RNA–Protein interactions for RNA: ENST00000465421.5

SIK3-207, Transcript of SIK family kinase 3, humanhuman

TSL 2

Gene SIK3, Length 3,459 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIK3-207ENST00000465421 SMR3BP02814 79 aaPredicted RBP3.48□□□□□ -1.85
SIK3-207ENST00000465421 RYR2Q92736 4967 aa3.48□□□□□ -1.85
SIK3-207ENST00000465421 LUZP6Q538Z0 58 aa3.47□□□□□ -1.85
SIK3-207ENST00000465421 COX6B2Q6YFQ2 88 aa3.46□□□□□ -1.86
SIK3-207ENST00000465421 KRTAP10-4P60372 401 aaPredicted RBP3.45□□□□□ -1.86
SIK3-207ENST00000465421 K7ERS5 55 aa3.44□□□□□ -1.86
SIK3-207ENST00000465421 TPRXLQ17RH7 258 aa3.44□□□□□ -1.86
SIK3-207ENST00000465421 SPINT4Q6UDR6 99 aa3.43□□□□□ -1.86
SIK3-207ENST00000465421 TNXBP22105 4242 aa3.41□□□□□ -1.86
SIK3-207ENST00000465421 C10orf95Q9H7T3 257 aa3.4□□□□□ -1.86
SIK3-207ENST00000465421 HSPG2P98160 4391 aa3.4□□□□□ -1.87
SIK3-207ENST00000465421 KRTAP10-6P60371 365 aaPredicted RBP3.39□□□□□ -1.87
SIK3-207ENST00000465421 RPL37P61927 97 aaKnown RBP3.39□□□□□ -1.87
SIK3-207ENST00000465421 KRTAP13-4Q3LI77 160 aa3.39□□□□□ -1.87
SIK3-207ENST00000465421 KMT2CQ8NEZ4 4911 aaKnown RBP3.38□□□□□ -1.87
SIK3-207ENST00000465421 NDUFAF8A1L188 74 aa3.36□□□□□ -1.87
SIK3-207ENST00000465421 FAT1Q14517 4588 aa3.36□□□□□ -1.87
SIK3-207ENST00000465421 KRTAP3-3Q9BYR6 98 aa3.35□□□□□ -1.87
SIK3-207ENST00000465421 KRTAP3-2Q9BYR7 98 aa3.35□□□□□ -1.87
SIK3-207ENST00000465421 Q5VSD8 79 aa3.34□□□□□ -1.87
SIK3-207ENST00000465421 RYR3Q15413 4870 aa3.33□□□□□ -1.88
SIK3-207ENST00000465421 KRTAP23-1A1A580 65 aa3.32□□□□□ -1.88
SIK3-207ENST00000465421 FAT3Q8TDW7 4589 aa3.32□□□□□ -1.88
SIK3-207ENST00000465421 MYCBP2O75592 4640 aa3.29□□□□□ -1.88
SIK3-207ENST00000465421 KRTAP12-2P59991 146 aa3.29□□□□□ -1.88
SIK3-207ENST00000465421 S4R3F8 94 aa3.29□□□□□ -1.88
SIK3-207ENST00000465421 KRTAP10-8P60410 259 aa3.28□□□□□ -1.88
SIK3-207ENST00000465421 RYR1P21817 5038 aa3.28□□□□□ -1.88
SIK3-207ENST00000465421 CAMK2N1Q7Z7J9 78 aa3.27□□□□□ -1.89
SIK3-207ENST00000465421 LRP1Q07954 4544 aaKnown RBP3.27□□□□□ -1.89
SIK3-207ENST00000465421 XP32Q5T750 250 aa3.27□□□□□ -1.89
SIK3-207ENST00000465421 KRTAP12-1P59990 96 aa3.25□□□□□ -1.89
SIK3-207ENST00000465421 BIRC6Q9NR09 4857 aa3.21□□□□□ -1.89
SIK3-207ENST00000465421 EPPK1P58107 5090 aaKnown RBP3.2□□□□□ -1.9
SIK3-207ENST00000465421 MT1HL1P0DM35 61 aa3.2□□□□□ -1.9
SIK3-207ENST00000465421 KRTAP17-1Q9BYP8 105 aa3.19□□□□□ -1.9
SIK3-207ENST00000465421 HERC2O95714 4834 aa3.16□□□□□ -1.9
SIK3-207ENST00000465421 KIAA1109Q2LD37 5005 aa3.16□□□□□ -1.9
SIK3-207ENST00000465421 M0QZ58 72 aa3.13□□□□□ -1.91
SIK3-207ENST00000465421 KRTAP4-5Q9BYR2 181 aa3.13□□□□□ -1.91
SIK3-207ENST00000465421 PRO2289Q9P1D8 64 aa3.13□□□□□ -1.91
SIK3-207ENST00000465421 MUC17Q685J3 4493 aa3.12□□□□□ -1.91
SIK3-207ENST00000465421 PLAC4Q8WY50 150 aa3.11□□□□□ -1.91
SIK3-207ENST00000465421 LPAP08519 4548 aa3.1□□□□□ -1.91
SIK3-207ENST00000465421 R4GN34 69 aa3.08□□□□□ -1.92
SIK3-207ENST00000465421 LCE2AQ5TA79 106 aaPredicted RBP3.07□□□□□ -1.92
SIK3-207ENST00000465421 LCE2DQ5TA82 110 aaPredicted RBP3.07□□□□□ -1.92
SIK3-207ENST00000465421 LRP2P98164 4655 aa3.06□□□□□ -1.92
SIK3-207ENST00000465421 ABCA13Q86UQ4 5058 aa3.03□□□□□ -1.92
SIK3-207ENST00000465421 LCE2CQ5TA81 110 aa3.03□□□□□ -1.92
SIK3-207ENST00000465421 LORP23490 312 aaPredicted RBP3□□□□□ -1.93
SIK3-207ENST00000465421 PP632Q6XCG6 107 aa2.97□□□□□ -1.93
SIK3-207ENST00000465421 PCLOQ9Y6V0 5065 aa2.97□□□□□ -1.93
SIK3-207ENST00000465421 KRTAP19-2Q3LHN2 52 aa2.96□□□□□ -1.94
SIK3-207ENST00000465421 SPRR5A0A1B0GTR4 108 aa2.95□□□□□ -1.94
SIK3-207ENST00000465421 INE1O15225 51 aa2.91□□□□□ -1.94
SIK3-207ENST00000465421 KRTAP4-1Q9BYQ7 146 aa2.9□□□□□ -1.94
SIK3-207ENST00000465421 HERC1Q15751 4861 aa2.88□□□□□ -1.95
SIK3-207ENST00000465421 MUC2Q02817 5179 aa2.88□□□□□ -1.95
SIK3-207ENST00000465421 FLGP20930 4061 aaPredicted RBP2.88□□□□□ -1.95
SIK3-207ENST00000465421 HMCN2Q8NDA2 5059 aa2.87□□□□□ -1.95
SIK3-207ENST00000465421 LCE2BO14633 110 aa2.86□□□□□ -1.95
SIK3-207ENST00000465421 TNP1P09430 55 aa2.79□□□□□ -1.96
SIK3-207ENST00000465421 FAT4Q6V0I7 4981 aa2.73□□□□□ -1.97
SIK3-207ENST00000465421 M0R2T5 61 aa2.71□□□□□ -1.98
SIK3-207ENST00000465421 MT1HP80294 61 aa2.69□□□□□ -1.98
SIK3-207ENST00000465421 SPRR2GQ9BYE4 73 aa2.68□□□□□ -1.98
SIK3-207ENST00000465421 RNF213Q63HN8 5207 aa2.68□□□□□ -1.98
SIK3-207ENST00000465421 LCE3AQ5TA76 89 aa2.65□□□□□ -1.99
SIK3-207ENST00000465421 UBR4Q5T4S7 5183 aa2.65□□□□□ -1.99
SIK3-207ENST00000465421 KRTAP19-1Q8IUB9 90 aa2.63□□□□□ -1.99
SIK3-207ENST00000465421 KRTAP19-8Q3LI54 63 aa2.61□□□□□ -1.99
SIK3-207ENST00000465421 KRTAP9-8Q9BYQ0 159 aa2.6□□□□□ -1.99
SIK3-207ENST00000465421 MT2AP02795 61 aa2.59□□□□□ -1.99
SIK3-207ENST00000465421 KRTAP8-1Q8IUC2 63 aa2.59□□□□□ -1.99
SIK3-207ENST00000465421 KRTAP10-10P60014 251 aa2.59□□□□□ -2
SIK3-207ENST00000465421 KRTAP2-2Q9BYT5 123 aa2.58□□□□□ -2
SIK3-207ENST00000465421 MT1FP04733 61 aa2.57□□□□□ -2
SIK3-207ENST00000465421 KRTAP10-12P60413 245 aa2.55□□□□□ -2
SIK3-207ENST00000465421 MT1BP07438 61 aa2.51□□□□□ -2.01
SIK3-207ENST00000465421 KRTAP9-3Q9BYQ3 159 aa2.51□□□□□ -2.01
SIK3-207ENST00000465421 KRTAP12-3P60328 96 aa2.49□□□□□ -2.01
SIK3-207ENST00000465421 KRTAP10-5P60370 271 aa2.48□□□□□ -2.01
SIK3-207ENST00000465421 MT1XP80297 61 aa2.47□□□□□ -2.01
SIK3-207ENST00000465421 KMT2DO14686 5537 aa2.46□□□□□ -2.02
SIK3-207ENST00000465421 USH2AO75445 5202 aa2.44□□□□□ -2.02
SIK3-207ENST00000465421 KRTAP10-7P60409 375 aaPredicted RBP2.44□□□□□ -2.02
SIK3-207ENST00000465421 LCE5AQ5TCM9 118 aa2.39□□□□□ -2.03
SIK3-207ENST00000465421 LCE3CQ5T5A8 94 aa2.38□□□□□ -2.03
SIK3-207ENST00000465421 KRTAP2-3P0C7H8 128 aa2.36□□□□□ -2.03
SIK3-207ENST00000465421 KRTAP19-5Q3LI72 72 aa2.36□□□□□ -2.03
SIK3-207ENST00000465421 KRTAP2-4Q9BYR9 128 aa2.36□□□□□ -2.03
SIK3-207ENST00000465421 KRTAP2-1Q9BYU5 128 aa2.36□□□□□ -2.03
SIK3-207ENST00000465421 KRTAP9-6A8MVA2 160 aa2.35□□□□□ -2.03
SIK3-207ENST00000465421 KRTAP19-6Q3LI70 58 aa2.35□□□□□ -2.03
SIK3-207ENST00000465421 KRTAP4-8A0A0G2JLE6 195 aa2.33□□□□□ -2.04
SIK3-207ENST00000465421 KRTAP4-8Q9BYQ9 185 aa2.33□□□□□ -2.04
SIK3-207ENST00000465421 KRTAP4-7Q9BYR0 210 aa2.33□□□□□ -2.04
SIK3-207ENST00000465421 KRTAP9-2Q9BYQ4 174 aa2.3□□□□□ -2.04
SIK3-207ENST00000465421 FSIP2Q5CZC0 6907 aa2.3□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 191.3 ms