RNA–Protein interactions for RNA: ENST00000460767.5

SCAMP4-206, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 4

Gene SCAMP4, Length 569 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-206ENST00000460767 KRTAP5-9P26371 169 aa6.31□□□□□ -1.4
SCAMP4-206ENST00000460767 LCA10Q71F78 164 aa6.31□□□□□ -1.4
SCAMP4-206ENST00000460767 S4R3F8 94 aa6.29□□□□□ -1.4
SCAMP4-206ENST00000460767 C5orf47Q569G3 176 aa6.25□□□□□ -1.41
SCAMP4-206ENST00000460767 A6NN06 94 aa6.24□□□□□ -1.41
SCAMP4-206ENST00000460767 CSAG1Q6PB30 78 aa6.24□□□□□ -1.41
SCAMP4-206ENST00000460767 IMUPQ9GZP8 106 aa6.24□□□□□ -1.41
SCAMP4-206ENST00000460767 KLKP1Q107X0 134 aa6.22□□□□□ -1.41
SCAMP4-206ENST00000460767 LINC00208Q96KT6 92 aa6.22□□□□□ -1.41
SCAMP4-206ENST00000460767 K7ERU9 68 aa6.2□□□□□ -1.42
SCAMP4-206ENST00000460767 KRTAP2-3P0C7H8 128 aa6.19□□□□□ -1.42
SCAMP4-206ENST00000460767 KRTAP2-4Q9BYR9 128 aa6.19□□□□□ -1.42
SCAMP4-206ENST00000460767 A8MUN3 132 aa6.18□□□□□ -1.42
SCAMP4-206ENST00000460767 H3BPC8 53 aa6.18□□□□□ -1.42
SCAMP4-206ENST00000460767 MT-ATP8P03928 68 aa6.18□□□□□ -1.42
SCAMP4-206ENST00000460767 MP68P56378 58 aa6.18□□□□□ -1.42
SCAMP4-206ENST00000460767 SPRR2GQ9BYE4 73 aa6.16□□□□□ -1.42
SCAMP4-206ENST00000460767 MT1BP07438 61 aa6.15□□□□□ -1.42
SCAMP4-206ENST00000460767 KMT2DO14686 5537 aa6.15□□□□□ -1.43
SCAMP4-206ENST00000460767 MDN1Q9NU22 5596 aa6.14□□□□□ -1.43
SCAMP4-206ENST00000460767 KRTAP10-5P60370 271 aa6.13□□□□□ -1.43
SCAMP4-206ENST00000460767 H0YAA0 97 aa6.11□□□□□ -1.43
SCAMP4-206ENST00000460767 KRTAP19-8Q3LI54 63 aa6.11□□□□□ -1.43
SCAMP4-206ENST00000460767 SCGB1A1P11684 91 aa6.1□□□□□ -1.43
SCAMP4-206ENST00000460767 Q5VV11 94 aa6.09□□□□□ -1.43
SCAMP4-206ENST00000460767 DMAC1Q96GE9 116 aa6.08□□□□□ -1.44
SCAMP4-206ENST00000460767 FAM236AA0A1B0GUQ0 79 aa6.07□□□□□ -1.44
SCAMP4-206ENST00000460767 FAM236BA0A1B0GV22 79 aa6.07□□□□□ -1.44
SCAMP4-206ENST00000460767 TRAV7A0A075B6U4 112 aa6.06□□□□□ -1.44
SCAMP4-206ENST00000460767 NDUFC1O43677 76 aa6.06□□□□□ -1.44
SCAMP4-206ENST00000460767 SMIM20Q8N5G0 67 aa6.05□□□□□ -1.44
SCAMP4-206ENST00000460767 CRIPTQ9P021 101 aa6.03□□□□□ -1.44
