RNA–Protein interactions for RNA: ENST00000463369.5

SHQ1-203, Transcript of SHQ1, H/ACA ribonucleoprotein assembly factor, humanhuman

TSL 2 BASIC

Gene SHQ1, Length 2,065 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHQ1-203ENST00000463369 HSPG2P98160 4391 aa4.89□□□□□ -1.63
SHQ1-203ENST00000463369 SMR3BP02814 79 aaPredicted RBP4.88□□□□□ -1.63
SHQ1-203ENST00000463369 KRTAP4-8Q9BYQ9 185 aa4.88□□□□□ -1.63
SHQ1-203ENST00000463369 PKHD1L1Q86WI1 4243 aa4.86□□□□□ -1.63
SHQ1-203ENST00000463369 RYR1P21817 5038 aa4.85□□□□□ -1.63
SHQ1-203ENST00000463369 IGKV2D-30A0A075B6S6 120 aa4.85□□□□□ -1.63
SHQ1-203ENST00000463369 FAT1Q14517 4588 aa4.84□□□□□ -1.63
SHQ1-203ENST00000463369 KRTAP10-4P60372 401 aaPredicted RBP4.84□□□□□ -1.63
SHQ1-203ENST00000463369 LINC00304Q8N9R0 145 aa4.84□□□□□ -1.63
SHQ1-203ENST00000463369 NDUFAF8A1L188 74 aa4.82□□□□□ -1.64
SHQ1-203ENST00000463369 KIAA1109Q2LD37 5005 aa4.82□□□□□ -1.64
SHQ1-203ENST00000463369 H0YAA0 97 aa4.82□□□□□ -1.64
SHQ1-203ENST00000463369 SSBP3-AS1Q7Z2R9 100 aa4.82□□□□□ -1.64
SHQ1-203ENST00000463369 Q5VSD8 79 aa4.81□□□□□ -1.64
SHQ1-203ENST00000463369 SPINK1P00995 79 aa4.8□□□□□ -1.64
SHQ1-203ENST00000463369 KRTAP17-1Q9BYP8 105 aa4.8□□□□□ -1.64
SHQ1-203ENST00000463369 A0A1B0GU33 70 aa4.79□□□□□ -1.64
SHQ1-203ENST00000463369 KRTAP9-2Q9BYQ4 174 aa4.79□□□□□ -1.64
SHQ1-203ENST00000463369 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.77□□□□□ -1.65
SHQ1-203ENST00000463369 KRTAP1-4P0C5Y4 121 aa4.76□□□□□ -1.65
SHQ1-203ENST00000463369 BIRC6Q9NR09 4857 aa4.76□□□□□ -1.65
SHQ1-203ENST00000463369 KRTAP9-6A0A140TA67 174 aa4.76□□□□□ -1.65
SHQ1-203ENST00000463369 KRTAP4-12Q9BQ66 201 aa4.74□□□□□ -1.65
SHQ1-203ENST00000463369 H1FX-AS1Q4G0G2 97 aa4.71□□□□□ -1.65
SHQ1-203ENST00000463369 KRTAP19-1Q8IUB9 90 aa4.71□□□□□ -1.65
SHQ1-203ENST00000463369 KRTAP13-2Q52LG2 175 aa4.71□□□□□ -1.66
SHQ1-203ENST00000463369 FLG2Q5D862 2391 aaPredicted RBP4.7□□□□□ -1.66
SHQ1-203ENST00000463369 KRTAP4-5Q9BYR2 181 aa4.7□□□□□ -1.66
SHQ1-203ENST00000463369 CRIPTQ9P021 101 aa4.7□□□□□ -1.66
SHQ1-203ENST00000463369 FAT3Q8TDW7 4589 aa4.69□□□□□ -1.66
SHQ1-203ENST00000463369 KRTAP15-1Q3LI76 137 aa4.69□□□□□ -1.66
SHQ1-203ENST00000463369 TNXBP22105 4242 aa4.68□□□□□ -1.66
SHQ1-203ENST00000463369 HERC2O95714 4834 aa4.67□□□□□ -1.66
SHQ1-203ENST00000463369 LRP1Q07954 4544 aaKnown RBP4.67□□□□□ -1.66
SHQ1-203ENST00000463369 LCE3BQ5TA77 95 aa4.66□□□□□ -1.66
SHQ1-203ENST00000463369 KRTAP10-8P60410 259 aa4.65□□□□□ -1.66
SHQ1-203ENST00000463369 MYCBP2O75592 4640 aa4.62□□□□□ -1.67
SHQ1-203ENST00000463369 ABCA13Q86UQ4 5058 aa4.61□□□□□ -1.67
SHQ1-203ENST00000463369 MT1HL1P0DM35 61 aa4.61□□□□□ -1.67
SHQ1-203ENST00000463369 SPINT4Q6UDR6 99 aa4.6□□□□□ -1.67
SHQ1-203ENST00000463369 COX6B2Q6YFQ2 88 aa4.6□□□□□ -1.67
SHQ1-203ENST00000463369 R4GN34 69 aa4.6□□□□□ -1.67
SHQ1-203ENST00000463369 RPS29P62273 56 aaKnown RBP4.59□□□□□ -1.67
SHQ1-203ENST00000463369 TPRXLQ17RH7 258 aa4.58□□□□□ -1.68
SHQ1-203ENST00000463369 DMBT1Q9UGM3 2413 aaPredicted RBP4.57□□□□□ -1.68
SHQ1-203ENST00000463369 RPL37P61927 97 aaKnown RBP4.55□□□□□ -1.68
SHQ1-203ENST00000463369 KRTAP9-9Q9BYP9 154 aa4.55□□□□□ -1.68
SHQ1-203ENST00000463369 KRTAP9-4Q9BYQ2 154 aa4.55□□□□□ -1.68
SHQ1-203ENST00000463369 PCLOQ9Y6V0 5065 aa4.53□□□□□ -1.68
SHQ1-203ENST00000463369 KRTAP19-4Q3LI73 84 aa4.52□□□□□ -1.69
SHQ1-203ENST00000463369 PRO2289Q9P1D8 64 aa4.52□□□□□ -1.69
SHQ1-203ENST00000463369 C10orf95Q9H7T3 257 aa4.49□□□□□ -1.69
SHQ1-203ENST00000463369 KRTAP10-6P60371 365 aaPredicted RBP4.47□□□□□ -1.69
SHQ1-203ENST00000463369 KRTAP4-8A0A0G2JLE6 195 aa4.47□□□□□ -1.69
SHQ1-203ENST00000463369 KRTAP13-4Q3LI77 160 aa4.46□□□□□ -1.7
SHQ1-203ENST00000463369 A0A0D9SG42 100 aa4.45□□□□□ -1.7
SHQ1-203ENST00000463369 C9orf92A6NGG3 77 aa4.44□□□□□ -1.7
SHQ1-203ENST00000463369 LCE4AQ5TA78 99 aa4.41□□□□□ -1.7
SHQ1-203ENST00000463369 S4R3F8 94 aa4.39□□□□□ -1.71
SHQ1-203ENST00000463369 KRTAP4-7Q9BYR0 210 aa4.38□□□□□ -1.71
SHQ1-203ENST00000463369 KRTAP9-8Q9BYQ0 159 aa4.37□□□□□ -1.71
SHQ1-203ENST00000463369 LCE1DQ5T752 114 aa4.36□□□□□ -1.71
SHQ1-203ENST00000463369 HERC1Q15751 4861 aa4.36□□□□□ -1.71
SHQ1-203ENST00000463369 KRTAP5-3Q6L8H2 238 aa4.36□□□□□ -1.71
SHQ1-203ENST00000463369 LPAP08519 4548 aa4.36□□□□□ -1.71
SHQ1-203ENST00000463369 KRTAP12-2P59991 146 aa4.35□□□□□ -1.71
SHQ1-203ENST00000463369 KRTAP9-7A8MTY7 169 aa4.34□□□□□ -1.71
SHQ1-203ENST00000463369 KRTAP12-1P59990 96 aa4.3□□□□□ -1.72
SHQ1-203ENST00000463369 LRP2P98164 4655 aa4.29□□□□□ -1.72
SHQ1-203ENST00000463369 HMCN2Q8NDA2 5059 aa4.29□□□□□ -1.72
SHQ1-203ENST00000463369 MUC17Q685J3 4493 aa4.23□□□□□ -1.73
SHQ1-203ENST00000463369 LCE5AQ5TCM9 118 aa4.23□□□□□ -1.73
SHQ1-203ENST00000463369 KRTAP4-9Q9BYQ8 210 aa4.22□□□□□ -1.73
SHQ1-203ENST00000463369 M0QZ58 72 aa4.19□□□□□ -1.74
SHQ1-203ENST00000463369 PLAC4Q8WY50 150 aa4.18□□□□□ -1.74
SHQ1-203ENST00000463369 KRTAP4-2Q9BYR5 136 aa4.18□□□□□ -1.74
SHQ1-203ENST00000463369 KRTAP9-3Q9BYQ3 159 aa4.17□□□□□ -1.74
SHQ1-203ENST00000463369 KRTAP4-1Q9BYQ7 146 aa4.14□□□□□ -1.75
SHQ1-203ENST00000463369 UBR4Q5T4S7 5183 aa4.11□□□□□ -1.75
SHQ1-203ENST00000463369 KRTAP4-11Q9BYQ6 195 aa4.09□□□□□ -1.75
SHQ1-203ENST00000463369 RNF213Q63HN8 5207 aa4.09□□□□□ -1.75
SHQ1-203ENST00000463369 MUC2Q02817 5179 aa4.08□□□□□ -1.76
SHQ1-203ENST00000463369 INE1O15225 51 aa4.04□□□□□ -1.76
SHQ1-203ENST00000463369 KRTAP19-2Q3LHN2 52 aa4.02□□□□□ -1.77
SHQ1-203ENST00000463369 PP632Q6XCG6 107 aa3.99□□□□□ -1.77
SHQ1-203ENST00000463369 FLGP20930 4061 aaPredicted RBP3.99□□□□□ -1.77
SHQ1-203ENST00000463369 FAT4Q6V0I7 4981 aa3.92□□□□□ -1.78
SHQ1-203ENST00000463369 MT1HP80294 61 aa3.88□□□□□ -1.79
SHQ1-203ENST00000463369 SPRR5A0A1B0GTR4 108 aa3.86□□□□□ -1.79
SHQ1-203ENST00000463369 KRTAP2-2Q9BYT5 123 aa3.86□□□□□ -1.79
SHQ1-203ENST00000463369 M0R2T5 61 aa3.82□□□□□ -1.8
SHQ1-203ENST00000463369 LCE1FQ5T754 118 aa3.78□□□□□ -1.8
SHQ1-203ENST00000463369 TNP1P09430 55 aa3.74□□□□□ -1.81
SHQ1-203ENST00000463369 MT2AP02795 61 aa3.7□□□□□ -1.82
SHQ1-203ENST00000463369 LCE1AQ5T7P2 110 aa3.69□□□□□ -1.82
SHQ1-203ENST00000463369 MT1FP04733 61 aa3.67□□□□□ -1.82
SHQ1-203ENST00000463369 KRTAP10-10P60014 251 aa3.67□□□□□ -1.82
SHQ1-203ENST00000463369 MT3P25713 68 aa3.63□□□□□ -1.83
SHQ1-203ENST00000463369 SPRR2GQ9BYE4 73 aa3.58□□□□□ -1.84
SHQ1-203ENST00000463369 KRTAP19-8Q3LI54 63 aa3.51□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms