RNA–Protein interactions for RNA: ENST00000461195.5

TRAF4-207, Transcript of TNF receptor associated factor 4, humanhuman

TSL 2

Gene TRAF4, Length 787 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-207ENST00000461195 KRTAP3-3Q9BYR6 98 aa10.3□□□□□ -0.76
TRAF4-207ENST00000461195 LINC00208Q96KT6 92 aa10.25□□□□□ -0.77
TRAF4-207ENST00000461195 OCR1Q9BZK8 76 aa10.25□□□□□ -0.77
TRAF4-207ENST00000461195 MP68P56378 58 aa10.22□□□□□ -0.77
TRAF4-207ENST00000461195 KLKP1Q107X0 134 aa10.18□□□□□ -0.78
TRAF4-207ENST00000461195 A8MUN3 132 aa10.16□□□□□ -0.78
TRAF4-207ENST00000461195 NDUFC1O43677 76 aa10.14□□□□□ -0.79
TRAF4-207ENST00000461195 KRTAP6-3Q3LI67 103 aa10.14□□□□□ -0.79
TRAF4-207ENST00000461195 SPRR2GQ9BYE4 73 aa10.14□□□□□ -0.79
TRAF4-207ENST00000461195 SCGB1A1P11684 91 aa10.1□□□□□ -0.79
TRAF4-207ENST00000461195 IMUPQ9GZP8 106 aa10.1□□□□□ -0.79
TRAF4-207ENST00000461195 H3BPC8 53 aa10.09□□□□□ -0.79
TRAF4-207ENST00000461195 Q5VV11 94 aa10.07□□□□□ -0.8
TRAF4-207ENST00000461195 KRTAP19-8Q3LI54 63 aa10.06□□□□□ -0.8
TRAF4-207ENST00000461195 MT1BP07438 61 aa10.04□□□□□ -0.8
TRAF4-207ENST00000461195 CRIPTQ9P021 101 aa10.03□□□□□ -0.8
TRAF4-207ENST00000461195 H0YAA0 97 aa10.02□□□□□ -0.81
TRAF4-207ENST00000461195 K7ERU9 68 aa9.97□□□□□ -0.81
TRAF4-207ENST00000461195 MT-ATP8P03928 68 aa9.94□□□□□ -0.82
TRAF4-207ENST00000461195 A6NN06 94 aa9.91□□□□□ -0.82
TRAF4-207ENST00000461195 ADM2Q7Z4H4 148 aa9.91□□□□□ -0.82
TRAF4-207ENST00000461195 DMAC1Q96GE9 116 aa9.9□□□□□ -0.82
TRAF4-207ENST00000461195 NEBP20929 6669 aa9.87□□□□□ -0.83
TRAF4-207ENST00000461195 SMIM20Q8N5G0 67 aa9.85□□□□□ -0.83
TRAF4-207ENST00000461195 TRAV7A0A075B6U4 112 aa9.83□□□□□ -0.84
TRAF4-207ENST00000461195 KRTAP10-5P60370 271 aa9.8□□□□□ -0.84
TRAF4-207ENST00000461195 MUC12Q9UKN1 5478 aa9.77□□□□□ -0.85
TRAF4-207ENST00000461195 C20orf197Q8N268 126 aa9.71□□□□□ -0.86
TRAF4-207ENST00000461195 ACYP2P14621 99 aa9.7□□□□□ -0.86
TRAF4-207ENST00000461195 P0C880 135 aa9.68□□□□□ -0.86
TRAF4-207ENST00000461195 R4GN34 69 aa9.66□□□□□ -0.86
TRAF4-207ENST00000461195 KRTAP20-1Q3LI63 56 aa9.64□□□□□ -0.87
TRAF4-207ENST00000461195 KRTAP3-2Q9BYR7 98 aa9.61□□□□□ -0.87
TRAF4-207ENST00000461195 SNURFQ9Y675 71 aa9.61□□□□□ -0.87
TRAF4-207ENST00000461195 M0QZ58 72 aa9.58□□□□□ -0.88
TRAF4-207ENST00000461195 SPTSSBQ8NFR3 76 aa9.58□□□□□ -0.88
TRAF4-207ENST00000461195 PLAC4Q8WY50 150 aa9.56□□□□□ -0.88
TRAF4-207ENST00000461195 SERP2Q8N6R1 65 aa9.53□□□□□ -0.88
TRAF4-207ENST00000461195 CHKB-CPT1BH3BT56 60 aa9.52□□□□□ -0.89
TRAF4-207ENST00000461195 PRO2289Q9P1D8 64 aa9.5□□□□□ -0.89
TRAF4-207ENST00000461195 SPANXA2-OT1Q8N9U9 137 aa9.48□□□□□ -0.89
TRAF4-207ENST00000461195 MDN1Q9NU22 5596 aa9.46□□□□□ -0.89
TRAF4-207ENST00000461195 KRTAP5-9P26371 169 aa9.46□□□□□ -0.9
TRAF4-207ENST00000461195 KMT2DO14686 5537 aa9.45□□□□□ -0.9
TRAF4-207ENST00000461195 MT1XP80297 61 aa9.44□□□□□ -0.9
TRAF4-207ENST00000461195 LINC01554Q52M75 96 aa9.43□□□□□ -0.9
TRAF4-207ENST00000461195 COX7CP15954 63 aa9.26□□□□□ -0.93
TRAF4-207ENST00000461195 KRTAP2-3P0C7H8 128 aa9.25□□□□□ -0.93
TRAF4-207ENST00000461195 KRTAP2-4Q9BYR9 128 aa9.25□□□□□ -0.93