SCAMP4-206ENST00000460767 KRTAP2-2Q9BYT5 123 aa5.96□□□□□ -1.46
SCAMP4-206ENST00000460767 KRTAP2-1Q9BYU5 128 aa5.96□□□□□ -1.46
SCAMP4-206ENST00000460767 SPRR2EP22531 72 aa5.93□□□□□ -1.46
SCAMP4-206ENST00000460767 SPRR2BP35325 72 aa5.93□□□□□ -1.46
SCAMP4-206ENST00000460767 SPRR2AP35326 72 aa5.93□□□□□ -1.46
SCAMP4-206ENST00000460767 ADM2Q7Z4H4 148 aa5.93□□□□□ -1.46
SCAMP4-206ENST00000460767 KRTAP3-2Q9BYR7 98 aa5.93□□□□□ -1.46
SCAMP4-206ENST00000460767 SERP2Q8N6R1 65 aa5.91□□□□□ -1.46
SCAMP4-206ENST00000460767 SPRR2FQ96RM1 72 aa5.89□□□□□ -1.47
SCAMP4-206ENST00000460767 SNURFQ9Y675 71 aa5.89□□□□□ -1.47
SCAMP4-206ENST00000460767 P0C880 135 aa5.88□□□□□ -1.47
SCAMP4-206ENST00000460767 ACYP2P14621 99 aa5.87□□□□□ -1.47
SCAMP4-206ENST00000460767 SPANXA2-OT1Q8N9U9 137 aa5.87□□□□□ -1.47
SCAMP4-206ENST00000460767 C20orf197Q8N268 126 aa5.84□□□□□ -1.47
SCAMP4-206ENST00000460767 LCE1AQ5T7P2 110 aa5.83□□□□□ -1.48
SCAMP4-206ENST00000460767 COX7CP15954 63 aa5.76□□□□□ -1.49
SCAMP4-206ENST00000460767 R4GN34 69 aa5.75□□□□□ -1.49
SCAMP4-206ENST00000460767 SPRR2DP22532 72 aa5.74□□□□□ -1.49
SCAMP4-206ENST00000460767 MT1XP80297 61 aa5.73□□□□□ -1.49
SCAMP4-206ENST00000460767 KRTAP8-1Q8IUC2 63 aa5.73□□□□□ -1.49
SCAMP4-206ENST00000460767 SPTSSBQ8NFR3 76 aa5.72□□□□□ -1.49
SCAMP4-206ENST00000460767 M0QZ58 72 aa5.71□□□□□ -1.5
SCAMP4-206ENST00000460767 CYSTM1Q9H1C7 97 aa5.71□□□□□ -1.5
SCAMP4-206ENST00000460767 H7BZZ5 65 aa5.7□□□□□ -1.5
SCAMP4-206ENST00000460767 PRO2289Q9P1D8 64 aa5.69□□□□□ -1.5
SCAMP4-206ENST00000460767 CHKB-CPT1BH3BT56 60 aa5.68□□□□□ -1.5
SCAMP4-206ENST00000460767 KRTAP12-2P59991 146 aa5.67□□□□□ -1.5
SCAMP4-206ENST00000460767 LCE3BQ5TA77 95 aa5.64□□□□□ -1.51
SCAMP4-206ENST00000460767 COA5Q86WW8 74 aa5.64□□□□□ -1.51
SCAMP4-206ENST00000460767 PLAC4Q8WY50 150 aa5.63□□□□□ -1.51
SCAMP4-206ENST00000460767 GPR98Q8WXG9 6306 aa5.62□□□□□ -1.51
SCAMP4-206ENST00000460767 KRTAP13-4Q3LI77 160 aa5.58□□□□□ -1.52
SCAMP4-206ENST00000460767 LINC01554Q52M75 96 aa5.56□□□□□ -1.52
SCAMP4-206ENST00000460767 ANAPC13Q9BS18 74 aa5.55□□□□□ -1.52
SCAMP4-206ENST00000460767 KRTAP4-8A0A0G2JLE6 195 aa5.5□□□□□ -1.53
SCAMP4-206ENST00000460767 CCDC179H3BU77 68 aa5.5□□□□□ -1.53
SCAMP4-206ENST00000460767 KRTAP4-8Q9BYQ9 185 aa5.5□□□□□ -1.53
SCAMP4-206ENST00000460767 KRTAP10-12P60413 245 aa5.46□□□□□ -1.54
SCAMP4-206ENST00000460767 KRTAP10-7P60409 375 aaPredicted RBP5.44□□□□□ -1.54
SCAMP4-206ENST00000460767 SERP1Q9Y6X1 66 aa5.39□□□□□ -1.55
SCAMP4-206ENST00000460767 DSTQ03001 7570 aaKnown RBP5.38□□□□□ -1.55
SCAMP4-206ENST00000460767 ATP5EP56381 51 aaPredicted RBP5.38□□□□□ -1.55
SCAMP4-206ENST00000460767 SEC61GP60059 68 aa5.38□□□□□ -1.55
SCAMP4-206ENST00000460767 A0A1B0GU33 70 aa5.37□□□□□ -1.55
SCAMP4-206ENST00000460767 SPATA8Q6RVD6 105 aa5.35□□□□□ -1.55
SCAMP4-206ENST00000460767 KRTAP4-9Q9BYQ8 210 aa5.32□□□□□ -1.56
SCAMP4-206ENST00000460767 KRTAP12-1P59990 96 aa5.31□□□□□ -1.56
SCAMP4-206ENST00000460767 TMEM258P61165 79 aa5.3□□□□□ -1.56
SCAMP4-206ENST00000460767 A0A1B0GU69 56 aa5.29□□□□□ -1.56
SCAMP4-206ENST00000460767 A0A0D9SG42 100 aa5.27□□□□□ -1.57
SCAMP4-206ENST00000460767 CAMK2N1Q7Z7J9 78 aa5.26□□□□□ -1.57
SCAMP4-206ENST00000460767 LINC01558Q9Y6Z2 57 aa5.24□□□□□ -1.57
SCAMP4-206ENST00000460767 LCE5AQ5TCM9 118 aa5.21□□□□□ -1.58
SCAMP4-206ENST00000460767 LCE1DQ5T752 114 aa5.2□□□□□ -1.58
SCAMP4-206ENST00000460767 SMIM26A0A096LP01 95 aa5.19□□□□□ -1.58
SCAMP4-206ENST00000460767 A8MU10 97 aa5.19□□□□□ -1.58
SCAMP4-206ENST00000460767 SPINT4Q6UDR6 99 aa5.17□□□□□ -1.58
SCAMP4-206ENST00000460767 KRTAP19-7Q3SYF9 63 aa5.15□□□□□ -1.59
SCAMP4-206ENST00000460767 PRR15LQ9BU68 103 aa5.14□□□□□ -1.59
SCAMP4-206ENST00000460767 KRTAP5-10Q6L8G5 202 aa5.12□□□□□ -1.59
SCAMP4-206ENST00000460767 LCE4AQ5TA78 99 aa5.11□□□□□ -1.59
SCAMP4-206ENST00000460767 KRTAP19-3Q7Z4W3 81 aa5.1□□□□□ -1.59
SCAMP4-206ENST00000460767 HMCN1Q96RW7 5635 aa5.09□□□□□ -1.6
SCAMP4-206ENST00000460767 MT1EP04732 61 aa5.06□□□□□ -1.6
SCAMP4-206ENST00000460767 C10orf95Q9H7T3 257 aa5.06□□□□□ -1.6
SCAMP4-206ENST00000460767 PCP4P48539 62 aa5.04□□□□□ -1.6
SCAMP4-206ENST00000460767 AHNAK2Q8IVF2 5795 aa5.03□□□□□ -1.6
SCAMP4-206ENST00000460767 UQCR11O14957 56 aa5.03□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 68.2 ms