RNA–Protein interactions for RNA: ENST00000463233.1

TRABD-205, Transcript of TraB domain containing, humanhuman

TSL 1 (best)

Gene TRABD, Length 2,404 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRABD-205ENST00000463233 MT1HL1P0DM35 61 aa10.7□□□□□ -0.7
TRABD-205ENST00000463233 H3BS24 57 aa10.69□□□□□ -0.7
TRABD-205ENST00000463233 SPATA8Q6RVD6 105 aa10.67□□□□□ -0.7
TRABD-205ENST00000463233 XP32Q5T750 250 aa10.65□□□□□ -0.7
TRABD-205ENST00000463233 RPL37P61927 97 aaKnown RBP10.64□□□□□ -0.71
TRABD-205ENST00000463233 COX6B2Q6YFQ2 88 aa10.6□□□□□ -0.71
TRABD-205ENST00000463233 UQCR11O14957 56 aa10.56□□□□□ -0.72
TRABD-205ENST00000463233 MIR22HGQ0VDD5 57 aa10.53□□□□□ -0.72
TRABD-205ENST00000463233 LPAP08519 4548 aa10.5□□□□□ -0.73
TRABD-205ENST00000463233 LRP2P98164 4655 aa10.48□□□□□ -0.73
TRABD-205ENST00000463233 ABCA13Q86UQ4 5058 aa10.48□□□□□ -0.73
TRABD-205ENST00000463233 KRTAP4-5Q9BYR2 181 aa10.47□□□□□ -0.73
TRABD-205ENST00000463233 CSAG1Q6PB30 78 aa10.45□□□□□ -0.74
TRABD-205ENST00000463233 KRTAP3-3Q9BYR6 98 aa10.36□□□□□ -0.75
TRABD-205ENST00000463233 H0YAA0 97 aa10.35□□□□□ -0.75
TRABD-205ENST00000463233 TPRXLQ17RH7 258 aa10.33□□□□□ -0.76
TRABD-205ENST00000463233 A0A1B0GU33 70 aa10.31□□□□□ -0.76
TRABD-205ENST00000463233 H1FX-AS1Q4G0G2 97 aa10.29□□□□□ -0.76
TRABD-205ENST00000463233 S4R3F8 94 aa10.25□□□□□ -0.77
TRABD-205ENST00000463233 HERC2O95714 4834 aa10.2□□□□□ -0.78
TRABD-205ENST00000463233 KRTAP10-6P60371 365 aaPredicted RBP10.17□□□□□ -0.78
TRABD-205ENST00000463233 KRTAP25-1Q3LHN0 102 aa10.14□□□□□ -0.79
TRABD-205ENST00000463233 KRTAP3-2Q9BYR7 98 aa10.13□□□□□ -0.79
TRABD-205ENST00000463233 ROMO1P60602 79 aa10.12□□□□□ -0.79
TRABD-205ENST00000463233 KRTAP13-4Q3LI77 160 aa10.05□□□□□ -0.8
TRABD-205ENST00000463233 BIRC6Q9NR09 4857 aa10.04□□□□□ -0.8
TRABD-205ENST00000463233 P0C880 135 aa10.03□□□□□ -0.8
TRABD-205ENST00000463233 MUC17Q685J3 4493 aa10.03□□□□□ -0.8
TRABD-205ENST00000463233 J3QL48 77 aa10.02□□□□□ -0.81
TRABD-205ENST00000463233 KRTAP4-1Q9BYQ7 146 aa9.92□□□□□ -0.82
TRABD-205ENST00000463233 SEC61BP60468 96 aaKnown RBP9.91□□□□□ -0.82
TRABD-205ENST00000463233 A0A0D9SG42 100 aa9.91□□□□□ -0.82
TRABD-205ENST00000463233 K7ERS5 55 aa9.82□□□□□ -0.84
TRABD-205ENST00000463233 MUC2Q02817 5179 aa9.74□□□□□ -0.85
TRABD-205ENST00000463233 HERC1Q15751 4861 aa9.74□□□□□ -0.85
TRABD-205ENST00000463233 PCLOQ9Y6V0 5065 aa9.74□□□□□ -0.85
TRABD-205ENST00000463233 KRTAP19-2Q3LHN2 52 aa9.7□□□□□ -0.86
TRABD-205ENST00000463233 KRTAP12-2P59991 146 aa9.68□□□□□ -0.86
TRABD-205ENST00000463233 CRIPTQ9P021 101 aa9.65□□□□□ -0.86
TRABD-205ENST00000463233 HMCN2Q8NDA2 5059 aa9.63□□□□□ -0.87
TRABD-205ENST00000463233 M0QZ58 72 aa9.62□□□□□ -0.87
TRABD-205ENST00000463233 KRTAP12-1P59990 96 aa9.61□□□□□ -0.87
TRABD-205ENST00000463233 SPINT4Q6UDR6 99 aa9.57□□□□□ -0.88
TRABD-205ENST00000463233 LORP23490 312 aaPredicted RBP9.54□□□□□ -0.88
TRABD-205ENST00000463233 R4GN34 69 aa9.48□□□□□ -0.89
TRABD-205ENST00000463233 FLGP20930 4061 aaPredicted RBP9.48□□□□□ -0.89
TRABD-205ENST00000463233 KRTAP15-1Q3LI76 137 aa9.42□□□□□ -0.9
TRABD-205ENST00000463233 NDUFAF8A1L188 74 aa9.37□□□□□ -0.91
TRABD-205ENST00000463233 C10orf95Q9H7T3 257 aa9.34□□□□□ -0.91
TRABD-205ENST00000463233 FAT4Q6V0I7 4981 aa9.33□□□□□ -0.92
TRABD-205ENST00000463233 LCE2CQ5TA81 110 aa9.22□□□□□ -0.93
TRABD-205ENST00000463233 UBR4Q5T4S7 5183 aa9.22□□□□□ -0.93
TRABD-205ENST00000463233 RNF213Q63HN8 5207 aa9.18□□□□□ -0.94
TRABD-205ENST00000463233 A0A0A0MQY5 61 aa9.04□□□□□ -0.96
TRABD-205ENST00000463233 MT1HP80294 61 aa8.97□□□□□ -0.97
TRABD-205ENST00000463233 CAMK2N1Q7Z7J9 78 aa8.96□□□□□ -0.98
TRABD-205ENST00000463233 M0R2T5 61 aa8.92□□□□□ -0.98
TRABD-205ENST00000463233 KRTAP19-1Q8IUB9 90 aa8.82□□□□□ -1
TRABD-205ENST00000463233 SPRR2GQ9BYE4 73 aa8.81□□□□□ -1
TRABD-205ENST00000463233 LUZP6Q538Z0 58 aa8.78□□□□□ -1
TRABD-205ENST00000463233 MT1FP04733 61 aa8.77□□□□□ -1.01
TRABD-205ENST00000463233 MT2AP02795 61 aa8.76□□□□□ -1.01
TRABD-205ENST00000463233 KRTAP9-8Q9BYQ0 159 aa8.73□□□□□ -1.01
TRABD-205ENST00000463233 KRTAP10-10P60014 251 aa8.7□□□□□ -1.02
TRABD-205ENST00000463233 PLAC4Q8WY50 150 aa8.65□□□□□ -1.02
TRABD-205ENST00000463233 LCE2DQ5TA82 110 aaPredicted RBP8.59□□□□□ -1.03
TRABD-205ENST00000463233 TNP1P09430 55 aa8.58□□□□□ -1.04
TRABD-205ENST00000463233 PP632Q6XCG6 107 aa8.56□□□□□ -1.04
TRABD-205ENST00000463233 KRTAP19-8Q3LI54 63 aa8.46□□□□□ -1.05
TRABD-205ENST00000463233 MT1BP07438 61 aa8.41□□□□□ -1.06
TRABD-205ENST00000463233 KRTAP9-3Q9BYQ3 159 aa8.38□□□□□ -1.07
TRABD-205ENST00000463233 KRTAP23-1A1A580 65 aa8.37□□□□□ -1.07
TRABD-205ENST00000463233 KRTAP10-5P60370 271 aa8.28□□□□□ -1.08
TRABD-205ENST00000463233 MT1XP80297 61 aa8.28□□□□□ -1.08
TRABD-205ENST00000463233 LCE3AQ5TA76 89 aa8.24□□□□□ -1.09
TRABD-205ENST00000463233 LCE2AQ5TA79 106 aaPredicted RBP8.15□□□□□ -1.1
TRABD-205ENST00000463233 LCE2BO14633 110 aa8.11□□□□□ -1.11
TRABD-205ENST00000463233 USH2AO75445 5202 aa8.08□□□□□ -1.12
TRABD-205ENST00000463233 KRTAP10-7P60409 375 aaPredicted RBP8.04□□□□□ -1.12
TRABD-205ENST00000463233 SPRR5A0A1B0GTR4 108 aa8.03□□□□□ -1.12
TRABD-205ENST00000463233 KRTAP10-12P60413 245 aa7.99□□□□□ -1.13
TRABD-205ENST00000463233 KRTAP8-1Q8IUC2 63 aa7.99□□□□□ -1.13
TRABD-205ENST00000463233 PRO2289Q9P1D8 64 aa7.92□□□□□ -1.14
TRABD-205ENST00000463233 KRTAP12-3P60328 96 aa7.82□□□□□ -1.16
TRABD-205ENST00000463233 KMT2DO14686 5537 aa7.8□□□□□ -1.16
TRABD-205ENST00000463233 KRTAP19-5Q3LI72 72 aa7.63□□□□□ -1.19
TRABD-205ENST00000463233 KRTAP4-8A0A0G2JLE6 195 aa7.63□□□□□ -1.19
TRABD-205ENST00000463233 KRTAP4-8Q9BYQ9 185 aa7.63□□□□□ -1.19
TRABD-205ENST00000463233 INE1O15225 51 aa7.62□□□□□ -1.19
TRABD-205ENST00000463233 SSPOA2VEC9 5147 aa7.58□□□□□ -1.2
TRABD-205ENST00000463233 FSIP2Q5CZC0 6907 aa7.47□□□□□ -1.21
TRABD-205ENST00000463233 KRTAP19-7Q3SYF9 63 aa7.39□□□□□ -1.23
TRABD-205ENST00000463233 LCE3CQ5T5A8 94 aa7.35□□□□□ -1.23
TRABD-205ENST00000463233 KRTAP19-6Q3LI70 58 aa7.33□□□□□ -1.24
TRABD-205ENST00000463233 MT1EP04732 61 aa7.18□□□□□ -1.26
TRABD-205ENST00000463233 KRTAP4-7Q9BYR0 210 aa7.18□□□□□ -1.26
TRABD-205ENST00000463233 KRTAP9-6A8MVA2 160 aa7.13□□□□□ -1.27
TRABD-205ENST00000463233 MT1LQ93083 61 aa7.13□□□□□ -1.27
TRABD-205ENST00000463233 FCGBPQ9Y6R7 5405 aaPredicted RBP7.09□□□□□ -1.27
TRABD-205ENST00000463233 MUC12Q9UKN1 5478 aa6.96□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 71.5 ms