RNA–Protein interactions for RNA: ENST00000465073.6

USP42-205, Transcript of ubiquitin specific peptidase 42, humanhuman

TSL 5

Gene USP42, Length 1,490 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-205ENST00000465073 LOC101927531A0A1B0GV80 90 aa9.79□□□□□ -0.84
USP42-205ENST00000465073 COL5A1-AS1Q5SY13 56 aa9.79□□□□□ -0.84
USP42-205ENST00000465073 TRAV22A0A0B4J277 110 aa9.77□□□□□ -0.85
USP42-205ENST00000465073 LOC105371267A0A1B0GV96 52 aa9.75□□□□□ -0.85
USP42-205ENST00000465073 H0YAA0 97 aa9.74□□□□□ -0.85
USP42-205ENST00000465073 NDUFC1O43677 76 aa9.73□□□□□ -0.85
USP42-205ENST00000465073 KRTAP2-3P0C7H8 128 aa9.7□□□□□ -0.86
USP42-205ENST00000465073 KRTAP2-4Q9BYR9 128 aa9.7□□□□□ -0.86
USP42-205ENST00000465073 PRO2289Q9P1D8 64 aa9.66□□□□□ -0.86
USP42-205ENST00000465073 F8W1H4 67 aa9.65□□□□□ -0.87
USP42-205ENST00000465073 GTF2H5Q6ZYL4 71 aa9.65□□□□□ -0.87
USP42-205ENST00000465073 ETDBQ3ZM63 59 aa9.64□□□□□ -0.87
USP42-205ENST00000465073 SPRR2FQ96RM1 72 aa9.63□□□□□ -0.87
USP42-205ENST00000465073 A8MUN3 132 aa9.61□□□□□ -0.87
USP42-205ENST00000465073 ADM2Q7Z4H4 148 aa9.6□□□□□ -0.87
USP42-205ENST00000465073 UQCRQO14949 82 aa9.59□□□□□ -0.87
USP42-205ENST00000465073 ATOX1O00244 68 aa9.59□□□□□ -0.87
USP42-205ENST00000465073 ACYP1P07311 99 aa9.58□□□□□ -0.88
USP42-205ENST00000465073 SPRR2EP22531 72 aa9.58□□□□□ -0.88
USP42-205ENST00000465073 SPRR2BP35325 72 aa9.58□□□□□ -0.88
USP42-205ENST00000465073 SPRR2AP35326 72 aa9.58□□□□□ -0.88
USP42-205ENST00000465073 MT1XP80297 61 aa9.57□□□□□ -0.88
USP42-205ENST00000465073 H0Y9P7 68 aa9.56□□□□□ -0.88
USP42-205ENST00000465073 PLAC4Q8WY50 150 aa9.53□□□□□ -0.88
USP42-205ENST00000465073 ATP5EP2Q5VTU8 51 aa9.49□□□□□ -0.89
USP42-205ENST00000465073 KRTAP8-1Q8IUC2 63 aa9.49□□□□□ -0.89
USP42-205ENST00000465073 HIST1H4AP62805 103 aaKnown RBP9.48□□□□□ -0.89
USP42-205ENST00000465073 KRTAP12-2P59991 146 aa9.43□□□□□ -0.9
USP42-205ENST00000465073 LCE1AQ5T7P2 110 aa9.41□□□□□ -0.9
USP42-205ENST00000465073 R4GN34 69 aa9.4□□□□□ -0.9
USP42-205ENST00000465073 FAM240AA0A1B0GVK7 77 aa9.4□□□□□ -0.91
USP42-205ENST00000465073 LINC00208Q96KT6 92 aa9.39□□□□□ -0.91
USP42-205ENST00000465073 KRTAP2-2Q9BYT5 123 aa9.37□□□□□ -0.91
USP42-205ENST00000465073 KRTAP2-1Q9BYU5 128 aa9.37□□□□□ -0.91
USP42-205ENST00000465073 C20orf197Q8N268 126 aa9.36□□□□□ -0.91
USP42-205ENST00000465073 P0C880 135 aa9.33□□□□□ -0.92
USP42-205ENST00000465073 M0QZ58 72 aa9.3□□□□□ -0.92
USP42-205ENST00000465073 MP68P56378 58 aa9.28□□□□□ -0.92
USP42-205ENST00000465073 SPRR2DP22532 72 aa9.27□□□□□ -0.93
USP42-205ENST00000465073 KRTAP4-8A0A0G2JLE6 195 aa9.26□□□□□ -0.93
USP42-205ENST00000465073 KRTAP4-8Q9BYQ9 185 aa9.26□□□□□ -0.93
USP42-205ENST00000465073 LINC00643Q86TS7 51 aa9.23□□□□□ -0.93
USP42-205ENST00000465073 OCR1Q9BZK8 76 aa9.22□□□□□ -0.93
USP42-205ENST00000465073 H3BS24 57 aa9.21□□□□□ -0.94
USP42-205ENST00000465073 PCP4L1A6NKN8 68 aa9.2□□□□□ -0.94
USP42-205ENST00000465073 LINC01554Q52M75 96 aa9.19□□□□□ -0.94
USP42-205ENST00000465073 DMAC1Q96GE9 116 aa9.15□□□□□ -0.95
USP42-205ENST00000465073 KRTAP10-7P60409 375 aaPredicted RBP9.12□□□□□ -0.95
USP42-205ENST00000465073 H3BPC8 53 aa9.11□□□□□ -0.95
