENST00000467371 S4R3F8 94 aa3.67□□□□□ -1.82
SPTBN1-204ENST00000467371 PKD1P98161 4303 aa3.67□□□□□ -1.82
SPTBN1-204ENST00000467371 SACSQ9NZJ4 4579 aa3.66□□□□□ -1.82
SPTBN1-204ENST00000467371 KRTAP9-9Q9BYP9 154 aa3.66□□□□□ -1.82
SPTBN1-204ENST00000467371 KRTAP9-6A0A140TA67 174 aa3.65□□□□□ -1.83
SPTBN1-204ENST00000467371 KRTAP9-7A8MTY7 169 aa3.65□□□□□ -1.83
SPTBN1-204ENST00000467371 FAT3Q8TDW7 4589 aa3.64□□□□□ -1.83
SPTBN1-204ENST00000467371 A0A0D9SG42 100 aa3.64□□□□□ -1.83
SPTBN1-204ENST00000467371 APOBP04114 4563 aaKnown RBP3.62□□□□□ -1.83
SPTBN1-204ENST00000467371 Q5VSD8 79 aa3.62□□□□□ -1.83
SPTBN1-204ENST00000467371 KIAA1109Q2LD37 5005 aa3.61□□□□□ -1.83
SPTBN1-204ENST00000467371 KRTAP12-1P59990 96 aa3.59□□□□□ -1.83
SPTBN1-204ENST00000467371 A0A1B0GVY2 172 aa3.56□□□□□ -1.84
SPTBN1-204ENST00000467371 RPS29P62273 56 aaKnown RBP3.56□□□□□ -1.84
SPTBN1-204ENST00000467371 RYR2Q92736 4967 aa3.55□□□□□ -1.84
SPTBN1-204ENST00000467371 RYR3Q15413 4870 aa3.54□□□□□ -1.84
SPTBN1-204ENST00000467371 RYR1P21817 5038 aa3.53□□□□□ -1.84
SPTBN1-204ENST00000467371 KRTAP17-1Q9BYP8 105 aa3.52□□□□□ -1.85
SPTBN1-204ENST00000467371 KRTAP10-4P60372 401 aaPredicted RBP3.51□□□□□ -1.85
SPTBN1-204ENST00000467371 PKHD1L1Q86WI1 4243 aa3.49□□□□□ -1.85
SPTBN1-204ENST00000467371 LCE1FQ5T754 118 aa3.49□□□□□ -1.85
SPTBN1-204ENST00000467371 HSPG2P98160 4391 aa3.48□□□□□ -1.85
SPTBN1-204ENST00000467371 EPPK1P58107 5090 aaKnown RBP3.48□□□□□ -1.85
SPTBN1-204ENST00000467371 LPAP08519 4548 aa3.47□□□□□ -1.85
SPTBN1-204ENST00000467371 SPRR5A0A1B0GTR4 108 aa3.47□□□□□ -1.85
SPTBN1-204ENST00000467371 LRP2P98164 4655 aa3.46□□□□□ -1.86
SPTBN1-204ENST00000467371 KRTAP4-5Q9BYR2 181 aa3.45□□□□□ -1.86
SPTBN1-204ENST00000467371 M0QZ58 72 aa3.44□□□□□ -1.86
SPTBN1-204ENST00000467371 ABCA13Q86UQ4 5058 aa3.44□□□□□ -1.86
SPTBN1-204ENST00000467371 MUC2Q02817 5179 aa3.4□□□□□ -1.86
SPTBN1-204ENST00000467371 LCE1AQ5T7P2 110 aa3.4□□□□□ -1.87
SPTBN1-204ENST00000467371 MT1HL1P0DM35 61 aa3.36□□□□□ -1.87
SPTBN1-204ENST00000467371 TNXBP22105 4242 aa3.36□□□□□ -1.87
SPTBN1-204ENST00000467371 MT3P25713 68 aa3.34□□□□□ -1.87
SPTBN1-204ENST00000467371 KRTAP19-1Q8IUB9 90 aa3.32□□□□□ -1.88
SPTBN1-204ENST00000467371 LCE3CQ5T5A8 94 aa3.3□□□□□ -1.88
