RNA–Protein interactions for RNA: ENST00000466532.1

COL9A3-206, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 2

Gene COL9A3, Length 539 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-206ENST00000466532 KRTAP5-9P26371 169 aa8.34□□□□□ -1.07
COL9A3-206ENST00000466532 GTF2H5Q6ZYL4 71 aa8.34□□□□□ -1.07
COL9A3-206ENST00000466532 ETDBQ3ZM63 59 aa8.33□□□□□ -1.08
COL9A3-206ENST00000466532 F8W1H4 67 aa8.32□□□□□ -1.08
COL9A3-206ENST00000466532 KRTAP20-1Q3LI63 56 aa8.31□□□□□ -1.08
COL9A3-206ENST00000466532 KMT2DO14686 5537 aa8.26□□□□□ -1.09
COL9A3-206ENST00000466532 NDUFC1O43677 76 aa8.24□□□□□ -1.09
COL9A3-206ENST00000466532 MDN1Q9NU22 5596 aa8.24□□□□□ -1.09
COL9A3-206ENST00000466532 PCP4L1A6NKN8 68 aa8.23□□□□□ -1.09
COL9A3-206ENST00000466532 H0YAA0 97 aa8.22□□□□□ -1.09
COL9A3-206ENST00000466532 H0Y9P7 68 aa8.2□□□□□ -1.1
COL9A3-206ENST00000466532 UQCRQO14949 82 aa8.19□□□□□ -1.1
COL9A3-206ENST00000466532 ATOX1O00244 68 aa8.18□□□□□ -1.1
COL9A3-206ENST00000466532 HIST1H4AP62805 103 aaKnown RBP8.17□□□□□ -1.1
COL9A3-206ENST00000466532 ACYP1P07311 99 aa8.16□□□□□ -1.1
COL9A3-206ENST00000466532 ATP5EP2Q5VTU8 51 aa8.15□□□□□ -1.1
COL9A3-206ENST00000466532 ADM2Q7Z4H4 148 aa8.15□□□□□ -1.1
COL9A3-206ENST00000466532 A8MUN3 132 aa8.13□□□□□ -1.11
COL9A3-206ENST00000466532 FAM240AA0A1B0GVK7 77 aa8.09□□□□□ -1.11
COL9A3-206ENST00000466532 PRO2289Q9P1D8 64 aa8.09□□□□□ -1.11
COL9A3-206ENST00000466532 SPRR2FQ96RM1 72 aa8.06□□□□□ -1.12
COL9A3-206ENST00000466532 MT1XP80297 61 aa8.05□□□□□ -1.12
COL9A3-206ENST00000466532 LINC00208Q96KT6 92 aa8.04□□□□□ -1.12
COL9A3-206ENST00000466532 KRTAP2-3P0C7H8 128 aa8.03□□□□□ -1.12
COL9A3-206ENST00000466532 PLAC4Q8WY50 150 aa8.03□□□□□ -1.12
COL9A3-206ENST00000466532 KRTAP2-4Q9BYR9 128 aa8.03□□□□□ -1.12
COL9A3-206ENST00000466532 SPRR2EP22531 72 aa8□□□□□ -1.13
COL9A3-206ENST00000466532 SPRR2BP35325 72 aa8□□□□□ -1.13
COL9A3-206ENST00000466532 SPRR2AP35326 72 aa8□□□□□ -1.13
COL9A3-206ENST00000466532 R4GN34 69 aa7.97□□□□□ -1.13
COL9A3-206ENST00000466532 MP68P56378 58 aa7.95□□□□□ -1.14
COL9A3-206ENST00000466532 KRTAP8-1Q8IUC2 63 aa7.95□□□□□ -1.14
COL9A3-206ENST00000466532 LINC00643Q86TS7 51 aa7.94□□□□□ -1.14
COL9A3-206ENST00000466532 P0C880 135 aa7.93□□□□□ -1.14
COL9A3-206ENST00000466532 OCR1Q9BZK8 76 aa7.92□□□□□ -1.14
COL9A3-206ENST00000466532 C20orf197Q8N268 126 aa7.91□□□□□ -1.14
COL9A3-206ENST00000466532 M0QZ58 72 aa7.9□□□□□ -1.14
COL9A3-206ENST00000466532 KRTAP12-2P59991 146 aa7.9□□□□□ -1.14
COL9A3-206ENST00000466532 LCE1AQ5T7P2 110 aa7.84□□□□□ -1.15
COL9A3-206ENST00000466532 DMAC1Q96GE9 116 aa7.81□□□□□ -1.16
COL9A3-206ENST00000466532 LINC01554Q52M75 96 aa7.8□□□□□ -1.16
COL9A3-206ENST00000466532 KRTAP4-8A0A0G2JLE6 195 aa7.79□□□□□ -1.16
COL9A3-206ENST00000466532 H3BPC8 53 aa7.79□□□□□ -1.16
COL9A3-206ENST00000466532 KRTAP4-8Q9BYQ9 185 aa7.79□□□□□ -1.16
COL9A3-206ENST00000466532 A0A1B0GV90 55 aa7.76□□□□□ -1.17
COL9A3-206ENST00000466532 KRTAP2-2Q9BYT5 123 aa7.75□□□□□ -1.17
COL9A3-206ENST00000466532 KRTAP2-1Q9BYU5 128 aa7.75□□□□□ -1.17
COL9A3-206ENST00000466532 SPRR2DP22532 72 aa7.74□□□□□ -1.17
COL9A3-206ENST00000466532 KRTAP10-7P60409 375 aaPredicted RBP7.69□□□□□ -1.18
