RNA–Protein interactions for RNA: ENST00000464480.1

HMGXB4-205, Transcript of HMG-box containing 4, humanhuman

TSL 2

Gene HMGXB4, Length 559 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-205ENST00000464480 SPEGQ15772 3267 aa0.9□□□□□ -2.26
HMGXB4-205ENST00000464480 ACANP16112 2415 aa0.9□□□□□ -2.27
HMGXB4-205ENST00000464480 STAB1Q9NY15 2570 aa0.9□□□□□ -2.27
HMGXB4-205ENST00000464480 CENPEQ02224 2701 aa0.89□□□□□ -2.27
HMGXB4-205ENST00000464480 MEGF8Q7Z7M0 2845 aa0.89□□□□□ -2.27
HMGXB4-205ENST00000464480 M0R2T5 61 aa0.89□□□□□ -2.27
HMGXB4-205ENST00000464480 FRYLO94915 3013 aa0.89□□□□□ -2.27
HMGXB4-205ENST00000464480 FBN2P35556 2912 aa0.88□□□□□ -2.27
HMGXB4-205ENST00000464480 AKAP13Q12802 2813 aa0.88□□□□□ -2.27
HMGXB4-205ENST00000464480 ZFHX4Q86UP3 3567 aa0.88□□□□□ -2.27
HMGXB4-205ENST00000464480 ATRQ13535 2644 aa0.88□□□□□ -2.27
HMGXB4-205ENST00000464480 TEP1Q99973 2627 aaKnown RBP0.88□□□□□ -2.27
HMGXB4-205ENST00000464480 ATMQ13315 3056 aa0.88□□□□□ -2.27
HMGXB4-205ENST00000464480 TEX15Q9BXT5 2789 aa0.88□□□□□ -2.27
HMGXB4-205ENST00000464480 HIVEP1P15822 2718 aa0.88□□□□□ -2.27
HMGXB4-205ENST00000464480 DNAH14Q0VDD8 3507 aa0.88□□□□□ -2.27
HMGXB4-205ENST00000464480 MYO15AQ9UKN7 3530 aa0.88□□□□□ -2.27
HMGXB4-205ENST00000464480 LOC400499M0QZD8 3231 aa0.87□□□□□ -2.27
HMGXB4-205ENST00000464480 LRBAP50851 2863 aa0.87□□□□□ -2.27
HMGXB4-205ENST00000464480 CELSR1Q9NYQ6 3014 aa0.87□□□□□ -2.27
HMGXB4-205ENST00000464480 TLN2Q9Y4G6 2542 aa0.87□□□□□ -2.27
HMGXB4-205ENST00000464480 TENM4Q6N022 2769 aa0.87□□□□□ -2.27
HMGXB4-205ENST00000464480 ITPR3Q14573 2671 aa0.87□□□□□ -2.27
HMGXB4-205ENST00000464480 FLNAP21333 2647 aaKnown RBP0.86□□□□□ -2.27
HMGXB4-205ENST00000464480 LAMA1P25391 3075 aa0.86□□□□□ -2.27
HMGXB4-205ENST00000464480 BOD1L1Q8NFC6 3051 aa0.86□□□□□ -2.27
HMGXB4-205ENST00000464480 NF1P21359 2839 aa0.86□□□□□ -2.27
HMGXB4-205ENST00000464480 APCP25054 2843 aa0.86□□□□□ -2.27
HMGXB4-205ENST00000464480 SYNE2Q8WXH0 6885 aaKnown RBP0.86□□□□□ -2.27
HMGXB4-205ENST00000464480 FLNCQ14315 2725 aa0.86□□□□□ -2.27
HMGXB4-205ENST00000464480 ITPR2Q14571 2701 aa0.86□□□□□ -2.27
HMGXB4-205ENST00000464480 TGP01266 2768 aa0.85□□□□□ -2.27
HMGXB4-205ENST00000464480 NEBP20929 6669 aa0.85□□□□□ -2.27
HMGXB4-205ENST00000464480 DSTQ03001 7570 aaKnown RBP0.85□□□□□ -2.27
HMGXB4-205ENST00000464480 MGAM2Q2M2H8 2515 aa0.85□□□□□ -2.27
HMGXB4-205ENST00000464480 NSD1Q96L73 2696 aaPredicted RBP0.85□□□□□ -2.27
HMGXB4-205ENST00000464480 ASPMQ8IZT6 3477 aa0.85□□□□□ -2.27
HMGXB4-205ENST00000464480 NIPBLQ6KC79 2804 aaeCLIP0.85□□□□□ -2.27
HMGXB4-205ENST00000464480 AKAP9Q99996 3911 aa0.85□□□□□ -2.27
HMGXB4-205ENST00000464480 ADGRG4Q8IZF6 3080 aa0.85□□□□□ -2.27
HMGXB4-205ENST00000464480 CELSR3Q9NYQ7 3312 aa0.84□□□□□ -2.27
HMGXB4-205ENST00000464480 NBEAL1Q6ZS30 2694 aa0.83□□□□□ -2.28
HMGXB4-205ENST00000464480 SMG1Q96Q15 3661 aaKnown RBP0.83□□□□□ -2.28
HMGXB4-205ENST00000464480 FSIP2Q5CZC0 6907 aa0.83□□□□□ -2.28
HMGXB4-205ENST00000464480 UTP20O75691 2785 aaKnown RBP0.83□□□□□ -2.28
HMGXB4-205ENST00000464480 COL7A1Q02388 2944 aa0.82□□□□□ -2.28
HMGXB4-205ENST00000464480 PDZD2O15018 2839 aa0.82□□□□□ -2.28
HMGXB4-205ENST00000464480 KRTAP8-1Q8IUC2 63 aa0.82□□□□□ -2.28
HMGXB4-205ENST00000464480 NOTCH1P46531 2555 aa0.81□□□□□ -2.28
HMGXB4-205ENST00000464480 KRTAP2-3P0C7H8 128 aa0.81□□□□□ -2.28
HMGXB4-205ENST00000464480 KRTAP2-4Q9BYR9 128 aa0.81□□□□□ -2.28
HMGXB4-205ENST00000464480 KRTAP2-1Q9BYU5 128 aa0.81□□□□□ -2.28
HMGXB4-205ENST00000464480 VPS13DQ5THJ4 4388 aa0.81□□□□□ -2.28
HMGXB4-205ENST00000464480 RELNP78509 3460 aa0.81□□□□□ -2.28
HMGXB4-205ENST00000464480 STAB2Q8WWQ8 2551 aa0.81□□□□□ -2.28
HMGXB4-205ENST00000464480 DCHS2Q6V1P9 2916 aa0.81□□□□□ -2.28
HMGXB4-205ENST00000464480 DMDP11532 3685 aa0.8□□□□□ -2.28
HMGXB4-205ENST00000464480 NBPF19A0A087WUL8 3843 aa0.8□□□□□ -2.28
HMGXB4-205ENST00000464480 TACC2O95359 2948 aa0.8□□□□□ -2.28
HMGXB4-205ENST00000464480 MXRA5Q9NR99 2828 aa0.8□□□□□ -2.28
HMGXB4-205ENST00000464480 MUC5ACP98088 5654 aa0.8□□□□□ -2.28
HMGXB4-205ENST00000464480 LAMA5O15230 3695 aa0.79□□□□□ -2.28
HMGXB4-205ENST00000464480 CSMD2Q7Z408 3487 aa0.78□□□□□ -2.28
HMGXB4-205ENST00000464480 BSNQ9UPA5 3926 aa0.78□□□□□ -2.29
HMGXB4-205ENST00000464480 DNAH11Q96DT5 4516 aa0.77□□□□□ -2.29
HMGXB4-205ENST00000464480 MDN1Q9NU22 5596 aa0.77□□□□□ -2.29
HMGXB4-205ENST00000464480 NBEAL2Q6ZNJ1 2754 aa0.77□□□□□ -2.29
