RNA–Protein interactions for RNA: ENST00000462356.5

LRRC47-202, Transcript of leucine rich repeat containing 47, humanhuman

TSL 2

Gene LRRC47, Length 575 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC47-202ENST00000462356 SCGB1A1P11684 91 aa6.09□□□□□ -1.43
LRRC47-202ENST00000462356 MT-ATP8P03928 68 aa6.07□□□□□ -1.44
LRRC47-202ENST00000462356 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.05□□□□□ -1.44
LRRC47-202ENST00000462356 K7ERU9 68 aa6.04□□□□□ -1.44
LRRC47-202ENST00000462356 KRTAP19-6Q3LI70 58 aa6.04□□□□□ -1.44
LRRC47-202ENST00000462356 NDUFC1O43677 76 aa6.02□□□□□ -1.45
LRRC47-202ENST00000462356 A8MUN3 132 aa6□□□□□ -1.45
LRRC47-202ENST00000462356 H3BPC8 53 aa5.99□□□□□ -1.45
LRRC47-202ENST00000462356 IMUPQ9GZP8 106 aa5.99□□□□□ -1.45
LRRC47-202ENST00000462356 FCGBPQ9Y6R7 5405 aaPredicted RBP5.98□□□□□ -1.45
LRRC47-202ENST00000462356 SPRR2GQ9BYE4 73 aa5.97□□□□□ -1.45
LRRC47-202ENST00000462356 MT1BP07438 61 aa5.96□□□□□ -1.46
LRRC47-202ENST00000462356 KRTAP9-7A8MTY7 169 aa5.95□□□□□ -1.46
LRRC47-202ENST00000462356 Q5VV11 94 aa5.93□□□□□ -1.46
LRRC47-202ENST00000462356 ADM2Q7Z4H4 148 aa5.93□□□□□ -1.46
LRRC47-202ENST00000462356 KRTAP19-8Q3LI54 63 aa5.92□□□□□ -1.46
LRRC47-202ENST00000462356 TRAV7A0A075B6U4 112 aa5.91□□□□□ -1.46
LRRC47-202ENST00000462356 DMAC1Q96GE9 116 aa5.91□□□□□ -1.46
LRRC47-202ENST00000462356 H0YAA0 97 aa5.89□□□□□ -1.47
LRRC47-202ENST00000462356 SMIM20Q8N5G0 67 aa5.88□□□□□ -1.47
LRRC47-202ENST00000462356 CRIPTQ9P021 101 aa5.86□□□□□ -1.47
LRRC47-202ENST00000462356 SNURFQ9Y675 71 aa5.86□□□□□ -1.47
LRRC47-202ENST00000462356 A6NN06 94 aa5.83□□□□□ -1.48
LRRC47-202ENST00000462356 P0C880 135 aa5.82□□□□□ -1.48
LRRC47-202ENST00000462356 ACYP2P14621 99 aa5.8□□□□□ -1.48
LRRC47-202ENST00000462356 MACF1Q9UPN3 7388 aaKnown RBP5.78□□□□□ -1.48
LRRC47-202ENST00000462356 C20orf197Q8N268 126 aa5.78□□□□□ -1.48
LRRC47-202ENST00000462356 KRTAP10-5P60370 271 aa5.77□□□□□ -1.49
LRRC47-202ENST00000462356 SERP2Q8N6R1 65 aa5.76□□□□□ -1.49
LRRC47-202ENST00000462356 R4GN34 69 aa5.73□□□□□ -1.49
LRRC47-202ENST00000462356 M0QZ58 72 aa5.72□□□□□ -1.49
LRRC47-202ENST00000462356 CHKB-CPT1BH3BT56 60 aa5.71□□□□□ -1.5
LRRC47-202ENST00000462356 SYNE2Q8WXH0 6885 aaKnown RBP5.68□□□□□ -1.5
LRRC47-202ENST00000462356 KRTAP6-3Q3LI67 103 aa5.67□□□□□ -1.5
LRRC47-202ENST00000462356 LINC01554Q52M75 96 aa5.67□□□□□ -1.5
LRRC47-202ENST00000462356 SPTSSBQ8NFR3 76 aa5.67□□□□□ -1.5
LRRC47-202ENST00000462356 SPANXA2-OT1Q8N9U9 137 aa5.66□□□□□ -1.5
LRRC47-202ENST00000462356 PLAC4Q8WY50 150 aa5.65□□□□□ -1.5
LRRC47-202ENST00000462356 COX7CP15954 63 aa5.61□□□□□ -1.51
LRRC47-202ENST00000462356 MT1XP80297 61 aa5.6□□□□□ -1.51
LRRC47-202ENST00000462356 CYSTM1Q9H1C7 97 aa5.58□□□□□ -1.52
LRRC47-202ENST00000462356 COA5Q86WW8 74 aa5.56□□□□□ -1.52
LRRC47-202ENST00000462356 PRO2289Q9P1D8 64 aa5.55□□□□□ -1.52
LRRC47-202ENST00000462356 H7BZZ5 65 aa5.51□□□□□ -1.53
LRRC47-202ENST00000462356 KRTAP13-4Q3LI77 160 aa5.48□□□□□ -1.53
LRRC47-202ENST00000462356 ANAPC13Q9BS18 74 aa5.48□□□□□ -1.53
LRRC47-202ENST00000462356 KRTAP5-9P26371 169 aa5.43□□□□□ -1.54
LRRC47-202ENST00000462356 CCDC179H3BU77 68 aa5.41□□□□□ -1.54
LRRC47-202ENST00000462356 SEC61GP60059 68 aa5.39□□□□□ -1.55
LRRC47-202ENST00000462356 KRTAP10-7P60409 375 aaPredicted RBP5.39□□□□□ -1.55
LRRC47-202ENST00000462356 SERP1Q9Y6X1 66 aa5.39□□□□□ -1.55
LRRC47-202ENST00000462356 KRTAP4-8A0A0G2JLE6 195 aa5.38□□□□□ -1.55
LRRC47-202ENST00000462356 KRTAP12-2P59991 146 aa5.38□□□□□ -1.55
LRRC47-202ENST00000462356 KRTAP4-8Q9BYQ9 185 aa5.38□□□□□ -1.55
LRRC47-202ENST00000462356 KRTAP8-1Q8IUC2 63 aa5.36□□□□□ -1.55
LRRC47-202ENST00000462356 SPRR2FQ96RM1 72 aa5.36□□□□□ -1.55
LRRC47-202ENST00000462356 A0A0D9SG42 100 aa5.35□□□□□ -1.55
LRRC47-202ENST00000462356 SPATA8Q6RVD6 105 aa5.35□□□□□ -1.55
LRRC47-202ENST00000462356 KMT2DO14686 5537 aa5.35□□□□□ -1.55
LRRC47-202ENST00000462356 H3BS24 57 aa5.33□□□□□ -1.56
LRRC47-202ENST00000462356 A0A1B0GU33 70 aa5.31□□□□□ -1.56
LRRC47-202ENST00000462356 MUC12Q9UKN1 5478 aa5.3□□□□□ -1.56
LRRC47-202ENST00000462356 CAMK2N1Q7Z7J9 78 aa5.3□□□□□ -1.56
LRRC47-202ENST00000462356 KRTAP10-12P60413 245 aa5.29□□□□□ -1.56
LRRC47-202ENST00000462356 NEBP20929 6669 aa5.27□□□□□ -1.57
LRRC47-202ENST00000462356 A0A1B0GU69 56 aa5.26□□□□□ -1.57
LRRC47-202ENST00000462356 SPRR2EP22531 72 aa5.26□□□□□ -1.57
LRRC47-202ENST00000462356 SPRR2BP35325 72 aa5.26□□□□□ -1.57
LRRC47-202ENST00000462356 SPRR2AP35326 72 aa5.26□□□□□ -1.57
LRRC47-202ENST00000462356 SPINT4Q6UDR6 99 aa5.25□□□□□ -1.57
LRRC47-202ENST00000462356 KRTAP20-1Q3LI63 56 aa5.22□□□□□ -1.57
LRRC47-202ENST00000462356 ATP5EP56381 51 aaPredicted RBP5.19□□□□□ -1.58
LRRC47-202ENST00000462356 KRTAP12-1P59990 96 aa5.19□□□□□ -1.58
LRRC47-202ENST00000462356 LCE1AQ5T7P2 110 aa5.19□□□□□ -1.58
LRRC47-202ENST00000462356 A8MU10 97 aa5.18□□□□□ -1.58
LRRC47-202ENST00000462356 MDN1Q9NU22 5596 aa5.14□□□□□ -1.59
LRRC47-202ENST00000462356 SMIM26A0A096LP01 95 aa5.13□□□□□ -1.59
LRRC47-202ENST00000462356 TMEM258P61165 79 aa5.13□□□□□ -1.59
LRRC47-202ENST00000462356 KRTAP2-3P0C7H8 128 aa5.1□□□□□ -1.59
LRRC47-202ENST00000462356 PRR15LQ9BU68 103 aa5.1□□□□□ -1.59
LRRC47-202ENST00000462356 KRTAP2-4Q9BYR9 128 aa5.1□□□□□ -1.59
LRRC47-202ENST00000462356 LINC01558Q9Y6Z2 57 aa5.1□□□□□ -1.59
LRRC47-202ENST00000462356 LOC100996750A0A140TA64 210 aa5.09□□□□□ -1.59
LRRC47-202ENST00000462356 KRTAP4-6Q9BYQ5 205 aa5.09□□□□□ -1.59
LRRC47-202ENST00000462356 SPRR2DP22532 72 aa5.07□□□□□ -1.6
LRRC47-202ENST00000462356 KRTAP19-7Q3SYF9 63 aa5□□□□□ -1.61
LRRC47-202ENST00000462356 C10orf95Q9H7T3 257 aa4.99□□□□□ -1.61
LRRC47-202ENST00000462356 MT1EP04732 61 aa4.95□□□□□ -1.62
LRRC47-202ENST00000462356 KRTAP2-2Q9BYT5 123 aa4.95□□□□□ -1.62
LRRC47-202ENST00000462356 KRTAP2-1Q9BYU5 128 aa4.95□□□□□ -1.62
LRRC47-202ENST00000462356 UQCR11O14957 56 aa4.94□□□□□ -1.62
LRRC47-202ENST00000462356 KRTAP19-5Q3LI72 72 aa4.93□□□□□ -1.62
LRRC47-202ENST00000462356 LCE3BQ5TA77 95 aa4.92□□□□□ -1.62
LRRC47-202ENST00000462356 TNP1P09430 55 aa4.89□□□□□ -1.63
LRRC47-202ENST00000462356 PSPHP1O15172 72 aa4.88□□□□□ -1.63
LRRC47-202ENST00000462356 LCE3AQ5TA76 89 aa4.88□□□□□ -1.63
LRRC47-202ENST00000462356 KRTAP19-3Q7Z4W3 81 aa4.88□□□□□ -1.63
LRRC47-202ENST00000462356 MIR22HGQ0VDD5 57 aa4.87□□□□□ -1.63
LRRC47-202ENST00000462356 LCE5AQ5TCM9 118 aa4.87□□□□□ -1.63
LRRC47-202ENST00000462356 Q1T7F1 81 aa4.82□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms