RNA–Protein interactions for RNA: ENST00000465089.2

PBX1-204, Transcript of PBX homeobox 1, humanhuman

TSL 1 (best)

Gene PBX1, Length 11,321 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBX1-204ENST00000465089 MUC3AQ02505 3323 aa2.67□□□□□ -1.98
PBX1-204ENST00000465089 SMG1Q96Q15 3661 aaKnown RBP2.67□□□□□ -1.98
PBX1-204ENST00000465089 SPRR2FQ96RM1 72 aa2.67□□□□□ -1.98
PBX1-204ENST00000465089 LCE3EQ5T5B0 92 aa2.67□□□□□ -1.98
PBX1-204ENST00000465089 SPRR5A0A1B0GTR4 108 aa2.65□□□□□ -1.98
PBX1-204ENST00000465089 MT1FP04733 61 aa2.64□□□□□ -1.99
PBX1-204ENST00000465089 LCE2CQ5TA81 110 aa2.62□□□□□ -1.99
PBX1-204ENST00000465089 KRTAP19-8Q3LI54 63 aa2.62□□□□□ -1.99
PBX1-204ENST00000465089 MT1LQ93083 61 aa2.62□□□□□ -1.99
PBX1-204ENST00000465089 DMDP11532 3685 aa2.59□□□□□ -1.99
PBX1-204ENST00000465089 MT2AP02795 61 aa2.56□□□□□ -2
PBX1-204ENST00000465089 MT1HP80294 61 aa2.55□□□□□ -2
PBX1-204ENST00000465089 CSMD2Q7Z408 3487 aa2.55□□□□□ -2
PBX1-204ENST00000465089 MT1EP04732 61 aa2.54□□□□□ -2
PBX1-204ENST00000465089 SPRR2DP22532 72 aa2.53□□□□□ -2
PBX1-204ENST00000465089 LAMA5O15230 3695 aa2.52□□□□□ -2.01
PBX1-204ENST00000465089 CSMD1Q96PZ7 3565 aa2.52□□□□□ -2.01
PBX1-204ENST00000465089 AKAP9Q99996 3911 aa2.5□□□□□ -2.01
PBX1-204ENST00000465089 CUBNO60494 3623 aa2.49□□□□□ -2.01
PBX1-204ENST00000465089 SPRR2EP22531 72 aa2.49□□□□□ -2.01
PBX1-204ENST00000465089 VPS13CQ709C8 3753 aa2.48□□□□□ -2.01
PBX1-204ENST00000465089 KRTAP19-5Q3LI72 72 aa2.47□□□□□ -2.01
PBX1-204ENST00000465089 TRRAPQ9Y4A5 3859 aa2.46□□□□□ -2.02
PBX1-204ENST00000465089 MT1AP04731 61 aa2.44□□□□□ -2.02
PBX1-204ENST00000465089 MT1BP07438 61 aa2.42□□□□□ -2.02
PBX1-204ENST00000465089 MT1MQ8N339 61 aa2.42□□□□□ -2.02
PBX1-204ENST00000465089 LCE1AQ5T7P2 110 aa2.41□□□□□ -2.02
PBX1-204ENST00000465089 KRTAP19-3Q7Z4W3 81 aa2.4□□□□□ -2.02
PBX1-204ENST00000465089 SVEP1Q4LDE5 3571 aa2.39□□□□□ -2.03
PBX1-204ENST00000465089 BSNQ9UPA5 3926 aa2.38□□□□□ -2.03
PBX1-204ENST00000465089 MT1XP80297 61 aa2.38□□□□□ -2.03
PBX1-204ENST00000465089 LCE4AQ5TA78 99 aa2.32□□□□□ -2.04
PBX1-204ENST00000465089 LCE3BQ5TA77 95 aa2.31□□□□□ -2.04
PBX1-204ENST00000465089 LCE2DQ5TA82 110 aaPredicted RBP2.28□□□□□ -2.05
PBX1-204ENST00000465089 KRTAP19-6Q3LI70 58 aa2.26□□□□□ -2.05
PBX1-204ENST00000465089 ANK2Q01484 3957 aa2.25□□□□□ -2.05
PBX1-204ENST00000465089 DNAH7Q8WXX0 4024 aa2.23□□□□□ -2.05
PBX1-204ENST00000465089 KRTAP19-1Q8IUB9 90 aa2.23□□□□□ -2.05
PBX1-204ENST00000465089 FRAS1Q86XX4 4008 aa2.23□□□□□ -2.05
PBX1-204ENST00000465089 HECTD4Q9Y4D8 3996 aa2.21□□□□□ -2.06
PBX1-204ENST00000465089 CSMD3Q7Z407 3707 aa2.2□□□□□ -2.06
PBX1-204ENST00000465089 ALMS1Q8TCU4 4167 aa2.18□□□□□ -2.06
PBX1-204ENST00000465089 LYSTQ99698 3801 aa2.16□□□□□ -2.06
PBX1-204ENST00000465089 CMYA5Q8N3K9 4069 aa2.16□□□□□ -2.06
PBX1-204ENST00000465089 ZNF469Q96JG9 3925 aaPredicted RBP2.15□□□□□ -2.07
PBX1-204ENST00000465089 DNAH3Q8TD57 4116 aa2.14□□□□□ -2.07
PBX1-204ENST00000465089 VPS13BQ7Z7G8 4022 aa2.14□□□□□ -2.07
PBX1-204ENST00000465089 DNAH1Q9P2D7 4330 aa2.09□□□□□ -2.07
PBX1-204ENST00000465089 KMT2AQ03164 3969 aa2.09□□□□□ -2.07
PBX1-204ENST00000465089 PRM1P04553 51 aa2.08□□□□□ -2.08
PBX1-204ENST00000465089 KRTAP2-3P0C7H8 128 aa2.08□□□□□ -2.08
PBX1-204ENST00000465089 KRTAP2-4Q9BYR9 128 aa2.08□□□□□ -2.08
PBX1-204ENST00000465089 KRTAP2-1Q9BYU5 128 aa2.08□□□□□ -2.08
PBX1-204ENST00000465089 KRTAP9-8Q9BYQ0 159 aa2.08□□□□□ -2.08
PBX1-204ENST00000465089 HUWE1Q7Z6Z7 4374 aaKnown RBP2.06□□□□□ -2.08
PBX1-204ENST00000465089 DNAH6Q9C0G6 4158 aa2.04□□□□□ -2.08
PBX1-204ENST00000465089 KRTAP9-3Q9BYQ3 159 aa2.03□□□□□ -2.08
PBX1-204ENST00000465089 KRTAP6-3Q3LI67 103 aa2.02□□□□□ -2.09
PBX1-204ENST00000465089 ANK3Q12955 4377 aaKnown RBP2.01□□□□□ -2.09
PBX1-204ENST00000465089 KRTAP20-1Q3LI63 56 aa2.01□□□□□ -2.09
PBX1-204ENST00000465089 FLGP20930 4061 aaPredicted RBP2□□□□□ -2.09
PBX1-204ENST00000465089 KRTAP9-9Q9BYP9 154 aa1.99□□□□□ -2.09
PBX1-204ENST00000465089 KRTAP4-5Q9BYR2 181 aa1.99□□□□□ -2.09
PBX1-204ENST00000465089 LCE1DQ5T752 114 aa1.98□□□□□ -2.09
PBX1-204ENST00000465089 KRTAP9-6A8MVA2 160 aa1.97□□□□□ -2.09
PBX1-204ENST00000465089 DNAH2Q9P225 4427 aa1.96□□□□□ -2.1
PBX1-204ENST00000465089 KRTAP2-2Q9BYT5 123 aa1.95□□□□□ -2.1
