RNA–Protein interactions for RNA: ENST00000462289.1

VPS36-202, Transcript of vacuolar protein sorting 36 homolog, humanhuman

TSL 2

Gene VPS36, Length 544 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-202ENST00000462289 Q8N9L7 120 aa2.89□□□□□ -1.95
VPS36-202ENST00000462289 NDUFAF8A1L188 74 aa2.87□□□□□ -1.95
VPS36-202ENST00000462289 HCG22E2RYF7 251 aa2.87□□□□□ -1.95
VPS36-202ENST00000462289 ATP5EP2Q5VTU8 51 aa2.87□□□□□ -1.95
VPS36-202ENST00000462289 Q5W150 140 aa2.87□□□□□ -1.95
VPS36-202ENST00000462289 SPINK7P58062 85 aa2.86□□□□□ -1.95
VPS36-202ENST00000462289 LCE3AQ5TA76 89 aa2.86□□□□□ -1.95
VPS36-202ENST00000462289 CASC2Q6XLA1 102 aa2.86□□□□□ -1.95
VPS36-202ENST00000462289 LINC00643Q86TS7 51 aa2.85□□□□□ -1.95
VPS36-202ENST00000462289 WFDC13Q8IUB5 93 aa2.84□□□□□ -1.95
VPS36-202ENST00000462289 TP53AIP1Q9HCN2 124 aa2.82□□□□□ -1.96
VPS36-202ENST00000462289 KRTAP12-2P59991 146 aa2.8□□□□□ -1.96
VPS36-202ENST00000462289 COX6B2Q6YFQ2 88 aa2.8□□□□□ -1.96
VPS36-202ENST00000462289 C7orf65Q6ZTY9 151 aa2.8□□□□□ -1.96
VPS36-202ENST00000462289 RBM12B-AS1Q9P1G2 102 aa2.8□□□□□ -1.96
VPS36-202ENST00000462289 J3QR89 54 aa2.79□□□□□ -1.96
VPS36-202ENST00000462289 NDUFS5O43920 106 aa2.78□□□□□ -1.96
VPS36-202ENST00000462289 OCR1Q9BZK8 76 aa2.78□□□□□ -1.96
VPS36-202ENST00000462289 IMUPQ9GZP8 106 aa2.78□□□□□ -1.96
VPS36-202ENST00000462289 A0A087WVE0 104 aa2.77□□□□□ -1.97
VPS36-202ENST00000462289 HIST1H4AP62805 103 aaKnown RBP2.77□□□□□ -1.97
VPS36-202ENST00000462289 TRAV22A0A0B4J277 110 aa2.76□□□□□ -1.97
VPS36-202ENST00000462289 UQCRQO14949 82 aa2.76□□□□□ -1.97
VPS36-202ENST00000462289 MT2AP02795 61 aa2.76□□□□□ -1.97
VPS36-202ENST00000462289 H1FX-AS1Q4G0G2 97 aa2.76□□□□□ -1.97
VPS36-202ENST00000462289 CYP4F30PQ9H0H9 118 aa2.76□□□□□ -1.97
VPS36-202ENST00000462289 K7ERU9 68 aa2.75□□□□□ -1.97
VPS36-202ENST00000462289 LOC101927531A0A1B0GV80 90 aa2.74□□□□□ -1.97
VPS36-202ENST00000462289 MT1FP04733 61 aa2.74□□□□□ -1.97
VPS36-202ENST00000462289 FAM236DA0A1B0GTK5 79 aa2.73□□□□□ -1.97
VPS36-202ENST00000462289 M0R2T5 61 aa2.73□□□□□ -1.97
VPS36-202ENST00000462289 ATOX1O00244 68 aa2.73□□□□□ -1.97
VPS36-202ENST00000462289 FAM236CP0DP71 79 aa2.73□□□□□ -1.97
VPS36-202ENST00000462289 C4orf26Q17RF5 130 aa2.73□□□□□ -1.97
VPS36-202ENST00000462289 MT-ATP8P03928 68 aa2.72□□□□□ -1.97
VPS36-202ENST00000462289 PRAC1Q96KF2 57 aa2.72□□□□□ -1.97
VPS36-202ENST00000462289 A8MU10 97 aa2.71□□□□□ -1.98
VPS36-202ENST00000462289 H3BPC8 53 aa2.71□□□□□ -1.98
VPS36-202ENST00000462289 FSIP2Q5CZC0 6907 aa2.7□□□□□ -1.98
VPS36-202ENST00000462289 H0Y9P7 68 aa2.7□□□□□ -1.98
VPS36-202ENST00000462289 C5orf47Q569G3 176 aa2.7□□□□□ -1.98
VPS36-202ENST00000462289 KRTAP5-5Q701N2 237 aaPredicted RBP2.69□□□□□ -1.98
VPS36-202ENST00000462289 C1orf64Q8NEQ6 169 aa2.69□□□□□ -1.98
VPS36-202ENST00000462289 KLKP1Q107X0 134 aa2.68□□□□□ -1.98
VPS36-202ENST00000462289 A8MUN3 132 aa2.67□□□□□ -1.98
VPS36-202ENST00000462289 LCA10Q71F78 164 aa2.67□□□□□ -1.98
VPS36-202ENST00000462289 USH2AO75445 5202 aa2.66□□□□□ -1.98
VPS36-202ENST00000462289 TRAV7A0A075B6U4 112 aa2.66□□□□□ -1.98