SPTBN1-204ENST00000467371 LOC100996750A0A140TA64 210 aa3.28□□□□□ -1.88
SPTBN1-204ENST00000467371 KRTAP4-6Q9BYQ5 205 aa3.28□□□□□ -1.88
SPTBN1-204ENST00000467371 HERC2O95714 4834 aa3.28□□□□□ -1.88
SPTBN1-204ENST00000467371 KRTAP9-3Q9BYQ3 159 aa3.27□□□□□ -1.89
SPTBN1-204ENST00000467371 RNF213Q63HN8 5207 aa3.25□□□□□ -1.89
SPTBN1-204ENST00000467371 HERC1Q15751 4861 aa3.24□□□□□ -1.89
SPTBN1-204ENST00000467371 BIRC6Q9NR09 4857 aa3.21□□□□□ -1.9
SPTBN1-204ENST00000467371 KRTAP4-1Q9BYQ7 146 aa3.21□□□□□ -1.9
SPTBN1-204ENST00000467371 FAT4Q6V0I7 4981 aa3.21□□□□□ -1.9
SPTBN1-204ENST00000467371 PCLOQ9Y6V0 5065 aa3.17□□□□□ -1.9
SPTBN1-204ENST00000467371 M0R2T5 61 aa3.16□□□□□ -1.9
SPTBN1-204ENST00000467371 KRTAP6-3Q3LI67 103 aa3.14□□□□□ -1.91
SPTBN1-204ENST00000467371 LCE1EQ5T753 118 aa3.14□□□□□ -1.91
SPTBN1-204ENST00000467371 UBR4Q5T4S7 5183 aa3.12□□□□□ -1.91
SPTBN1-204ENST00000467371 KRTAP4-8Q9BYQ9 185 aa3.11□□□□□ -1.91
SPTBN1-204ENST00000467371 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.11□□□□□ -1.91
SPTBN1-204ENST00000467371 KRTAP9-2Q9BYQ4 174 aa3.1□□□□□ -1.91
SPTBN1-204ENST00000467371 KRTAP10-10P60014 251 aa3.09□□□□□ -1.91
SPTBN1-204ENST00000467371 KRTAP4-12Q9BQ66 201 aa3.09□□□□□ -1.91
SPTBN1-204ENST00000467371 LCE3EQ5T5B0 92 aa3.09□□□□□ -1.92
SPTBN1-204ENST00000467371 FLGP20930 4061 aaPredicted RBP3.06□□□□□ -1.92
SPTBN1-204ENST00000467371 TNP1P09430 55 aa3.05□□□□□ -1.92
SPTBN1-204ENST00000467371 HMCN2Q8NDA2 5059 aa3.04□□□□□ -1.92
SPTBN1-204ENST00000467371 MUC17Q685J3 4493 aa3.04□□□□□ -1.92
SPTBN1-204ENST00000467371 LCE1DQ5T752 114 aa3.04□□□□□ -1.92
SPTBN1-204ENST00000467371 KRTAP10-12P60413 245 aa3.02□□□□□ -1.93
SPTBN1-204ENST00000467371 LCE3BQ5TA77 95 aa2.98□□□□□ -1.93
SPTBN1-204ENST00000467371 KRTAP12-4P60329 112 aa2.97□□□□□ -1.93
SPTBN1-204ENST00000467371 KRTAP10-7P60409 375 aaPredicted RBP2.95□□□□□ -1.94
SPTBN1-204ENST00000467371 FSIP2Q5CZC0 6907 aa2.94□□□□□ -1.94
SPTBN1-204ENST00000467371 KRTAP19-2Q3LHN2 52 aa2.92□□□□□ -1.94
SPTBN1-204ENST00000467371 USH2AO75445 5202 aa2.91□□□□□ -1.94
SPTBN1-204ENST00000467371 KRTAP9-8Q9BYQ0 159 aa2.86□□□□□ -1.95
SPTBN1-204ENST00000467371 LCE3AQ5TA76 89 aa2.85□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms