RNA–Protein interactions for RNA: ENST00000464616.6

GARNL3-213, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 5

Gene GARNL3, Length 549 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-213ENST00000464616 DEFB1P60022 68 aa-1□□□□□ -2.57
GARNL3-213ENST00000464616 C6orf48Q9UBA6 75 aa-1□□□□□ -2.57
GARNL3-213ENST00000464616 MYO5CQ9NQX4 1742 aa-1.01□□□□□ -2.57
GARNL3-213ENST00000464616 DMDP11532 3685 aa-1.02□□□□□ -2.57
GARNL3-213ENST00000464616 MT1XP80297 61 aa-1.02□□□□□ -2.57
GARNL3-213ENST00000464616 C3P01024 1663 aa-1.03□□□□□ -2.57
GARNL3-213ENST00000464616 DNMBPQ6XZF7 1577 aa-1.03□□□□□ -2.57
GARNL3-213ENST00000464616 CLPSL2Q6UWE3 100 aa-1.03□□□□□ -2.57
GARNL3-213ENST00000464616 DCHS1Q96JQ0 3298 aa-1.04□□□□□ -2.58
GARNL3-213ENST00000464616 MROH1Q8NDA8 1641 aa-1.04□□□□□ -2.58
GARNL3-213ENST00000464616 MT1HL1P0DM35 61 aa-1.04□□□□□ -2.58
GARNL3-213ENST00000464616 SPTBN5Q9NRC6 3674 aaKnown RBP-1.04□□□□□ -2.58
GARNL3-213ENST00000464616 ABCC6O95255 1503 aa-1.05□□□□□ -2.58
GARNL3-213ENST00000464616 MT1GP13640 62 aa-1.05□□□□□ -2.58
GARNL3-213ENST00000464616 FCER1GP30273 86 aa-1.05□□□□□ -2.58
GARNL3-213ENST00000464616 KRTAP19-5Q3LI72 72 aa-1.05□□□□□ -2.58
GARNL3-213ENST00000464616 DIP2AQ14689 1571 aa-1.05□□□□□ -2.58
GARNL3-213ENST00000464616 SPEGQ15772 3267 aa-1.06□□□□□ -2.58
GARNL3-213ENST00000464616 K7EMI3 77 aa-1.06□□□□□ -2.58
GARNL3-213ENST00000464616 MT1BP07438 61 aa-1.06□□□□□ -2.58
GARNL3-213ENST00000464616 LY75O60449 1722 aa-1.06□□□□□ -2.58
GARNL3-213ENST00000464616 CDC42BPGQ6DT37 1551 aa-1.07□□□□□ -2.58
GARNL3-213ENST00000464616 GNG13Q9P2W3 67 aa-1.07□□□□□ -2.58
GARNL3-213ENST00000464616 DUOX2Q9NRD8 1548 aa-1.08□□□□□ -2.58
GARNL3-213ENST00000464616 CLASP1Q7Z460 1538 aa-1.09□□□□□ -2.58
GARNL3-213ENST00000464616 CSMD2Q7Z408 3487 aa-1.09□□□□□ -2.58
GARNL3-213ENST00000464616 MT1MQ8N339 61 aa-1.09□□□□□ -2.58
GARNL3-213ENST00000464616 MADDQ8WXG6 1647 aa-1.09□□□□□ -2.58
GARNL3-213ENST00000464616 CEP350Q5VT06 3117 aa-1.1□□□□□ -2.59
GARNL3-213ENST00000464616 SCRIBQ14160 1630 aa-1.1□□□□□ -2.59
GARNL3-213ENST00000464616 RANBP2P49792 3224 aaKnown RBP-1.1□□□□□ -2.59
GARNL3-213ENST00000464616 PDCD5O14737 125 aa-1.1□□□□□ -2.59