HMGXB4-205ENST00000464480 WDFY3Q8IZQ1 3526 aa0.76□□□□□ -2.29
HMGXB4-205ENST00000464480 TENM3Q9P273 2699 aa0.76□□□□□ -2.29
HMGXB4-205ENST00000464480 ZANQ9Y493 2812 aa0.75□□□□□ -2.29
HMGXB4-205ENST00000464480 CSMD1Q96PZ7 3565 aa0.75□□□□□ -2.29
HMGXB4-205ENST00000464480 PKD1L1Q8TDX9 2849 aa0.75□□□□□ -2.29
HMGXB4-205ENST00000464480 DNAH3Q8TD57 4116 aa0.75□□□□□ -2.29
HMGXB4-205ENST00000464480 LYSTQ99698 3801 aa0.74□□□□□ -2.29
HMGXB4-205ENST00000464480 SPENQ96T58 3664 aaKnown RBP0.74□□□□□ -2.29
HMGXB4-205ENST00000464480 HRNRQ86YZ3 2850 aaPredicted RBP0.74□□□□□ -2.29
HMGXB4-205ENST00000464480 DNHD1Q96M86 4753 aa0.74□□□□□ -2.29
HMGXB4-205ENST00000464480 VPS13BQ7Z7G8 4022 aa0.74□□□□□ -2.29
HMGXB4-205ENST00000464480 ANK2Q01484 3957 aa0.73□□□□□ -2.29
HMGXB4-205ENST00000464480 CSMD3Q7Z407 3707 aa0.73□□□□□ -2.29
HMGXB4-205ENST00000464480 KMT2DO14686 5537 aa0.72□□□□□ -2.29
HMGXB4-205ENST00000464480 CMYA5Q8N3K9 4069 aa0.72□□□□□ -2.29
HMGXB4-205ENST00000464480 SMR3BP02814 79 aaPredicted RBP0.72□□□□□ -2.29
HMGXB4-205ENST00000464480 KMT2AQ03164 3969 aa0.72□□□□□ -2.29
HMGXB4-205ENST00000464480 ZNF469Q96JG9 3925 aaPredicted RBP0.72□□□□□ -2.29
HMGXB4-205ENST00000464480 SACSQ9NZJ4 4579 aa0.72□□□□□ -2.29
HMGXB4-205ENST00000464480 DNAH7Q8WXX0 4024 aa0.72□□□□□ -2.29
HMGXB4-205ENST00000464480 ANK3Q12955 4377 aaKnown RBP0.71□□□□□ -2.3
HMGXB4-205ENST00000464480 TRRAPQ9Y4A5 3859 aa0.71□□□□□ -2.3
HMGXB4-205ENST00000464480 FLGP20930 4061 aaPredicted RBP0.71□□□□□ -2.3
HMGXB4-205ENST00000464480 FRAS1Q86XX4 4008 aa0.71□□□□□ -2.3
HMGXB4-205ENST00000464480 PRM1P04553 51 aa0.7□□□□□ -2.3
HMGXB4-205ENST00000464480 KRTAP5-10Q6L8G5 202 aa0.69□□□□□ -2.3
HMGXB4-205ENST00000464480 DYNC2H1Q8NCM8 4307 aaKnown RBP0.69□□□□□ -2.3
HMGXB4-205ENST00000464480 PRKDCP78527 4128 aaKnown RBP0.69□□□□□ -2.3
HMGXB4-205ENST00000464480 MYCBP2O75592 4640 aa0.69□□□□□ -2.3
HMGXB4-205ENST00000464480 DNAH8Q96JB1 4490 aa0.69□□□□□ -2.3
HMGXB4-205ENST00000464480 HECTD4Q9Y4D8 3996 aa0.69□□□□□ -2.3
HMGXB4-205ENST00000464480 SVEP1Q4LDE5 3571 aa0.68□□□□□ -2.3
HMGXB4-205ENST00000464480 MUC16Q8WXI7 14507 aa0.68□□□□□ -2.3
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms