RNA–Protein interactions for RNA: ENST00000464001.1

ITGB1-208, Transcript of integrin subunit beta 1, humanhuman

TSL 2

Gene ITGB1, Length 316 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-208ENST00000464001 EPG5Q9HCE0 2579 aa0.25□□□□□ -2.37
ITGB1-208ENST00000464001 PKHD1P08F94 4074 aa0.24□□□□□ -2.37
ITGB1-208ENST00000464001 DYNC2H1Q8NCM8 4307 aaKnown RBP0.24□□□□□ -2.37
ITGB1-208ENST00000464001 KALRNO60229 2985 aa0.24□□□□□ -2.37
ITGB1-208ENST00000464001 DNAH9Q9NYC9 4486 aa0.24□□□□□ -2.37
ITGB1-208ENST00000464001 LAMA5O15230 3695 aa0.24□□□□□ -2.37
ITGB1-208ENST00000464001 FRYQ5TBA9 3013 aa0.23□□□□□ -2.37
ITGB1-208ENST00000464001 MAP1AP78559 2803 aaPredicted RBP0.23□□□□□ -2.37
ITGB1-208ENST00000464001 USP9YO00507 2555 aaPredicted RBP0.22□□□□□ -2.37
ITGB1-208ENST00000464001 UTP20O75691 2785 aaKnown RBP0.22□□□□□ -2.37
ITGB1-208ENST00000464001 KRTAP19-5Q3LI72 72 aa0.22□□□□□ -2.37
ITGB1-208ENST00000464001 DEFB104AQ8WTQ1 72 aa0.22□□□□□ -2.37
ITGB1-208ENST00000464001 DNAH6Q9C0G6 4158 aa0.22□□□□□ -2.37
ITGB1-208ENST00000464001 NBEAQ8NFP9 2946 aa0.22□□□□□ -2.37
ITGB1-208ENST00000464001 HIVEP1P15822 2718 aa0.22□□□□□ -2.37
ITGB1-208ENST00000464001 APOBP04114 4563 aaKnown RBP0.21□□□□□ -2.38
ITGB1-208ENST00000464001 FAT3Q8TDW7 4589 aa0.2□□□□□ -2.38
ITGB1-208ENST00000464001 SMR3BP02814 79 aaPredicted RBP0.2□□□□□ -2.38
ITGB1-208ENST00000464001 DNAH7Q8WXX0 4024 aa0.2□□□□□ -2.38
ITGB1-208ENST00000464001 NBPF19A0A087WUL8 3843 aa0.19□□□□□ -2.38
ITGB1-208ENST00000464001 AKAP9Q99996 3911 aa0.19□□□□□ -2.38
ITGB1-208ENST00000464001 LRP2P98164 4655 aa0.19□□□□□ -2.38
ITGB1-208ENST00000464001 LAMA1P25391 3075 aa0.18□□□□□ -2.38
ITGB1-208ENST00000464001 ZFHX4Q86UP3 3567 aa0.18□□□□□ -2.38
ITGB1-208ENST00000464001 CRYBG3Q68DQ2 2970 aa0.18□□□□□ -2.38
ITGB1-208ENST00000464001 TTTY10Q9BZA0 68 aa0.18□□□□□ -2.38
ITGB1-208ENST00000464001 HTTP42858 3142 aa0.18□□□□□ -2.38
ITGB1-208ENST00000464001 ITPR3Q14573 2671 aa0.17□□□□□ -2.38
ITGB1-208ENST00000464001 SPTBN5Q9NRC6 3674 aaKnown RBP0.17□□□□□ -2.38
ITGB1-208ENST00000464001 USP9XQ93008 2570 aaPredicted RBP0.16□□□□□ -2.38
ITGB1-208ENST00000464001 TRIOO75962 3097 aa0.16□□□□□ -2.38
ITGB1-208ENST00000464001 LINC01590Q5TEZ4 76 aa0.15□□□□□ -2.39
ITGB1-208ENST00000464001 SPRR2GQ9BYE4 73 aa0.15□□□□□ -2.39
ITGB1-208ENST00000464001 MGAM2Q2M2H8 2515 aa0.15□□□□□ -2.39
ITGB1-208ENST00000464001 FAT1Q14517 4588 aa0.14□□□□□ -2.39
ITGB1-208ENST00000464001 STAB2Q8WWQ8 2551 aa0.14□□□□□ -2.39
ITGB1-208ENST00000464001 DNAH8Q96JB1 4490 aa0.14□□□□□ -2.39
ITGB1-208ENST00000464001 MXRA5Q9NR99 2828 aa0.14□□□□□ -2.39
ITGB1-208ENST00000464001 DNAH1Q9P2D7 4330 aa0.14□□□□□ -2.39
ITGB1-208ENST00000464001 KMT2DO14686 5537 aa0.13□□□□□ -2.39
ITGB1-208ENST00000464001 NBEAL1Q6ZS30 2694 aa0.13□□□□□ -2.39
ITGB1-208ENST00000464001 DEFB1P60022 68 aa0.11□□□□□ -2.39
ITGB1-208ENST00000464001 H3BSH0 61 aa0.1□□□□□ -2.39
ITGB1-208ENST00000464001 PRCDQ00LT1 54 aa0.1□□□□□ -2.39
ITGB1-208ENST00000464001 WDR87Q6ZQQ6 2873 aa0.09□□□□□ -2.39
ITGB1-208ENST00000464001 GPR98Q8WXG9 6306 aa0.09□□□□□ -2.4
ITGB1-208ENST00000464001 HERC1Q15751 4861 aa0.09□□□□□ -2.4
ITGB1-208ENST00000464001 RELNP78509 3460 aa0.07□□□□□ -2.4
ITGB1-208ENST00000464001 DNAH10Q8IVF4 4471 aa0.07□□□□□ -2.4
ITGB1-208ENST00000464001 SPTAN1Q13813 2472 aaKnown RBP0.07□□□□□ -2.4
ITGB1-208ENST00000464001 MGAQ8IWI9 3026 aa0.06□□□□□ -2.4
ITGB1-208ENST00000464001 ITPR1Q14643 2758 aa0.06□□□□□ -2.4
ITGB1-208ENST00000464001 CSMD1Q96PZ7 3565 aa0.05□□□□□ -2.4
ITGB1-208ENST00000464001 ADGRG4Q8IZF6 3080 aa0.05□□□□□ -2.4
ITGB1-208ENST00000464001 LAMA3Q16787 3333 aa0.05□□□□□ -2.4
ITGB1-208ENST00000464001 KRTAP19-7Q3SYF9 63 aa0.03□□□□□ -2.4
ITGB1-208ENST00000464001 DOPEY1Q5JWR5 2465 aa0.03□□□□□ -2.41
ITGB1-208ENST00000464001 SSPOA2VEC9 5147 aa0.02□□□□□ -2.41
ITGB1-208ENST00000464001 K7EIM0 57 aa0.02□□□□□ -2.41
ITGB1-208ENST00000464001 PLECQ15149 4684 aaKnown RBP0.02□□□□□ -2.41
ITGB1-208ENST00000464001 C5orf42Q9H799 3197 aa0.01□□□□□ -2.41
ITGB1-208ENST00000464001 SYNE2Q8WXH0 6885 aaKnown RBP0.01□□□□□ -2.41
ITGB1-208ENST00000464001 PCLOQ9Y6V0 5065 aa0.01□□□□□ -2.41
ITGB1-208ENST00000464001 CMYA5Q8N3K9 4069 aa0.01□□□□□ -2.41
ITGB1-208ENST00000464001 DMXL2Q8TDJ6 3036 aa0□□□□□ -2.41
ITGB1-208ENST00000464001 MT1HP80294 61 aa0□□□□□ -2.41
ITGB1-208ENST00000464001 A0A096LNI7 61 aa-0.02□□□□□ -2.41
ITGB1-208ENST00000464001 RHPN1-AS1Q9BWJ2 59 aa-0.02□□□□□ -2.41
ITGB1-208ENST00000464001 FSIP2Q5CZC0 6907 aa-0.02□□□□□ -2.41
ITGB1-208ENST00000464001 CFAP54Q96N23 3096 aa-0.02□□□□□ -2.41
ITGB1-208ENST00000464001 KRTAP19-8Q3LI54 63 aa-0.03□□□□□ -2.41
ITGB1-208ENST00000464001 TEX15Q9BXT5 2789 aa-0.04□□□□□ -2.42
ITGB1-208ENST00000464001 CEP250Q9BV73 2442 aa-0.04□□□□□ -2.42
ITGB1-208ENST00000464001 MUC2Q02817 5179 aa-0.04□□□□□ -2.42
ITGB1-208ENST00000464001 SRCAPQ6ZRS2 3230 aa-0.04□□□□□ -2.42
ITGB1-208ENST00000464001 DEFB136Q30KP8 78 aa-0.05□□□□□ -2.42
ITGB1-208ENST00000464001 KRTAP6-1Q3LI64 71 aa-0.05□□□□□ -2.42
ITGB1-208ENST00000464001 MT1EP04732 61 aa-0.06□□□□□ -2.42
ITGB1-208ENST00000464001 STARD9Q9P2P6 4700 aa-0.07□□□□□ -2.42
ITGB1-208ENST00000464001 TMEM167AQ8TBQ9 72 aa-0.07□□□□□ -2.42
ITGB1-208ENST00000464001 KMT2CQ8NEZ4 4911 aaKnown RBP-0.07□□□□□ -2.42
ITGB1-208ENST00000464001 DYNC1H1Q14204 4646 aaKnown RBP-0.08□□□□□ -2.42
ITGB1-208ENST00000464001 LRBAP50851 2863 aa-0.09□□□□□ -2.42
ITGB1-208ENST00000464001 MUC17Q685J3 4493 aa-0.09□□□□□ -2.42
ITGB1-208ENST00000464001 DNAH17Q9UFH2 4485 aa-0.09□□□□□ -2.42
ITGB1-208ENST00000464001 TRRAPQ9Y4A5 3859 aa-0.1□□□□□ -2.42
ITGB1-208ENST00000464001 TLN1Q9Y490 2541 aaKnown RBP-0.1□□□□□ -2.43
ITGB1-208ENST00000464001 MT1LQ93083 61 aa-0.11□□□□□ -2.43
ITGB1-208ENST00000464001 ATMQ13315 3056 aa-0.11□□□□□ -2.43
ITGB1-208ENST00000464001 CFAP46Q8IYW2 2715 aa-0.12□□□□□ -2.43
ITGB1-208ENST00000464001 MT1XP80297 61 aa-0.13□□□□□ -2.43
ITGB1-208ENST00000464001 RPL39P5Q59GN2 51 aa-0.13□□□□□ -2.43
ITGB1-208ENST00000464001 DNAH5Q8TE73 4624 aa-0.14□□□□□ -2.43
ITGB1-208ENST00000464001 UBR4Q5T4S7 5183 aa-0.14□□□□□ -2.43
ITGB1-208ENST00000464001 MYO9AB2RTY4 2548 aa-0.14□□□□□ -2.43
ITGB1-208ENST00000464001 MACF1Q9UPN3 7388 aaKnown RBP-0.14□□□□□ -2.43
ITGB1-208ENST00000464001 H3BUX3 64 aa-0.15□□□□□ -2.43
ITGB1-208ENST00000464001 DEFB4AO15263 64 aa-0.15□□□□□ -2.43
ITGB1-208ENST00000464001 HTN1P15515 57 aa-0.15□□□□□ -2.43
ITGB1-208ENST00000464001 USH2AO75445 5202 aa-0.16□□□□□ -2.43
Retrieved 100 of 20,778 RNA–protein pairs in 149.4 ms