COL9A3-206ENST00000466532 SCGB1A1P11684 91 aa7.67□□□□□ -1.18
COL9A3-206ENST00000466532 TRAV7A0A075B6U4 112 aa7.64□□□□□ -1.19
COL9A3-206ENST00000466532 KRTAP10-12P60413 245 aa7.64□□□□□ -1.19
COL9A3-206ENST00000466532 MT-ATP8P03928 68 aa7.6□□□□□ -1.19
COL9A3-206ENST00000466532 ACYP2P14621 99 aa7.58□□□□□ -1.2
COL9A3-206ENST00000466532 J3QR89 54 aa7.56□□□□□ -1.2
COL9A3-206ENST00000466532 LCE3BQ5TA77 95 aa7.54□□□□□ -1.2
COL9A3-206ENST00000466532 SPTSSBQ8NFR3 76 aa7.54□□□□□ -1.2
COL9A3-206ENST00000466532 CHKB-CPT1BH3BT56 60 aa7.45□□□□□ -1.22
COL9A3-206ENST00000466532 SMIM20Q8N5G0 67 aa7.38□□□□□ -1.23
COL9A3-206ENST00000466532 KRTAP13-4Q3LI77 160 aa7.31□□□□□ -1.24
COL9A3-206ENST00000466532 CAMK2N1Q7Z7J9 78 aa7.3□□□□□ -1.24
COL9A3-206ENST00000466532 SNURFQ9Y675 71 aa7.29□□□□□ -1.24
COL9A3-206ENST00000466532 DSTQ03001 7570 aaKnown RBP7.26□□□□□ -1.25
COL9A3-206ENST00000466532 K7ERU9 68 aa7.25□□□□□ -1.25
COL9A3-206ENST00000466532 SPANXA2-OT1Q8N9U9 137 aa7.22□□□□□ -1.25
COL9A3-206ENST00000466532 KRTAP19-7Q3SYF9 63 aa7.2□□□□□ -1.26
COL9A3-206ENST00000466532 LCE5AQ5TCM9 118 aa7.19□□□□□ -1.26
COL9A3-206ENST00000466532 MT1EP04732 61 aa7.15□□□□□ -1.26
COL9A3-206ENST00000466532 GPR98Q8WXG9 6306 aa7.15□□□□□ -1.27
COL9A3-206ENST00000466532 KRTAP19-3Q7Z4W3 81 aa7.14□□□□□ -1.27
COL9A3-206ENST00000466532 KRTAP4-9Q9BYQ8 210 aa7.08□□□□□ -1.28
COL9A3-206ENST00000466532 A0A0D9SG42 100 aa7.07□□□□□ -1.28
COL9A3-206ENST00000466532 COA5Q86WW8 74 aa7.05□□□□□ -1.28
COL9A3-206ENST00000466532 SERP2Q8N6R1 65 aa7.05□□□□□ -1.28
COL9A3-206ENST00000466532 SEC61GP60059 68 aa7.02□□□□□ -1.29
COL9A3-206ENST00000466532 SERP1Q9Y6X1 66 aa7.02□□□□□ -1.29
COL9A3-206ENST00000466532 SPATA8Q6RVD6 105 aa7□□□□□ -1.29
COL9A3-206ENST00000466532 SPINT4Q6UDR6 99 aa7□□□□□ -1.29
COL9A3-206ENST00000466532 CYSTM1Q9H1C7 97 aa6.99□□□□□ -1.29
COL9A3-206ENST00000466532 KRTAP19-5Q3LI72 72 aa6.97□□□□□ -1.29
COL9A3-206ENST00000466532 MT1GP13640 62 aa6.94□□□□□ -1.3
COL9A3-206ENST00000466532 A0A1B0GU33 70 aa6.92□□□□□ -1.3
COL9A3-206ENST00000466532 KRTAP12-1P59990 96 aa6.9□□□□□ -1.3
COL9A3-206ENST00000466532 PP632Q6XCG6 107 aa6.9□□□□□ -1.3
COL9A3-206ENST00000466532 LCE1DQ5T752 114 aa6.88□□□□□ -1.31
COL9A3-206ENST00000466532 MT1MQ8N339 61 aa6.83□□□□□ -1.32
COL9A3-206ENST00000466532 LCE4AQ5TA78 99 aa6.81□□□□□ -1.32
COL9A3-206ENST00000466532 MT1LQ93083 61 aa6.79□□□□□ -1.32
COL9A3-206ENST00000466532 MT4P47944 62 aa6.78□□□□□ -1.32
COL9A3-206ENST00000466532 HMCN1Q96RW7 5635 aa6.78□□□□□ -1.32
COL9A3-206ENST00000466532 COX7CP15954 63 aa6.75□□□□□ -1.33
COL9A3-206ENST00000466532 SMIM26A0A096LP01 95 aa6.73□□□□□ -1.33
COL9A3-206ENST00000466532 H7BZZ5 65 aa6.72□□□□□ -1.33
COL9A3-206ENST00000466532 A0A1B0GU69 56 aa6.7□□□□□ -1.34
COL9A3-206ENST00000466532 LCE3AQ5TA76 89 aa6.7□□□□□ -1.34
COL9A3-206ENST00000466532 C10orf95Q9H7T3 257 aa6.7□□□□□ -1.34
COL9A3-206ENST00000466532 A8MU10 97 aa6.69□□□□□ -1.34
COL9A3-206ENST00000466532 KRTAP4-3Q9BYR4 195 aa6.69□□□□□ -1.34
COL9A3-206ENST00000466532 AHNAK2Q8IVF2 5795 aa6.65□□□□□ -1.34
COL9A3-206ENST00000466532 TNP1P09430 55 aa6.65□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 487.1 ms