RNA–Protein interactions for RNA: ENST00000461608.1

HDAC6-212, Transcript of histone deacetylase 6, humanhuman

TSL 2

Gene HDAC6, Length 397 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-212ENST00000461608 DEFB105AQ8NG35 78 aa0.47□□□□□ -2.33
HDAC6-212ENST00000461608 UBL5Q9BZL1 73 aa0.47□□□□□ -2.33
HDAC6-212ENST00000461608 DNAH3Q8TD57 4116 aa0.46□□□□□ -2.34
HDAC6-212ENST00000461608 STAB2Q8WWQ8 2551 aa0.46□□□□□ -2.34
HDAC6-212ENST00000461608 CRIP1P50238 77 aa0.46□□□□□ -2.34
HDAC6-212ENST00000461608 MINOS1Q5TGZ0 78 aa0.46□□□□□ -2.34
HDAC6-212ENST00000461608 RPS27LQ71UM5 84 aaKnown RBP0.46□□□□□ -2.34
HDAC6-212ENST00000461608 HMCN2Q8NDA2 5059 aa0.46□□□□□ -2.34
HDAC6-212ENST00000461608 RNF213Q63HN8 5207 aa0.46□□□□□ -2.34
HDAC6-212ENST00000461608 KMT2AQ03164 3969 aa0.46□□□□□ -2.34
HDAC6-212ENST00000461608 DNAH7Q8WXX0 4024 aa0.46□□□□□ -2.34
HDAC6-212ENST00000461608 DNAH9Q9NYC9 4486 aa0.46□□□□□ -2.34
HDAC6-212ENST00000461608 HECTD4Q9Y4D8 3996 aa0.46□□□□□ -2.34
HDAC6-212ENST00000461608 H3BSH0 61 aa0.45□□□□□ -2.34
HDAC6-212ENST00000461608 PRH1P02810 166 aa0.45□□□□□ -2.34
HDAC6-212ENST00000461608 DEFB136Q30KP8 78 aa0.45□□□□□ -2.34
HDAC6-212ENST00000461608 FRAS1Q86XX4 4008 aa0.45□□□□□ -2.34
HDAC6-212ENST00000461608 FAT4Q6V0I7 4981 aa0.45□□□□□ -2.34
HDAC6-212ENST00000461608 MUC2Q02817 5179 aa0.45□□□□□ -2.34
HDAC6-212ENST00000461608 DNAH1Q9P2D7 4330 aa0.45□□□□□ -2.34
HDAC6-212ENST00000461608 DYNC2H1Q8NCM8 4307 aaKnown RBP0.45□□□□□ -2.34
HDAC6-212ENST00000461608 ETDCA0A1B0GVM5 59 aa0.44□□□□□ -2.34
HDAC6-212ENST00000461608 H3BUA1 57 aa0.44□□□□□ -2.34
HDAC6-212ENST00000461608 LINC00158P58513 81 aa0.44□□□□□ -2.34
HDAC6-212ENST00000461608 DEFB114Q30KQ6 69 aa0.44□□□□□ -2.34
HDAC6-212ENST00000461608 Q5VSD8 79 aa0.44□□□□□ -2.34
HDAC6-212ENST00000461608 WFDC13Q8IUB5 93 aa0.44□□□□□ -2.34
HDAC6-212ENST00000461608 CDKN2A-AS1Q9UH64 79 aa0.44□□□□□ -2.34
HDAC6-212ENST00000461608 HUWE1Q7Z6Z7 4374 aaKnown RBP0.44□□□□□ -2.34
HDAC6-212ENST00000461608 DMBT1Q9UGM3 2413 aaPredicted RBP0.44□□□□□ -2.34
HDAC6-212ENST00000461608 DYNC1H1Q14204 4646 aaKnown RBP0.43□□□□□ -2.34
HDAC6-212ENST00000461608 MYCBP2O75592 4640 aa0.43□□□□□ -2.34
HDAC6-212ENST00000461608 DNAH5Q8TE73 4624 aa0.43□□□□□ -2.34
HDAC6-212ENST00000461608 DEFB131BA0A096LNP1 70 aa0.43□□□□□ -2.34
HDAC6-212ENST00000461608 DEFB135Q30KP9 77 aa0.43□□□□□ -2.34
HDAC6-212ENST00000461608 DEFB104AQ8WTQ1 72 aa0.43□□□□□ -2.34
HDAC6-212ENST00000461608 KCNQ1DNQ9H478 68 aa0.43□□□□□ -2.34
HDAC6-212ENST00000461608 ALMS1Q8TCU4 4167 aa0.43□□□□□ -2.34
HDAC6-212ENST00000461608 DNAH11Q96DT5 4516 aa0.43□□□□□ -2.34
HDAC6-212ENST00000461608 LRP2P98164 4655 aa0.43□□□□□ -2.34
HDAC6-212ENST00000461608 APOBP04114 4563 aaKnown RBP0.42□□□□□ -2.34
HDAC6-212ENST00000461608 DEFB4AO15263 64 aa0.42□□□□□ -2.34
HDAC6-212ENST00000461608 SMR3BP02814 79 aaPredicted RBP0.42□□□□□ -2.34
HDAC6-212ENST00000461608 SPART-AS1P0CW21 52 aa0.42□□□□□ -2.34
HDAC6-212ENST00000461608 RPS27P42677 84 aaKnown RBP0.42□□□□□ -2.34
HDAC6-212ENST00000461608 KRTAP21-1Q3LI58 79 aa0.42□□□□□ -2.34
HDAC6-212ENST00000461608 LINC01590Q5TEZ4 76 aa0.42□□□□□ -2.34
HDAC6-212ENST00000461608 SPINK6Q6UWN8 80 aa0.42□□□□□ -2.34
HDAC6-212ENST00000461608 LEAP2Q969E1 77 aa0.42□□□□□ -2.34
HDAC6-212ENST00000461608 CMC2Q9NRP2 79 aa0.42□□□□□ -2.34
HDAC6-212ENST00000461608 DNAH6Q9C0G6 4158 aa0.42□□□□□ -2.34
HDAC6-212ENST00000461608 FSIP2Q5CZC0 6907 aa0.42□□□□□ -2.34
HDAC6-212ENST00000461608 VPS13DQ5THJ4 4388 aa0.42□□□□□ -2.34
HDAC6-212ENST00000461608 PKHD1P08F94 4074 aa0.42□□□□□ -2.34
HDAC6-212ENST00000461608 FAT2Q9NYQ8 4349 aa0.42□□□□□ -2.34
HDAC6-212ENST00000461608 LRP1BQ9NZR2 4599 aa0.42□□□□□ -2.34
HDAC6-212ENST00000461608 HSPG2P98160 4391 aa0.41□□□□□ -2.34
HDAC6-212ENST00000461608 DNAH10Q8IVF4 4471 aa0.41□□□□□ -2.34
HDAC6-212ENST00000461608 H3BNG1 76 aa0.41□□□□□ -2.34
HDAC6-212ENST00000461608 KRTAP2-3P0C7H8 128 aa0.41□□□□□ -2.34
HDAC6-212ENST00000461608 MT1HL1P0DM35 61 aa0.41□□□□□ -2.34
HDAC6-212ENST00000461608 SNRPGP62308 76 aaKnown RBP0.41□□□□□ -2.34
HDAC6-212ENST00000461608 RPL39P5Q59GN2 51 aa0.41□□□□□ -2.34
HDAC6-212ENST00000461608 RHPN1-AS1Q9BWJ2 59 aa0.41□□□□□ -2.34
HDAC6-212ENST00000461608 KRTAP2-4Q9BYR9 128 aa0.41□□□□□ -2.34
HDAC6-212ENST00000461608 KRTAP2-1Q9BYU5 128 aa0.41□□□□□ -2.34
HDAC6-212ENST00000461608 ABRACLQ9P1F3 81 aa0.41□□□□□ -2.34
HDAC6-212ENST00000461608 FAT1Q14517 4588 aa0.41□□□□□ -2.34
HDAC6-212ENST00000461608 VPS13BQ7Z7G8 4022 aa0.41□□□□□ -2.34
HDAC6-212ENST00000461608 DNAH2Q9P225 4427 aa0.41□□□□□ -2.34
HDAC6-212ENST00000461608 DNAH17Q9UFH2 4485 aa0.4□□□□□ -2.34
HDAC6-212ENST00000461608 H0YAA0 97 aa0.4□□□□□ -2.35
HDAC6-212ENST00000461608 SPINK4O60575 86 aa0.4□□□□□ -2.35
HDAC6-212ENST00000461608 APELAP0DMC3 54 aa0.4□□□□□ -2.35
HDAC6-212ENST00000461608 HTN3P15516 51 aa0.4□□□□□ -2.35
HDAC6-212ENST00000461608 DEFB131AP59861 70 aa0.4□□□□□ -2.35
HDAC6-212ENST00000461608 COX6B2Q6YFQ2 88 aa0.4□□□□□ -2.35
HDAC6-212ENST00000461608 TMEM167AQ8TBQ9 72 aa0.4□□□□□ -2.35
HDAC6-212ENST00000461608 TTTY10Q9BZA0 68 aa0.4□□□□□ -2.35
HDAC6-212ENST00000461608 NMES1Q9C002 83 aa0.4□□□□□ -2.35
HDAC6-212ENST00000461608 FAT3Q8TDW7 4589 aa0.4□□□□□ -2.35
HDAC6-212ENST00000461608 LRP1Q07954 4544 aaKnown RBP0.39□□□□□ -2.35
HDAC6-212ENST00000461608 SRRM2Q9UQ35 2752 aaKnown RBP0.39□□□□□ -2.35
HDAC6-212ENST00000461608 A0A096LPF7 62 aa0.39□□□□□ -2.35
HDAC6-212ENST00000461608 A8MTW9 85 aa0.39□□□□□ -2.35
HDAC6-212ENST00000461608 K7EIM0 57 aa0.39□□□□□ -2.35
HDAC6-212ENST00000461608 DEFB130BP0DP73 79 aa0.39□□□□□ -2.35
HDAC6-212ENST00000461608 DEFB130AP0DP74 79 aa0.39□□□□□ -2.35
HDAC6-212ENST00000461608 PRCDQ00LT1 54 aa0.39□□□□□ -2.35
HDAC6-212ENST00000461608 WT1-ASQ06250 92 aa0.39□□□□□ -2.35
HDAC6-212ENST00000461608 LINC01556Q5JQF7 62 aa0.39□□□□□ -2.35
HDAC6-212ENST00000461608 TIMM8BQ9Y5J9 83 aaPredicted RBP0.39□□□□□ -2.35
HDAC6-212ENST00000461608 PKD1P98161 4303 aa0.39□□□□□ -2.35
HDAC6-212ENST00000461608 USH2AO75445 5202 aa0.39□□□□□ -2.35
HDAC6-212ENST00000461608 SSPOA2VEC9 5147 aa0.38□□□□□ -2.35
HDAC6-212ENST00000461608 IGIPA6NJ69 53 aa0.38□□□□□ -2.35
HDAC6-212ENST00000461608 SPINK1P00995 79 aa0.38□□□□□ -2.35
HDAC6-212ENST00000461608 WFDC10BQ8IUB3 73 aa0.38□□□□□ -2.35
HDAC6-212ENST00000461608 ARHGAP5-AS1Q96IT6 56 aa0.38□□□□□ -2.35
HDAC6-212ENST00000461608 NOP10Q9NPE3 64 aaKnown RBP0.38□□□□□ -2.35
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms