RNA–Protein interactions for RNA: ENST00000463315.1

SEMA3D-203, Transcript of semaphorin 3D, humanhuman

TSL 2

Gene SEMA3D, Length 1,257 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3D-203ENST00000463315 ATOX1O00244 68 aa6.65□□□□□ -1.34
SEMA3D-203ENST00000463315 A0A087WVE0 104 aa6.64□□□□□ -1.35
SEMA3D-203ENST00000463315 CYP4F30PQ9H0H9 118 aa6.63□□□□□ -1.35
SEMA3D-203ENST00000463315 K7ERU9 68 aa6.61□□□□□ -1.35
SEMA3D-203ENST00000463315 MT2AP02795 61 aa6.61□□□□□ -1.35
SEMA3D-203ENST00000463315 C1orf64Q8NEQ6 169 aa6.59□□□□□ -1.35
SEMA3D-203ENST00000463315 H0Y9P7 68 aa6.58□□□□□ -1.36
SEMA3D-203ENST00000463315 IMUPQ9GZP8 106 aa6.58□□□□□ -1.36
SEMA3D-203ENST00000463315 OCR1Q9BZK8 76 aa6.57□□□□□ -1.36
SEMA3D-203ENST00000463315 MT1FP04733 61 aa6.55□□□□□ -1.36
SEMA3D-203ENST00000463315 KRTAP10-10P60014 251 aa6.55□□□□□ -1.36
SEMA3D-203ENST00000463315 FSIP2Q5CZC0 6907 aa6.54□□□□□ -1.36
SEMA3D-203ENST00000463315 C5orf47Q569G3 176 aa6.54□□□□□ -1.36
SEMA3D-203ENST00000463315 MP68P56378 58 aa6.53□□□□□ -1.36
SEMA3D-203ENST00000463315 H3BPC8 53 aa6.51□□□□□ -1.37
SEMA3D-203ENST00000463315 CRCT1Q9UGL9 99 aa6.51□□□□□ -1.37
SEMA3D-203ENST00000463315 SCGB1A1P11684 91 aa6.5□□□□□ -1.37
SEMA3D-203ENST00000463315 S4R3F8 94 aa6.5□□□□□ -1.37
SEMA3D-203ENST00000463315 LINC00208Q96KT6 92 aa6.49□□□□□ -1.37
SEMA3D-203ENST00000463315 CSAG1Q6PB30 78 aa6.47□□□□□ -1.37
SEMA3D-203ENST00000463315 A8MUN3 132 aa6.46□□□□□ -1.38
SEMA3D-203ENST00000463315 MT-ATP8P03928 68 aa6.45□□□□□ -1.38
SEMA3D-203ENST00000463315 LCA10Q71F78 164 aa6.45□□□□□ -1.38
SEMA3D-203ENST00000463315 SMIM20Q8N5G0 67 aa6.44□□□□□ -1.38
SEMA3D-203ENST00000463315 KLKP1Q107X0 134 aa6.41□□□□□ -1.38
SEMA3D-203ENST00000463315 TRAV7A0A075B6U4 112 aa6.37□□□□□ -1.39
SEMA3D-203ENST00000463315 FAM236AA0A1B0GUQ0 79 aa6.37□□□□□ -1.39
SEMA3D-203ENST00000463315 FAM236BA0A1B0GV22 79 aa6.37□□□□□ -1.39
SEMA3D-203ENST00000463315 USH2AO75445 5202 aa6.36□□□□□ -1.39
SEMA3D-203ENST00000463315 NDUFC1O43677 76 aa6.34□□□□□ -1.39
SEMA3D-203ENST00000463315 DMAC1Q96GE9 116 aa6.3□□□□□ -1.4
SEMA3D-203ENST00000463315 H0YAA0 97 aa6.29□□□□□ -1.4
SEMA3D-203ENST00000463315 CRIPTQ9P021 101 aa6.24□□□□□ -1.41
SEMA3D-203ENST00000463315 SSPOA2VEC9 5147 aa6.24□□□□□ -1.41
SEMA3D-203ENST00000463315 SERP2Q8N6R1 65 aa6.23□□□□□ -1.41
SEMA3D-203ENST00000463315 SPRR2GQ9BYE4 73 aa6.23□□□□□ -1.41
SEMA3D-203ENST00000463315 ACYP2P14621 99 aa6.19□□□□□ -1.42
SEMA3D-203ENST00000463315 KRTAP19-6Q3LI70 58 aa6.19□□□□□ -1.42
SEMA3D-203ENST00000463315 KRTAP19-8Q3LI54 63 aa6.15□□□□□ -1.42
SEMA3D-203ENST00000463315 SPANXA2-OT1Q8N9U9 137 aa6.15□□□□□ -1.42
SEMA3D-203ENST00000463315 SNURFQ9Y675 71 aa6.15□□□□□ -1.42
SEMA3D-203ENST00000463315 C20orf197Q8N268 126 aa6.14□□□□□ -1.43
SEMA3D-203ENST00000463315 FCGBPQ9Y6R7 5405 aaPredicted RBP6.13□□□□□ -1.43
SEMA3D-203ENST00000463315 ADM2Q7Z4H4 148 aa6.12□□□□□ -1.43
SEMA3D-203ENST00000463315 Q5VV11 94 aa6.11□□□□□ -1.43
SEMA3D-203ENST00000463315 SPTSSBQ8NFR3 76 aa6.11□□□□□ -1.43
SEMA3D-203ENST00000463315 MT1BP07438 61 aa6.08□□□□□ -1.44
SEMA3D-203ENST00000463315 COX7CP15954 63 aa6.08□□□□□ -1.44
SEMA3D-203ENST00000463315 CHKB-CPT1BH3BT56 60 aa6.04□□□□□ -1.44
SEMA3D-203ENST00000463315 P0C880 135 aa6□□□□□ -1.45
SEMA3D-203ENST00000463315 R4GN34 69 aa5.99□□□□□ -1.45
SEMA3D-203ENST00000463315 A6NN06 94 aa5.95□□□□□ -1.46
SEMA3D-203ENST00000463315 H7BZZ5 65 aa5.94□□□□□ -1.46
SEMA3D-203ENST00000463315 ANAPC13Q9BS18 74 aa5.94□□□□□ -1.46
SEMA3D-203ENST00000463315 KRTAP10-5P60370 271 aa5.93□□□□□ -1.46
SEMA3D-203ENST00000463315 M0QZ58 72 aa5.92□□□□□ -1.46
SEMA3D-203ENST00000463315 MACF1Q9UPN3 7388 aaKnown RBP5.9□□□□□ -1.46
SEMA3D-203ENST00000463315 COA5Q86WW8 74 aa5.9□□□□□ -1.46
SEMA3D-203ENST00000463315 PLAC4Q8WY50 150 aa5.87□□□□□ -1.47
SEMA3D-203ENST00000463315 CYSTM1Q9H1C7 97 aa5.87□□□□□ -1.47
SEMA3D-203ENST00000463315 LCE1AQ5T7P2 110 aa5.83□□□□□ -1.48
SEMA3D-203ENST00000463315 PRO2289Q9P1D8 64 aa5.83□□□□□ -1.48
SEMA3D-203ENST00000463315 SYNE2Q8WXH0 6885 aaKnown RBP5.8□□□□□ -1.48
SEMA3D-203ENST00000463315 SEC61GP60059 68 aa5.78□□□□□ -1.48
SEMA3D-203ENST00000463315 LINC01554Q52M75 96 aa5.78□□□□□ -1.48
SEMA3D-203ENST00000463315 CCDC179H3BU77 68 aa5.77□□□□□ -1.49
SEMA3D-203ENST00000463315 ATP5EP56381 51 aaPredicted RBP5.77□□□□□ -1.49
SEMA3D-203ENST00000463315 MT1XP80297 61 aa5.75□□□□□ -1.49
SEMA3D-203ENST00000463315 KRTAP6-3Q3LI67 103 aa5.75□□□□□ -1.49
SEMA3D-203ENST00000463315 SERP1Q9Y6X1 66 aa5.75□□□□□ -1.49
SEMA3D-203ENST00000463315 KRTAP13-4Q3LI77 160 aa5.66□□□□□ -1.5
SEMA3D-203ENST00000463315 TMEM258P61165 79 aa5.65□□□□□ -1.5
SEMA3D-203ENST00000463315 A0A1B0GU33 70 aa5.64□□□□□ -1.51
SEMA3D-203ENST00000463315 KRTAP12-2P59991 146 aa5.64□□□□□ -1.51
SEMA3D-203ENST00000463315 A0A1B0GU69 56 aa5.61□□□□□ -1.51
SEMA3D-203ENST00000463315 KRTAP5-9P26371 169 aa5.59□□□□□ -1.51
SEMA3D-203ENST00000463315 SPATA8Q6RVD6 105 aa5.54□□□□□ -1.52
SEMA3D-203ENST00000463315 PRR15LQ9BU68 103 aa5.54□□□□□ -1.52
SEMA3D-203ENST00000463315 CAMK2N1Q7Z7J9 78 aa5.52□□□□□ -1.53
SEMA3D-203ENST00000463315 LINC01558Q9Y6Z2 57 aa5.51□□□□□ -1.53
SEMA3D-203ENST00000463315 SMIM26A0A096LP01 95 aa5.5□□□□□ -1.53
SEMA3D-203ENST00000463315 KRTAP10-12P60413 245 aa5.5□□□□□ -1.53
SEMA3D-203ENST00000463315 A0A0D9SG42 100 aa5.49□□□□□ -1.53
SEMA3D-203ENST00000463315 KMT2DO14686 5537 aa5.46□□□□□ -1.54
SEMA3D-203ENST00000463315 KRTAP10-7P60409 375 aaPredicted RBP5.46□□□□□ -1.54
SEMA3D-203ENST00000463315 KRTAP8-1Q8IUC2 63 aa5.46□□□□□ -1.54
SEMA3D-203ENST00000463315 KRTAP2-2Q9BYT5 123 aa5.46□□□□□ -1.54
SEMA3D-203ENST00000463315 KRTAP12-1P59990 96 aa5.45□□□□□ -1.54
SEMA3D-203ENST00000463315 SPINT4Q6UDR6 99 aa5.43□□□□□ -1.54
SEMA3D-203ENST00000463315 MUC12Q9UKN1 5478 aa5.43□□□□□ -1.54
SEMA3D-203ENST00000463315 NEBP20929 6669 aa5.42□□□□□ -1.54
SEMA3D-203ENST00000463315 SPRR2FQ96RM1 72 aa5.4□□□□□ -1.54
SEMA3D-203ENST00000463315 MDN1Q9NU22 5596 aa5.39□□□□□ -1.55
SEMA3D-203ENST00000463315 UQCR11O14957 56 aa5.36□□□□□ -1.55
SEMA3D-203ENST00000463315 A8MU10 97 aa5.35□□□□□ -1.55
SEMA3D-203ENST00000463315 V9GYY9 64 aa5.35□□□□□ -1.55
SEMA3D-203ENST00000463315 Q1T7F1 81 aa5.3□□□□□ -1.56
SEMA3D-203ENST00000463315 SPRR2EP22531 72 aa5.27□□□□□ -1.57
SEMA3D-203ENST00000463315 SPRR2BP35325 72 aa5.27□□□□□ -1.57
SEMA3D-203ENST00000463315 SPRR2AP35326 72 aa5.27□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 64.4 ms