RNA–Protein interactions for RNA: ENST00000466010.1

TPM3-214, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 461 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-214ENST00000466010 ZCCHC13Q8WW36 166 aaKnown RBP3.2□□□□□ -1.9
TPM3-214ENST00000466010 HRES1P13985 223 aa3.18□□□□□ -1.9
TPM3-214ENST00000466010 NREPQ16612 68 aa3.18□□□□□ -1.9
TPM3-214ENST00000466010 SPINK7P58062 85 aa3.17□□□□□ -1.9
TPM3-214ENST00000466010 C14orf132Q9NPU4 83 aa3.17□□□□□ -1.9
TPM3-214ENST00000466010 H3BT86 120 aa3.16□□□□□ -1.9
TPM3-214ENST00000466010 PRR15Q8IV56 129 aa3.16□□□□□ -1.9
TPM3-214ENST00000466010 IGKV3D-7A0A0C4DH55 119 aa3.15□□□□□ -1.91
TPM3-214ENST00000466010 TMEM254Q8TBM7 123 aa3.14□□□□□ -1.91
TPM3-214ENST00000466010 NAA38Q9BRA0 125 aaKnown RBP3.14□□□□□ -1.91
TPM3-214ENST00000466010 IMUPQ9GZP8 106 aa3.14□□□□□ -1.91
TPM3-214ENST00000466010 WFDC13Q8IUB5 93 aa3.13□□□□□ -1.91
TPM3-214ENST00000466010 MRPL34Q9BQ48 92 aaKnown RBP3.13□□□□□ -1.91
TPM3-214ENST00000466010 A0A1W2PPM0 123 aa3.12□□□□□ -1.91
TPM3-214ENST00000466010 hDV103S1A0JD37 113 aa3.12□□□□□ -1.91
TPM3-214ENST00000466010 MT2AP02795 61 aa3.12□□□□□ -1.91
TPM3-214ENST00000466010 SCGB1A1P11684 91 aa3.12□□□□□ -1.91
TPM3-214ENST00000466010 MMP24-AS1A0A0U1RRL7 71 aa3.11□□□□□ -1.91
TPM3-214ENST00000466010 KRTAP10-10P60014 251 aa3.11□□□□□ -1.91
TPM3-214ENST00000466010 LCA10Q71F78 164 aa3.1□□□□□ -1.91
TPM3-214ENST00000466010 LINC00846Q9NV44 126 aa3.1□□□□□ -1.91
TPM3-214ENST00000466010 K7EQZ3 153 aa3.09□□□□□ -1.91
TPM3-214ENST00000466010 TAX1BP3O14907 124 aa3.09□□□□□ -1.91
TPM3-214ENST00000466010 MT1FP04733 61 aa3.08□□□□□ -1.92
TPM3-214ENST00000466010 H1FX-AS1Q4G0G2 97 aa3.08□□□□□ -1.92
TPM3-214ENST00000466010 C7orf65Q6ZTY9 151 aa3.08□□□□□ -1.92
TPM3-214ENST00000466010 SPCS1Q9Y6A9 102 aa3.08□□□□□ -1.92
TPM3-214ENST00000466010 KRTAP10-5P60370 271 aa3.07□□□□□ -1.92
TPM3-214ENST00000466010 COL5A1-AS1Q5SY13 56 aa3.07□□□□□ -1.92
TPM3-214ENST00000466010 CASC2Q6XLA1 102 aa3.07□□□□□ -1.92
TPM3-214ENST00000466010 UBL5Q9BZL1 73 aa3.07□□□□□ -1.92
TPM3-214ENST00000466010 TRAV7A0A075B6U4 112 aa3.06□□□□□ -1.92
TPM3-214ENST00000466010 K7ERU9 68 aa3.06□□□□□ -1.92
TPM3-214ENST00000466010 USH2AO75445 5202 aa3.05□□□□□ -1.92
TPM3-214ENST00000466010 PRO0461Q9UI25 63 aa3.05□□□□□ -1.92
TPM3-214ENST00000466010 LINC01554Q52M75 96 aa3.04□□□□□ -1.92
TPM3-214ENST00000466010 KTN1-AS1Q86SY8 53 aa3.04□□□□□ -1.92
TPM3-214ENST00000466010 HCG22E2RYF7 251 aa3.03□□□□□ -1.92
TPM3-214ENST00000466010 K7EP34 96 aa3.02□□□□□ -1.93
TPM3-214ENST00000466010 KRTAP12-2P59991 146 aa3.02□□□□□ -1.93
TPM3-214ENST00000466010 GTF2H5Q6ZYL4 71 aa3.02□□□□□ -1.93
TPM3-214ENST00000466010 TP53AIP1Q9HCN2 124 aa3.02□□□□□ -1.93
TPM3-214ENST00000466010 SSPOA2VEC9 5147 aa3.02□□□□□ -1.93
TPM3-214ENST00000466010 F8W1H4 67 aa3□□□□□ -1.93
TPM3-214ENST00000466010 TMEM258P61165 79 aa2.99□□□□□ -1.93
TPM3-214ENST00000466010 LCE3EQ5T5B0 92 aa2.99□□□□□ -1.93
TPM3-214ENST00000466010 FCGBPQ9Y6R7 5405 aaPredicted RBP2.99□□□□□ -1.93
TPM3-214ENST00000466010 KRTAP19-6Q3LI70 58 aa2.98□□□□□ -1.93
TPM3-214ENST00000466010 ACYP1P07311 99 aa2.96□□□□□ -1.94
TPM3-214ENST00000466010 CSAG1Q6PB30 78 aa2.96□□□□□ -1.94
TPM3-214ENST00000466010 S4R3F8 94 aa2.96□□□□□ -1.94
TPM3-214ENST00000466010 SPRR5A0A1B0GTR4 108 aa2.95□□□□□ -1.94
TPM3-214ENST00000466010 FAM236AA0A1B0GUQ0 79 aa2.95□□□□□ -1.94
TPM3-214ENST00000466010 FAM236BA0A1B0GV22 79 aa2.95□□□□□ -1.94
TPM3-214ENST00000466010 LCE1EQ5T753 118 aa2.95□□□□□ -1.94
TPM3-214ENST00000466010 ATP5EP2Q5VTU8 51 aa2.95□□□□□ -1.94
TPM3-214ENST00000466010 ETDBQ3ZM63 59 aa2.94□□□□□ -1.94
TPM3-214ENST00000466010 MACF1Q9UPN3 7388 aaKnown RBP2.94□□□□□ -1.94
TPM3-214ENST00000466010 TRAV22A0A0B4J277 110 aa2.93□□□□□ -1.94
TPM3-214ENST00000466010 LOC101927531A0A1B0GV80 90 aa2.93□□□□□ -1.94
TPM3-214ENST00000466010 SYNE2Q8WXH0 6885 aaKnown RBP2.92□□□□□ -1.94
TPM3-214ENST00000466010 J3QR89 54 aa2.92□□□□□ -1.94
TPM3-214ENST00000466010 ATOX1O00244 68 aa2.92□□□□□ -1.94
TPM3-214ENST00000466010 P0C880 135 aa2.92□□□□□ -1.94
TPM3-214ENST00000466010 PRO2289Q9P1D8 64 aa2.92□□□□□ -1.94
TPM3-214ENST00000466010 CYP4F30PQ9H0H9 118 aa2.91□□□□□ -1.94
TPM3-214ENST00000466010 CRIPTQ9P021 101 aa2.9□□□□□ -1.95
TPM3-214ENST00000466010 UQCRQO14949 82 aa2.89□□□□□ -1.95
TPM3-214ENST00000466010 RPS28P62857 69 aaKnown RBP2.89□□□□□ -1.95
TPM3-214ENST00000466010 Q5VV11 94 aa2.89□□□□□ -1.95
TPM3-214ENST00000466010 SPRR2GQ9BYE4 73 aa2.89□□□□□ -1.95
TPM3-214ENST00000466010 KLKP1Q107X0 134 aa2.88□□□□□ -1.95
TPM3-214ENST00000466010 A6NN06 94 aa2.86□□□□□ -1.95
TPM3-214ENST00000466010 NDUFC1O43677 76 aa2.86□□□□□ -1.95
TPM3-214ENST00000466010 H0Y9P7 68 aa2.85□□□□□ -1.95
TPM3-214ENST00000466010 H0YAA0 97 aa2.85□□□□□ -1.95
TPM3-214ENST00000466010 KRTAP10-7P60409 375 aaPredicted RBP2.85□□□□□ -1.95
TPM3-214ENST00000466010 KRTAP19-8Q3LI54 63 aa2.85□□□□□ -1.95
TPM3-214ENST00000466010 KRTAP6-3Q3LI67 103 aa2.85□□□□□ -1.95
TPM3-214ENST00000466010 LINC00643Q86TS7 51 aa2.85□□□□□ -1.95
TPM3-214ENST00000466010 MT1BP07438 61 aa2.82□□□□□ -1.96
TPM3-214ENST00000466010 C20orf197Q8N268 126 aa2.8□□□□□ -1.96
TPM3-214ENST00000466010 LINC00208Q96KT6 92 aa2.8□□□□□ -1.96
TPM3-214ENST00000466010 CCDC179H3BU77 68 aa2.79□□□□□ -1.96
TPM3-214ENST00000466010 MT-ATP8P03928 68 aa2.79□□□□□ -1.96
TPM3-214ENST00000466010 A0A087WVE0 104 aa2.78□□□□□ -1.96
TPM3-214ENST00000466010 DMAC1Q96GE9 116 aa2.74□□□□□ -1.97
TPM3-214ENST00000466010 NEBP20929 6669 aa2.73□□□□□ -1.97
TPM3-214ENST00000466010 Q1T7F1 81 aa2.73□□□□□ -1.97
TPM3-214ENST00000466010 PLAC4Q8WY50 150 aa2.73□□□□□ -1.97
TPM3-214ENST00000466010 KRTAP5-9P26371 169 aa2.72□□□□□ -1.97
TPM3-214ENST00000466010 KRTAP9-6A8MVA2 160 aa2.71□□□□□ -1.98
TPM3-214ENST00000466010 SPTSSBQ8NFR3 76 aa2.71□□□□□ -1.98
TPM3-214ENST00000466010 ROMO1P60602 79 aa2.7□□□□□ -1.98
TPM3-214ENST00000466010 BRK1Q8WUW1 75 aa2.7□□□□□ -1.98
TPM3-214ENST00000466010 ACYP2P14621 99 aa2.69□□□□□ -1.98
TPM3-214ENST00000466010 M0QZ58 72 aa2.68□□□□□ -1.98
TPM3-214ENST00000466010 COX7CP15954 63 aa2.68□□□□□ -1.98
TPM3-214ENST00000466010 COA5Q86WW8 74 aa2.67□□□□□ -1.98
TPM3-214ENST00000466010 KMT2DO14686 5537 aa2.67□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms