RNA–Protein interactions for RNA: ENST00000463244.6

CPSF7-209, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 4

Gene CPSF7, Length 545 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-209ENST00000463244 UBL5Q9BZL1 73 aa8.76□□□□□ -1.01
CPSF7-209ENST00000463244 LCE1AQ5T7P2 110 aa8.74□□□□□ -1.01
CPSF7-209ENST00000463244 PRO2289Q9P1D8 64 aa8.74□□□□□ -1.01
CPSF7-209ENST00000463244 MT1XP80297 61 aa8.73□□□□□ -1.01
CPSF7-209ENST00000463244 KRTAP8-1Q8IUC2 63 aa8.73□□□□□ -1.01
CPSF7-209ENST00000463244 CYP4F30PQ9H0H9 118 aa8.72□□□□□ -1.01
CPSF7-209ENST00000463244 TAX1BP3O14907 124 aa8.7□□□□□ -1.02
CPSF7-209ENST00000463244 H0YAA0 97 aa8.69□□□□□ -1.02
CPSF7-209ENST00000463244 A8MUN3 132 aa8.63□□□□□ -1.03
CPSF7-209ENST00000463244 SPRR2DP22532 72 aa8.62□□□□□ -1.03
CPSF7-209ENST00000463244 SMIM6P0DI80 62 aa8.61□□□□□ -1.03
CPSF7-209ENST00000463244 KRTAP12-2P59991 146 aa8.61□□□□□ -1.03
CPSF7-209ENST00000463244 NDUFC1O43677 76 aa8.6□□□□□ -1.03
CPSF7-209ENST00000463244 SPCS1Q9Y6A9 102 aa8.59□□□□□ -1.03
CPSF7-209ENST00000463244 ADM2Q7Z4H4 148 aa8.57□□□□□ -1.04
CPSF7-209ENST00000463244 PLAC4Q8WY50 150 aa8.57□□□□□ -1.04
CPSF7-209ENST00000463244 LOC101927531A0A1B0GV80 90 aa8.56□□□□□ -1.04
CPSF7-209ENST00000463244 K7EP34 96 aa8.55□□□□□ -1.04
CPSF7-209ENST00000463244 TRAV22A0A0B4J277 110 aa8.54□□□□□ -1.04
CPSF7-209ENST00000463244 KRTAP4-8A0A0G2JLE6 195 aa8.51□□□□□ -1.05
CPSF7-209ENST00000463244 KRTAP4-8Q9BYQ9 185 aa8.51□□□□□ -1.05
CPSF7-209ENST00000463244 PRO0461Q9UI25 63 aa8.51□□□□□ -1.05
CPSF7-209ENST00000463244 LCE3BQ5TA77 95 aa8.43□□□□□ -1.06
CPSF7-209ENST00000463244 ACYP1P07311 99 aa8.41□□□□□ -1.06
CPSF7-209ENST00000463244 R4GN34 69 aa8.4□□□□□ -1.06
CPSF7-209ENST00000463244 H0Y9P7 68 aa8.33□□□□□ -1.08
CPSF7-209ENST00000463244 ATOX1O00244 68 aa8.33□□□□□ -1.08
CPSF7-209ENST00000463244 UQCRQO14949 82 aa8.32□□□□□ -1.08
CPSF7-209ENST00000463244 P0C880 135 aa8.32□□□□□ -1.08
CPSF7-209ENST00000463244 KRTAP10-7P60409 375 aaPredicted RBP8.32□□□□□ -1.08
CPSF7-209ENST00000463244 M0QZ58 72 aa8.31□□□□□ -1.08
CPSF7-209ENST00000463244 KRTAP10-12P60413 245 aa8.28□□□□□ -1.08
CPSF7-209ENST00000463244 C20orf197Q8N268 126 aa8.28□□□□□ -1.08
CPSF7-209ENST00000463244 COL5A1-AS1Q5SY13 56 aa8.23□□□□□ -1.09
CPSF7-209ENST00000463244 ETDBQ3ZM63 59 aa8.22□□□□□ -1.09
CPSF7-209ENST00000463244 GPR98Q8WXG9 6306 aa8.21□□□□□ -1.1
CPSF7-209ENST00000463244 LINC01554Q52M75 96 aa8.21□□□□□ -1.1
CPSF7-209ENST00000463244 F8W1H4 67 aa8.17□□□□□ -1.1
CPSF7-209ENST00000463244 KRTAP3-2Q9BYR7 98 aa8.17□□□□□ -1.1
CPSF7-209ENST00000463244 HIST1H4AP62805 103 aaKnown RBP8.15□□□□□ -1.1
CPSF7-209ENST00000463244 LINC00208Q96KT6 92 aa8.15□□□□□ -1.1
CPSF7-209ENST00000463244 GTF2H5Q6ZYL4 71 aa8.14□□□□□ -1.11
CPSF7-209ENST00000463244 ATP5EP2Q5VTU8 51 aa8.13□□□□□ -1.11
CPSF7-209ENST00000463244 DSTQ03001 7570 aaKnown RBP8.09□□□□□ -1.11
CPSF7-209ENST00000463244 LOC105371267A0A1B0GV96 52 aa8.08□□□□□ -1.12
CPSF7-209ENST00000463244 MP68P56378 58 aa8.02□□□□□ -1.13
CPSF7-209ENST00000463244 FAM240AA0A1B0GVK7 77 aa8□□□□□ -1.13
CPSF7-209ENST00000463244 DMAC1Q96GE9 116 aa7.99□□□□□ -1.13
CPSF7-209ENST00000463244 KRTAP4-9Q9BYQ8 210 aa7.98□□□□□ -1.13
CPSF7-209ENST00000463244 OCR1Q9BZK8 76 aa7.97□□□□□ -1.13
CPSF7-209ENST00000463244 MT-ATP8P03928 68 aa7.93□□□□□ -1.14
CPSF7-209ENST00000463244 LCE5AQ5TCM9 118 aa7.9□□□□□ -1.14
CPSF7-209ENST00000463244 LINC00643Q86TS7 51 aa7.85□□□□□ -1.15
CPSF7-209ENST00000463244 H3BPC8 53 aa7.84□□□□□ -1.15
CPSF7-209ENST00000463244 KRTAP19-7Q3SYF9 63 aa7.81□□□□□ -1.16
CPSF7-209ENST00000463244 KRTAP19-3Q7Z4W3 81 aa7.8□□□□□ -1.16
CPSF7-209ENST00000463244 TRAV7A0A075B6U4 112 aa7.79□□□□□ -1.16
CPSF7-209ENST00000463244 MT1EP04732 61 aa7.76□□□□□ -1.17
CPSF7-209ENST00000463244 LCE1DQ5T752 114 aa7.74□□□□□ -1.17
CPSF7-209ENST00000463244 HMCN1Q96RW7 5635 aa7.69□□□□□ -1.18
CPSF7-209ENST00000463244 ACYP2P14621 99 aa7.68□□□□□ -1.18
CPSF7-209ENST00000463244 SPTSSBQ8NFR3 76 aa7.68□□□□□ -1.18
CPSF7-209ENST00000463244 CYSTM1Q9H1C7 97 aa7.65□□□□□ -1.18
CPSF7-209ENST00000463244 CAMK2N1Q7Z7J9 78 aa7.63□□□□□ -1.19
CPSF7-209ENST00000463244 PCP4L1A6NKN8 68 aa7.59□□□□□ -1.19
CPSF7-209ENST00000463244 LCE4AQ5TA78 99 aa7.59□□□□□ -1.19
CPSF7-209ENST00000463244 MT4P47944 62 aa7.58□□□□□ -1.2
CPSF7-209ENST00000463244 KRTAP13-4Q3LI77 160 aa7.58□□□□□ -1.2
CPSF7-209ENST00000463244 SCGB1A1P11684 91 aa7.57□□□□□ -1.2
CPSF7-209ENST00000463244 MT1GP13640 62 aa7.55□□□□□ -1.2
CPSF7-209ENST00000463244 AHNAK2Q8IVF2 5795 aa7.54□□□□□ -1.2
CPSF7-209ENST00000463244 CHKB-CPT1BH3BT56 60 aa7.52□□□□□ -1.21
CPSF7-209ENST00000463244 PP632Q6XCG6 107 aa7.48□□□□□ -1.21
CPSF7-209ENST00000463244 KRTAP19-5Q3LI72 72 aa7.47□□□□□ -1.21
CPSF7-209ENST00000463244 KRTAP5-10Q6L8G5 202 aa7.45□□□□□ -1.22
CPSF7-209ENST00000463244 A0A0D9SG42 100 aa7.44□□□□□ -1.22
CPSF7-209ENST00000463244 MT1MQ8N339 61 aa7.43□□□□□ -1.22
CPSF7-209ENST00000463244 KRTAP5-4Q6L8H1 288 aa7.38□□□□□ -1.23
CPSF7-209ENST00000463244 MT1LQ93083 61 aa7.33□□□□□ -1.24
CPSF7-209ENST00000463244 KRTAP4-6Q9BYQ5 205 aa7.33□□□□□ -1.24
CPSF7-209ENST00000463244 KRTAP4-3Q9BYR4 195 aa7.26□□□□□ -1.25
CPSF7-209ENST00000463244 J3QR89 54 aa7.25□□□□□ -1.25
CPSF7-209ENST00000463244 SMIM20Q8N5G0 67 aa7.23□□□□□ -1.25
CPSF7-209ENST00000463244 KRTAP5-7Q6L8G8 165 aa7.22□□□□□ -1.25
CPSF7-209ENST00000463244 SNURFQ9Y675 71 aa7.2□□□□□ -1.26
CPSF7-209ENST00000463244 SPINT4Q6UDR6 99 aa7.18□□□□□ -1.26
CPSF7-209ENST00000463244 SPANXA2-OT1Q8N9U9 137 aa7.18□□□□□ -1.26
CPSF7-209ENST00000463244 A0A1B0GV90 55 aa7.15□□□□□ -1.26
CPSF7-209ENST00000463244 KRTAP5-3Q6L8H2 238 aa7.15□□□□□ -1.26
CPSF7-209ENST00000463244 SPATA8Q6RVD6 105 aa7.15□□□□□ -1.26
CPSF7-209ENST00000463244 KRTAP12-1P59990 96 aa7.11□□□□□ -1.27
CPSF7-209ENST00000463244 C10orf95Q9H7T3 257 aa7.09□□□□□ -1.27
CPSF7-209ENST00000463244 SEC61GP60059 68 aa7.07□□□□□ -1.28
CPSF7-209ENST00000463244 SERP1Q9Y6X1 66 aa7.07□□□□□ -1.28
CPSF7-209ENST00000463244 LCE3AQ5TA76 89 aa7.05□□□□□ -1.28
CPSF7-209ENST00000463244 A0A1B0GU33 70 aa7.01□□□□□ -1.29
CPSF7-209ENST00000463244 COA5Q86WW8 74 aa7.01□□□□□ -1.29
CPSF7-209ENST00000463244 KRTAP20-2Q3LI61 65 aa6.99□□□□□ -1.29
CPSF7-209ENST00000463244 KRTAP4-7Q9BYR0 210 aa6.95□□□□□ -1.3
CPSF7-209ENST00000463244 SPRR5A0A1B0GTR4 108 aa6.9□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms