RNA–Protein interactions for RNA: ENST00000462322.2

SMKR1-201, Transcript of small lysine rich protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMKR1, Length 1,035 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMKR1-201ENST00000462322 MP68P56378 58 aa10.85□□□□□ -0.67
SMKR1-201ENST00000462322 KLKP1Q107X0 134 aa10.81□□□□□ -0.68
SMKR1-201ENST00000462322 NDUFC1O43677 76 aa10.79□□□□□ -0.68
SMKR1-201ENST00000462322 SPRR2GQ9BYE4 73 aa10.79□□□□□ -0.68
SMKR1-201ENST00000462322 A8MUN3 132 aa10.78□□□□□ -0.68
SMKR1-201ENST00000462322 MACF1Q9UPN3 7388 aaKnown RBP10.77□□□□□ -0.68
SMKR1-201ENST00000462322 Q5VV11 94 aa10.74□□□□□ -0.69
SMKR1-201ENST00000462322 IMUPQ9GZP8 106 aa10.74□□□□□ -0.69
SMKR1-201ENST00000462322 SCGB1A1P11684 91 aa10.72□□□□□ -0.69
SMKR1-201ENST00000462322 MT1BP07438 61 aa10.71□□□□□ -0.69
SMKR1-201ENST00000462322 KRTAP19-8Q3LI54 63 aa10.71□□□□□ -0.69
SMKR1-201ENST00000462322 H3BPC8 53 aa10.68□□□□□ -0.7
SMKR1-201ENST00000462322 SYNE2Q8WXH0 6885 aaKnown RBP10.67□□□□□ -0.7
SMKR1-201ENST00000462322 CRIPTQ9P021 101 aa10.67□□□□□ -0.7
SMKR1-201ENST00000462322 H0YAA0 97 aa10.63□□□□□ -0.71
SMKR1-201ENST00000462322 A6NN06 94 aa10.58□□□□□ -0.72
SMKR1-201ENST00000462322 ADM2Q7Z4H4 148 aa10.56□□□□□ -0.72
SMKR1-201ENST00000462322 K7ERU9 68 aa10.54□□□□□ -0.72
SMKR1-201ENST00000462322 MT-ATP8P03928 68 aa10.53□□□□□ -0.72
SMKR1-201ENST00000462322 DMAC1Q96GE9 116 aa10.51□□□□□ -0.73
SMKR1-201ENST00000462322 KRTAP10-5P60370 271 aa10.45□□□□□ -0.74
SMKR1-201ENST00000462322 SMIM20Q8N5G0 67 aa10.42□□□□□ -0.74
SMKR1-201ENST00000462322 TRAV7A0A075B6U4 112 aa10.41□□□□□ -0.74
SMKR1-201ENST00000462322 KRTAP6-3Q3LI67 103 aa10.41□□□□□ -0.74
SMKR1-201ENST00000462322 C20orf197Q8N268 126 aa10.33□□□□□ -0.76
SMKR1-201ENST00000462322 P0C880 135 aa10.31□□□□□ -0.76
SMKR1-201ENST00000462322 ACYP2P14621 99 aa10.29□□□□□ -0.76
SMKR1-201ENST00000462322 R4GN34 69 aa10.28□□□□□ -0.76
SMKR1-201ENST00000462322 KRTAP3-2Q9BYR7 98 aa10.22□□□□□ -0.77
SMKR1-201ENST00000462322 M0QZ58 72 aa10.21□□□□□ -0.77
SMKR1-201ENST00000462322 SNURFQ9Y675 71 aa10.2□□□□□ -0.78
SMKR1-201ENST00000462322 PLAC4Q8WY50 150 aa10.19□□□□□ -0.78
SMKR1-201ENST00000462322 SPTSSBQ8NFR3 76 aa10.17□□□□□ -0.78
SMKR1-201ENST00000462322 CHKB-CPT1BH3BT56 60 aa10.13□□□□□ -0.79
SMKR1-201ENST00000462322 PRO2289Q9P1D8 64 aa10.12□□□□□ -0.79
SMKR1-201ENST00000462322 SERP2Q8N6R1 65 aa10.09□□□□□ -0.79
SMKR1-201ENST00000462322 LINC01554Q52M75 96 aa10.08□□□□□ -0.8
SMKR1-201ENST00000462322 MT1XP80297 61 aa10.06□□□□□ -0.8
SMKR1-201ENST00000462322 SPANXA2-OT1Q8N9U9 137 aa10.04□□□□□ -0.8
SMKR1-201ENST00000462322 NEBP20929 6669 aa10.03□□□□□ -0.8
SMKR1-201ENST00000462322 MUC12Q9UKN1 5478 aa9.99□□□□□ -0.81
SMKR1-201ENST00000462322 KRTAP5-9P26371 169 aa9.95□□□□□ -0.82
SMKR1-201ENST00000462322 KMT2DO14686 5537 aa9.87□□□□□ -0.83
SMKR1-201ENST00000462322 KRTAP12-2P59991 146 aa9.8□□□□□ -0.84
SMKR1-201ENST00000462322 COX7CP15954 63 aa9.78□□□□□ -0.84
SMKR1-201ENST00000462322 COA5Q86WW8 74 aa9.77□□□□□ -0.85
SMKR1-201ENST00000462322 MDN1Q9NU22 5596 aa9.76□□□□□ -0.85
SMKR1-201ENST00000462322 SPRR2FQ96RM1 72 aa9.73□□□□□ -0.85
SMKR1-201ENST00000462322 KRTAP8-1Q8IUC2 63 aa9.72□□□□□ -0.85
SMKR1-201ENST00000462322 KRTAP13-4Q3LI77 160 aa9.66□□□□□ -0.86
SMKR1-201ENST00000462322 H7BZZ5 65 aa9.62□□□□□ -0.87
SMKR1-201ENST00000462322 KRTAP4-8A0A0G2JLE6 195 aa9.61□□□□□ -0.87
SMKR1-201ENST00000462322 KRTAP10-7P60409 375 aaPredicted RBP9.61□□□□□ -0.87
SMKR1-201ENST00000462322 KRTAP20-1Q3LI63 56 aa9.61□□□□□ -0.87
SMKR1-201ENST00000462322 KRTAP4-8Q9BYQ9 185 aa9.61□□□□□ -0.87
SMKR1-201ENST00000462322 CYSTM1Q9H1C7 97 aa9.61□□□□□ -0.87
SMKR1-201ENST00000462322 SEC61GP60059 68 aa9.6□□□□□ -0.87
SMKR1-201ENST00000462322 SERP1Q9Y6X1 66 aa9.57□□□□□ -0.88
SMKR1-201ENST00000462322 SPRR2EP22531 72 aa9.56□□□□□ -0.88
SMKR1-201ENST00000462322 SPRR2BP35325 72 aa9.56□□□□□ -0.88
SMKR1-201ENST00000462322 SPRR2AP35326 72 aa9.56□□□□□ -0.88
SMKR1-201ENST00000462322 KRTAP10-12P60413 245 aa9.56□□□□□ -0.88
SMKR1-201ENST00000462322 ANAPC13Q9BS18 74 aa9.5□□□□□ -0.89
SMKR1-201ENST00000462322 CAMK2N1Q7Z7J9 78 aa9.49□□□□□ -0.89
SMKR1-201ENST00000462322 A0A0D9SG42 100 aa9.42□□□□□ -0.9
SMKR1-201ENST00000462322 LCE1AQ5T7P2 110 aa9.42□□□□□ -0.9
SMKR1-201ENST00000462322 A0A1B0GU33 70 aa9.41□□□□□ -0.9
SMKR1-201ENST00000462322 SPATA8Q6RVD6 105 aa9.4□□□□□ -0.9
SMKR1-201ENST00000462322 KRTAP2-3P0C7H8 128 aa9.39□□□□□ -0.91
SMKR1-201ENST00000462322 KRTAP2-4Q9BYR9 128 aa9.39□□□□□ -0.91
SMKR1-201ENST00000462322 CCDC179H3BU77 68 aa9.3□□□□□ -0.92
SMKR1-201ENST00000462322 A0A1B0GU69 56 aa9.28□□□□□ -0.92
SMKR1-201ENST00000462322 SPINT4Q6UDR6 99 aa9.28□□□□□ -0.92
SMKR1-201ENST00000462322 SPRR2DP22532 72 aa9.24□□□□□ -0.93
SMKR1-201ENST00000462322 KRTAP12-1P59990 96 aa9.19□□□□□ -0.94
SMKR1-201ENST00000462322 ATP5EP56381 51 aaPredicted RBP9.16□□□□□ -0.94
SMKR1-201ENST00000462322 SMIM26A0A096LP01 95 aa9.14□□□□□ -0.95
SMKR1-201ENST00000462322 KRTAP2-2Q9BYT5 123 aa9.09□□□□□ -0.95
SMKR1-201ENST00000462322 KRTAP2-1Q9BYU5 128 aa9.09□□□□□ -0.95
SMKR1-201ENST00000462322 A8MU10 97 aa9.07□□□□□ -0.96
SMKR1-201ENST00000462322 PRR15LQ9BU68 103 aa9.03□□□□□ -0.96
SMKR1-201ENST00000462322 KRTAP19-7Q3SYF9 63 aa8.99□□□□□ -0.97
SMKR1-201ENST00000462322 LCE3BQ5TA77 95 aa8.97□□□□□ -0.97
SMKR1-201ENST00000462322 TMEM258P61165 79 aa8.95□□□□□ -0.98
SMKR1-201ENST00000462322 LINC01558Q9Y6Z2 57 aa8.94□□□□□ -0.98
SMKR1-201ENST00000462322 MT1EP04732 61 aa8.92□□□□□ -0.98
SMKR1-201ENST00000462322 LCE5AQ5TCM9 118 aa8.83□□□□□ -1
SMKR1-201ENST00000462322 KRTAP19-3Q7Z4W3 81 aa8.82□□□□□ -1
SMKR1-201ENST00000462322 KRTAP19-5Q3LI72 72 aa8.81□□□□□ -1
SMKR1-201ENST00000462322 C10orf95Q9H7T3 257 aa8.79□□□□□ -1
SMKR1-201ENST00000462322 TNP1P09430 55 aa8.75□□□□□ -1.01
SMKR1-201ENST00000462322 UQCR11O14957 56 aa8.73□□□□□ -1.01
SMKR1-201ENST00000462322 LCE3AQ5TA76 89 aa8.66□□□□□ -1.02
SMKR1-201ENST00000462322 MT1GP13640 62 aa8.63□□□□□ -1.03
SMKR1-201ENST00000462322 DSTQ03001 7570 aaKnown RBP8.63□□□□□ -1.03
SMKR1-201ENST00000462322 PP632Q6XCG6 107 aa8.58□□□□□ -1.04
SMKR1-201ENST00000462322 MIR22HGQ0VDD5 57 aa8.54□□□□□ -1.04
SMKR1-201ENST00000462322 MT1LQ93083 61 aa8.54□□□□□ -1.04
SMKR1-201ENST00000462322 MT1MQ8N339 61 aa8.49□□□□□ -1.05
SMKR1-201ENST00000462322 V9GYY9 64 aa8.47□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 77.2 ms