USP42-205ENST00000465073 KRTAP10-12P60413 245 aa9.09□□□□□ -0.95
USP42-205ENST00000465073 LCE3BQ5TA77 95 aa9.04□□□□□ -0.96
USP42-205ENST00000465073 TRAV7A0A075B6U4 112 aa8.96□□□□□ -0.97
USP42-205ENST00000465073 MT-ATP8P03928 68 aa8.94□□□□□ -0.98
USP42-205ENST00000465073 SCGB1A1P11684 91 aa8.9□□□□□ -0.98
USP42-205ENST00000465073 ACYP2P14621 99 aa8.87□□□□□ -0.99
USP42-205ENST00000465073 SPTSSBQ8NFR3 76 aa8.85□□□□□ -0.99
USP42-205ENST00000465073 J3QR89 54 aa8.72□□□□□ -1.01
USP42-205ENST00000465073 CHKB-CPT1BH3BT56 60 aa8.7□□□□□ -1.02
USP42-205ENST00000465073 A0A1B0GV90 55 aa8.65□□□□□ -1.02
USP42-205ENST00000465073 CAMK2N1Q7Z7J9 78 aa8.6□□□□□ -1.03
USP42-205ENST00000465073 GPR98Q8WXG9 6306 aa8.6□□□□□ -1.03
USP42-205ENST00000465073 LCE5AQ5TCM9 118 aa8.59□□□□□ -1.03
USP42-205ENST00000465073 DSTQ03001 7570 aaKnown RBP8.58□□□□□ -1.04
USP42-205ENST00000465073 SMIM20Q8N5G0 67 aa8.57□□□□□ -1.04
USP42-205ENST00000465073 KRTAP19-7Q3SYF9 63 aa8.56□□□□□ -1.04
USP42-205ENST00000465073 KRTAP13-4Q3LI77 160 aa8.55□□□□□ -1.04
USP42-205ENST00000465073 KRTAP19-3Q7Z4W3 81 aa8.51□□□□□ -1.05
USP42-205ENST00000465073 MT1EP04732 61 aa8.5□□□□□ -1.05
USP42-205ENST00000465073 KRTAP4-9Q9BYQ8 210 aa8.49□□□□□ -1.05
USP42-205ENST00000465073 SNURFQ9Y675 71 aa8.42□□□□□ -1.06
USP42-205ENST00000465073 SPANXA2-OT1Q8N9U9 137 aa8.4□□□□□ -1.06
USP42-205ENST00000465073 CYSTM1Q9H1C7 97 aa8.34□□□□□ -1.07
USP42-205ENST00000465073 MT1GP13640 62 aa8.3□□□□□ -1.08
USP42-205ENST00000465073 A0A0D9SG42 100 aa8.29□□□□□ -1.08
USP42-205ENST00000465073 LCE1DQ5T752 114 aa8.26□□□□□ -1.09
USP42-205ENST00000465073 KRTAP19-5Q3LI72 72 aa8.25□□□□□ -1.09
USP42-205ENST00000465073 SVIPQ8NHG7 77 aa8.25□□□□□ -1.09
USP42-205ENST00000465073 PP632Q6XCG6 107 aa8.24□□□□□ -1.09
USP42-205ENST00000465073 SEC61GP60059 68 aa8.21□□□□□ -1.09
USP42-205ENST00000465073 SERP1Q9Y6X1 66 aa8.2□□□□□ -1.1
USP42-205ENST00000465073 K7ERU9 68 aa8.19□□□□□ -1.1
USP42-205ENST00000465073 LCE4AQ5TA78 99 aa8.19□□□□□ -1.1
USP42-205ENST00000465073 SPINT4Q6UDR6 99 aa8.18□□□□□ -1.1
USP42-205ENST00000465073 COA5Q86WW8 74 aa8.18□□□□□ -1.1
USP42-205ENST00000465073 SPATA8Q6RVD6 105 aa8.16□□□□□ -1.1
USP42-205ENST00000465073 SERP2Q8N6R1 65 aa8.14□□□□□ -1.11
USP42-205ENST00000465073 HMCN1Q96RW7 5635 aa8.14□□□□□ -1.11
USP42-205ENST00000465073 MT4P47944 62 aa8.12□□□□□ -1.11
USP42-205ENST00000465073 MT1MQ8N339 61 aa8.12□□□□□ -1.11
USP42-205ENST00000465073 LOC100996750A0A140TA64 210 aa8.1□□□□□ -1.11
USP42-205ENST00000465073 A0A1B0GU33 70 aa8.1□□□□□ -1.11
USP42-205ENST00000465073 KRTAP4-6Q9BYQ5 205 aa8.1□□□□□ -1.11
USP42-205ENST00000465073 KRTAP12-1P59990 96 aa8.09□□□□□ -1.11
USP42-205ENST00000465073 MT1LQ93083 61 aa8.06□□□□□ -1.12
USP42-205ENST00000465073 KRTAP5-4Q6L8H1 288 aa7.96□□□□□ -1.13
USP42-205ENST00000465073 AHNAK2Q8IVF2 5795 aa7.96□□□□□ -1.14
USP42-205ENST00000465073 KRTAP4-3Q9BYR4 195 aa7.92□□□□□ -1.14
USP42-205ENST00000465073 C10orf95Q9H7T3 257 aa7.9□□□□□ -1.14
USP42-205ENST00000465073 SMIM26A0A096LP01 95 aa7.88□□□□□ -1.15
USP42-205ENST00000465073 LCE3AQ5TA76 89 aa7.88□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 76 ms