VPS36-202ENST00000462289 SMIM20Q8N5G0 67 aa2.66□□□□□ -1.98
VPS36-202ENST00000462289 LINC00208Q96KT6 92 aa2.66□□□□□ -1.98
VPS36-202ENST00000462289 FAM236AA0A1B0GUQ0 79 aa2.65□□□□□ -1.99
VPS36-202ENST00000462289 FAM236BA0A1B0GV22 79 aa2.65□□□□□ -1.99
VPS36-202ENST00000462289 MP68P56378 58 aa2.65□□□□□ -1.99
VPS36-202ENST00000462289 CRCT1Q9UGL9 99 aa2.65□□□□□ -1.99
VPS36-202ENST00000462289 S4R3F8 94 aa2.65□□□□□ -1.99
VPS36-202ENST00000462289 H0YAA0 97 aa2.64□□□□□ -1.99
VPS36-202ENST00000462289 KRTAP10-10P60014 251 aa2.64□□□□□ -1.99
VPS36-202ENST00000462289 DMAC1Q96GE9 116 aa2.64□□□□□ -1.99
VPS36-202ENST00000462289 SSPOA2VEC9 5147 aa2.64□□□□□ -1.99
VPS36-202ENST00000462289 CSAG1Q6PB30 78 aa2.63□□□□□ -1.99
VPS36-202ENST00000462289 SPRR2GQ9BYE4 73 aa2.62□□□□□ -1.99
VPS36-202ENST00000462289 SCGB1A1P11684 91 aa2.61□□□□□ -1.99
VPS36-202ENST00000462289 SERP2Q8N6R1 65 aa2.61□□□□□ -1.99
VPS36-202ENST00000462289 KRTAP19-8Q3LI54 63 aa2.6□□□□□ -1.99
VPS36-202ENST00000462289 KRTAP19-6Q3LI70 58 aa2.59□□□□□ -1.99
VPS36-202ENST00000462289 SPANXA2-OT1Q8N9U9 137 aa2.59□□□□□ -1.99
VPS36-202ENST00000462289 NDUFC1O43677 76 aa2.57□□□□□ -2
VPS36-202ENST00000462289 MT1BP07438 61 aa2.57□□□□□ -2
VPS36-202ENST00000462289 FCGBPQ9Y6R7 5405 aaPredicted RBP2.57□□□□□ -2
VPS36-202ENST00000462289 KRTAP5-8O75690 187 aa2.56□□□□□ -2
VPS36-202ENST00000462289 CRIPTQ9P021 101 aa2.56□□□□□ -2
VPS36-202ENST00000462289 COX7CP15954 63 aa2.55□□□□□ -2
VPS36-202ENST00000462289 SEC61GP60059 68 aa2.55□□□□□ -2
VPS36-202ENST00000462289 LCE1CQ5T751 118 aa2.54□□□□□ -2
VPS36-202ENST00000462289 LCE1BQ5T7P3 118 aa2.54□□□□□ -2
VPS36-202ENST00000462289 C20orf197Q8N268 126 aa2.54□□□□□ -2
VPS36-202ENST00000462289 SNURFQ9Y675 71 aa2.54□□□□□ -2
VPS36-202ENST00000462289 H7BZZ5 65 aa2.53□□□□□ -2
VPS36-202ENST00000462289 ACYP2P14621 99 aa2.53□□□□□ -2
VPS36-202ENST00000462289 CYSTM1Q9H1C7 97 aa2.52□□□□□ -2.01
VPS36-202ENST00000462289 P0C880 135 aa2.5□□□□□ -2.01
VPS36-202ENST00000462289 ADM2Q7Z4H4 148 aa2.49□□□□□ -2.01
VPS36-202ENST00000462289 MACF1Q9UPN3 7388 aaKnown RBP2.49□□□□□ -2.01
VPS36-202ENST00000462289 Q5VV11 94 aa2.48□□□□□ -2.01
VPS36-202ENST00000462289 COA5Q86WW8 74 aa2.45□□□□□ -2.02
VPS36-202ENST00000462289 SPTSSBQ8NFR3 76 aa2.45□□□□□ -2.02
VPS36-202ENST00000462289 ANAPC13Q9BS18 74 aa2.45□□□□□ -2.02
VPS36-202ENST00000462289 CCDC179H3BU77 68 aa2.43□□□□□ -2.02
VPS36-202ENST00000462289 V9GYY9 64 aa2.43□□□□□ -2.02
VPS36-202ENST00000462289 SYNE2Q8WXH0 6885 aaKnown RBP2.42□□□□□ -2.02
VPS36-202ENST00000462289 A6NN06 94 aa2.42□□□□□ -2.02
VPS36-202ENST00000462289 M0QZ58 72 aa2.42□□□□□ -2.02
VPS36-202ENST00000462289 MT1XP80297 61 aa2.42□□□□□ -2.02
VPS36-202ENST00000462289 CHKB-CPT1BH3BT56 60 aa2.41□□□□□ -2.02
VPS36-202ENST00000462289 R4GN34 69 aa2.41□□□□□ -2.02
VPS36-202ENST00000462289 ATP5EP56381 51 aaPredicted RBP2.4□□□□□ -2.03
VPS36-202ENST00000462289 KRTAP13-4Q3LI77 160 aa2.4□□□□□ -2.03
VPS36-202ENST00000462289 TMEM258P61165 79 aa2.37□□□□□ -2.03
VPS36-202ENST00000462289 KRTAP6-3Q3LI67 103 aa2.37□□□□□ -2.03
VPS36-202ENST00000462289 PLAC4Q8WY50 150 aa2.34□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 65.2 ms