PBX1-204ENST00000465089 KRTAP4-1Q9BYQ7 146 aa1.92□□□□□ -2.1
PBX1-204ENST00000465089 LCE2AQ5TA79 106 aaPredicted RBP1.91□□□□□ -2.1
PBX1-204ENST00000465089 KRTAP9-4Q9BYQ2 154 aa1.9□□□□□ -2.11
PBX1-204ENST00000465089 PRKDCP78527 4128 aaKnown RBP1.89□□□□□ -2.11
PBX1-204ENST00000465089 LCE5AQ5TCM9 118 aa1.88□□□□□ -2.11
PBX1-204ENST00000465089 LCE1BQ5T7P3 118 aa1.88□□□□□ -2.11
PBX1-204ENST00000465089 VPS13DQ5THJ4 4388 aa1.88□□□□□ -2.11
PBX1-204ENST00000465089 LCE1EQ5T753 118 aa1.87□□□□□ -2.11
PBX1-204ENST00000465089 DNAH10Q8IVF4 4471 aa1.84□□□□□ -2.11
PBX1-204ENST00000465089 MT4P47944 62 aa1.82□□□□□ -2.12
PBX1-204ENST00000465089 DNAH9Q9NYC9 4486 aa1.82□□□□□ -2.12
PBX1-204ENST00000465089 DNAH11Q96DT5 4516 aa1.82□□□□□ -2.12
PBX1-204ENST00000465089 DYNC2H1Q8NCM8 4307 aaKnown RBP1.8□□□□□ -2.12
PBX1-204ENST00000465089 KRTAP17-1Q9BYP8 105 aa1.8□□□□□ -2.12
PBX1-204ENST00000465089 KRTAP9-2Q9BYQ4 174 aa1.79□□□□□ -2.12
PBX1-204ENST00000465089 LCE1CQ5T751 118 aa1.78□□□□□ -2.13
PBX1-204ENST00000465089 LCE1FQ5T754 118 aa1.78□□□□□ -2.13
PBX1-204ENST00000465089 DNAH17Q9UFH2 4485 aa1.77□□□□□ -2.13
PBX1-204ENST00000465089 FAT2Q9NYQ8 4349 aa1.76□□□□□ -2.13
PBX1-204ENST00000465089 DYNC1H1Q14204 4646 aaKnown RBP1.76□□□□□ -2.13
PBX1-204ENST00000465089 KRTAP6-2Q3LI66 62 aa1.76□□□□□ -2.13
PBX1-204ENST00000465089 KRTAP9-6A0A140TA67 174 aa1.76□□□□□ -2.13
PBX1-204ENST00000465089 KRTAP9-7A8MTY7 169 aa1.75□□□□□ -2.13
PBX1-204ENST00000465089 PKHD1L1Q86WI1 4243 aa1.75□□□□□ -2.13
PBX1-204ENST00000465089 DNAH8Q96JB1 4490 aa1.75□□□□□ -2.13
PBX1-204ENST00000465089 KRTAP19-7Q3SYF9 63 aa1.74□□□□□ -2.13
PBX1-204ENST00000465089 SACSQ9NZJ4 4579 aa1.71□□□□□ -2.14
PBX1-204ENST00000465089 PKHD1P08F94 4074 aa1.71□□□□□ -2.14
PBX1-204ENST00000465089 KRTAP5-9P26371 169 aa1.7□□□□□ -2.14
PBX1-204ENST00000465089 KRTAP4-8A0A0G2JLE6 195 aa1.69□□□□□ -2.14
PBX1-204ENST00000465089 KRTAP4-8Q9BYQ9 185 aa1.69□□□□□ -2.14
PBX1-204ENST00000465089 RYR1P21817 5038 aa1.68□□□□□ -2.14
PBX1-204ENST00000465089 HSPG2P98160 4391 aa1.68□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 57.4 ms