TRAF4-207ENST00000461195 KRTAP12-2P59991 146 aa9.21□□□□□ -0.94
TRAF4-207ENST00000461195 COA5Q86WW8 74 aa9.21□□□□□ -0.94
TRAF4-207ENST00000461195 KRTAP8-1Q8IUC2 63 aa9.1□□□□□ -0.95
TRAF4-207ENST00000461195 SPRR2FQ96RM1 72 aa9.1□□□□□ -0.95
TRAF4-207ENST00000461195 H7BZZ5 65 aa9.09□□□□□ -0.95
TRAF4-207ENST00000461195 SPRR2EP22531 72 aa9.09□□□□□ -0.95
TRAF4-207ENST00000461195 SPRR2BP35325 72 aa9.09□□□□□ -0.95
TRAF4-207ENST00000461195 SPRR2AP35326 72 aa9.09□□□□□ -0.95
TRAF4-207ENST00000461195 KRTAP13-4Q3LI77 160 aa9.08□□□□□ -0.96
TRAF4-207ENST00000461195 CYSTM1Q9H1C7 97 aa9.08□□□□□ -0.96
TRAF4-207ENST00000461195 SEC61GP60059 68 aa9.04□□□□□ -0.96
TRAF4-207ENST00000461195 KRTAP10-7P60409 375 aaPredicted RBP9.01□□□□□ -0.97
TRAF4-207ENST00000461195 SERP1Q9Y6X1 66 aa9.01□□□□□ -0.97
TRAF4-207ENST00000461195 KRTAP4-8A0A0G2JLE6 195 aa8.99□□□□□ -0.97
TRAF4-207ENST00000461195 KRTAP4-8Q9BYQ9 185 aa8.99□□□□□ -0.97
TRAF4-207ENST00000461195 KRTAP10-12P60413 245 aa8.98□□□□□ -0.97
TRAF4-207ENST00000461195 ANAPC13Q9BS18 74 aa8.98□□□□□ -0.97
TRAF4-207ENST00000461195 KRTAP2-2Q9BYT5 123 aa8.93□□□□□ -0.98
TRAF4-207ENST00000461195 KRTAP2-1Q9BYU5 128 aa8.93□□□□□ -0.98
TRAF4-207ENST00000461195 CAMK2N1Q7Z7J9 78 aa8.9□□□□□ -0.98
TRAF4-207ENST00000461195 LCE1AQ5T7P2 110 aa8.88□□□□□ -0.99
TRAF4-207ENST00000461195 A0A1B0GU33 70 aa8.86□□□□□ -0.99
TRAF4-207ENST00000461195 A0A0D9SG42 100 aa8.83□□□□□ -1
TRAF4-207ENST00000461195 SPATA8Q6RVD6 105 aa8.83□□□□□ -1
TRAF4-207ENST00000461195 CCDC179H3BU77 68 aa8.78□□□□□ -1
TRAF4-207ENST00000461195 SPRR2DP22532 72 aa8.78□□□□□ -1
TRAF4-207ENST00000461195 A0A1B0GU69 56 aa8.75□□□□□ -1.01
TRAF4-207ENST00000461195 SPINT4Q6UDR6 99 aa8.71□□□□□ -1.02
TRAF4-207ENST00000461195 ATP5EP56381 51 aaPredicted RBP8.68□□□□□ -1.02
TRAF4-207ENST00000461195 KRTAP12-1P59990 96 aa8.65□□□□□ -1.02
TRAF4-207ENST00000461195 SMIM26A0A096LP01 95 aa8.62□□□□□ -1.03
TRAF4-207ENST00000461195 LCE3BQ5TA77 95 aa8.58□□□□□ -1.04
TRAF4-207ENST00000461195 PRR15LQ9BU68 103 aa8.53□□□□□ -1.04
TRAF4-207ENST00000461195 A8MU10 97 aa8.52□□□□□ -1.05
TRAF4-207ENST00000461195 TMEM258P61165 79 aa8.48□□□□□ -1.05
TRAF4-207ENST00000461195 LINC01558Q9Y6Z2 57 aa8.45□□□□□ -1.06
TRAF4-207ENST00000461195 KRTAP19-7Q3SYF9 63 aa8.44□□□□□ -1.06
TRAF4-207ENST00000461195 MT1EP04732 61 aa8.37□□□□□ -1.07
TRAF4-207ENST00000461195 GPR98Q8WXG9 6306 aa8.36□□□□□ -1.07
TRAF4-207ENST00000461195 LCE5AQ5TCM9 118 aa8.28□□□□□ -1.08
TRAF4-207ENST00000461195 KRTAP19-3Q7Z4W3 81 aa8.28□□□□□ -1.08
TRAF4-207ENST00000461195 KRTAP19-5Q3LI72 72 aa8.26□□□□□ -1.09
TRAF4-207ENST00000461195 C10orf95Q9H7T3 257 aa8.26□□□□□ -1.09
TRAF4-207ENST00000461195 DSTQ03001 7570 aaKnown RBP8.26□□□□□ -1.09
TRAF4-207ENST00000461195 UQCR11O14957 56 aa8.24□□□□□ -1.09
TRAF4-207ENST00000461195 TNP1P09430 55 aa8.24□□□□□ -1.09
TRAF4-207ENST00000461195 KRTAP4-9Q9BYQ8 210 aa8.15□□□□□ -1.1
TRAF4-207ENST00000461195 LCE3AQ5TA76 89 aa8.13□□□□□ -1.11
TRAF4-207ENST00000461195 MT1GP13640 62 aa8.1□□□□□ -1.11
TRAF4-207ENST00000461195 MIR22HGQ0VDD5 57 aa8.06□□□□□ -1.12
TRAF4-207ENST00000461195 PP632Q6XCG6 107 aa8.05□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 9.8 ms