GARNL3-213ENST00000464616 CFAP54Q96N23 3096 aa-1.1□□□□□ -2.59
GARNL3-213ENST00000464616 FRYLO94915 3013 aa-1.1□□□□□ -2.59
GARNL3-213ENST00000464616 MGAQ8IWI9 3026 aa-1.11□□□□□ -2.59
GARNL3-213ENST00000464616 MT2AP02795 61 aa-1.11□□□□□ -2.59
GARNL3-213ENST00000464616 NCBP2-AS2Q69YL0 99 aa-1.11□□□□□ -2.59
GARNL3-213ENST00000464616 SMCO4Q9NRQ5 59 aa-1.11□□□□□ -2.59
GARNL3-213ENST00000464616 UGGT2Q9NYU1 1516 aa-1.11□□□□□ -2.59
GARNL3-213ENST00000464616 CEP250Q9BV73 2442 aa-1.12□□□□□ -2.59
GARNL3-213ENST00000464616 EP400Q96L91 3159 aa-1.13□□□□□ -2.59
GARNL3-213ENST00000464616 SERF2P84101 59 aa-1.13□□□□□ -2.59
GARNL3-213ENST00000464616 KRTAP8-1Q8IUC2 63 aa-1.13□□□□□ -2.59
GARNL3-213ENST00000464616 CDC42BPAQ5VT25 1732 aa-1.14□□□□□ -2.59
GARNL3-213ENST00000464616 HILPDAQ9Y5L2 63 aa-1.14□□□□□ -2.59
GARNL3-213ENST00000464616 ABCA9Q8IUA7 1624 aa-1.15□□□□□ -2.59
GARNL3-213ENST00000464616 A8MTW9 85 aa-1.15□□□□□ -2.59
GARNL3-213ENST00000464616 M0QZ58 72 aa-1.15□□□□□ -2.59
GARNL3-213ENST00000464616 SFTA3P0C7M3 94 aa-1.15□□□□□ -2.59
GARNL3-213ENST00000464616 IQGAP3Q86VI3 1631 aa-1.15□□□□□ -2.59
GARNL3-213ENST00000464616 SMR3BP02814 79 aaPredicted RBP-1.16□□□□□ -2.6
GARNL3-213ENST00000464616 MT1EP04732 61 aa-1.16□□□□□ -2.6
GARNL3-213ENST00000464616 MT1LQ93083 61 aa-1.16□□□□□ -2.6
GARNL3-213ENST00000464616 WDFY4Q6ZS81 3184 aa-1.16□□□□□ -2.6
GARNL3-213ENST00000464616 M0QY20 66 aa-1.17□□□□□ -2.6
GARNL3-213ENST00000464616 ASXL1Q8IXJ9 1541 aa-1.17□□□□□ -2.6
GARNL3-213ENST00000464616 ABRACLQ9P1F3 81 aa-1.18□□□□□ -2.6
GARNL3-213ENST00000464616 TIAM1Q13009 1591 aa-1.18□□□□□ -2.6
GARNL3-213ENST00000464616 LINC01549A6NIU2 74 aa-1.19□□□□□ -2.6
GARNL3-213ENST00000464616 MAST1Q9Y2H9 1570 aa-1.19□□□□□ -2.6
GARNL3-213ENST00000464616 VPS13CQ709C8 3753 aa-1.19□□□□□ -2.6
GARNL3-213ENST00000464616 WDFY3Q8IZQ1 3526 aa-1.19□□□□□ -2.6
GARNL3-213ENST00000464616 NMES1Q9C002 83 aa-1.2□□□□□ -2.6
GARNL3-213ENST00000464616 TMEM167BQ9NRX6 74 aa-1.2□□□□□ -2.6
GARNL3-213ENST00000464616 CFAP47Q6ZTR5 3102 aa-1.2□□□□□ -2.6
GARNL3-213ENST00000464616 LOC400499M0QZD8 3231 aa-1.21□□□□□ -2.6
GARNL3-213ENST00000464616 DNAH14Q0VDD8 3507 aa-1.21□□□□□ -2.6
GARNL3-213ENST00000464616 MKI67P46013 3256 aaKnown RBP-1.21□□□□□ -2.6
GARNL3-213ENST00000464616 CROCC2H7BZ55 1655 aa-1.22□□□□□ -2.6
GARNL3-213ENST00000464616 GLI2P10070 1586 aa-1.23□□□□□ -2.61
GARNL3-213ENST00000464616 A0A1B0GUL6 1792 aa-1.24□□□□□ -2.61
GARNL3-213ENST00000464616 MT1FP04733 61 aa-1.24□□□□□ -2.61
GARNL3-213ENST00000464616 ABCA6Q8N139 1617 aa-1.26□□□□□ -2.61
GARNL3-213ENST00000464616 MUC3AQ02505 3323 aa-1.26□□□□□ -2.61
GARNL3-213ENST00000464616 SZT2Q5T011 3432 aa-1.27□□□□□ -2.61
GARNL3-213ENST00000464616 USP34Q70CQ2 3546 aa-1.27□□□□□ -2.61
GARNL3-213ENST00000464616 ALS2Q96Q42 1657 aa-1.28□□□□□ -2.61
GARNL3-213ENST00000464616 SMIM27A0A1W2PRY6 76 aa-1.28□□□□□ -2.61
GARNL3-213ENST00000464616 M0R1W7 72 aa-1.28□□□□□ -2.61
GARNL3-213ENST00000464616 EFCAB5A4FU69 1503 aa-1.29□□□□□ -2.62
GARNL3-213ENST00000464616 VCANP13611 3396 aa-1.29□□□□□ -2.62
GARNL3-213ENST00000464616 LINC01546A6NGU7 62 aa-1.3□□□□□ -2.62
GARNL3-213ENST00000464616 LINC00308Q8TCZ7 52 aa-1.3□□□□□ -2.62
GARNL3-213ENST00000464616 PCNTO95613 3336 aa-1.31□□□□□ -2.62
GARNL3-213ENST00000464616 FAM208AQ9UK61 1670 aaKnown RBP-1.31□□□□□ -2.62
GARNL3-213ENST00000464616 PREX2Q70Z35 1606 aa-1.31□□□□□ -2.62
GARNL3-213ENST00000464616 DEFB4AO15263 64 aa-1.32□□□□□ -2.62
GARNL3-213ENST00000464616 KAAG1Q9UBP8 84 aa-1.32□□□□□ -2.62
GARNL3-213ENST00000464616 SPART-AS1P0CW21 52 aa-1.33□□□□□ -2.62
GARNL3-213ENST00000464616 S100ZQ8WXG8 99 aa-1.33□□□□□ -2.62
GARNL3-213ENST00000464616 DNAH12Q6ZR08 3092 aa-1.34□□□□□ -2.62
GARNL3-213ENST00000464616 A0A087WWC5 75 aa-1.34□□□□□ -2.62
GARNL3-213ENST00000464616 H0YGX0 51 aa-1.34□□□□□ -2.62
GARNL3-213ENST00000464616 EEA1Q15075 1411 aa-1.34□□□□□ -2.62
GARNL3-213ENST00000464616 IGIPA6NJ69 53 aa-1.35□□□□□ -2.63
GARNL3-213ENST00000464616 CCDC180Q9P1Z9 1646 aa-1.37□□□□□ -2.63
GARNL3-213ENST00000464616 UNC80Q8N2C7 3258 aa-1.4□□□□□ -2.63
GARNL3-213ENST00000464616 CENPFP49454 3210 aa-1.4□□□□□ -2.63
GARNL3-213ENST00000464616 KIF21BO75037 1637 aa-1.4□□□□□ -2.63
GARNL3-213ENST00000464616 WFDC10BQ8IUB3 73 aa-1.41□□□□□ -2.64
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms