RNA–Protein interactions for RNA: ENST00000460264.5

COL5A1-203, Transcript of collagen type V alpha 1 chain, humanhuman

TSL 3

Gene COL5A1, Length 913 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-203ENST00000460264 Q5VV11 94 aa8.48□□□□□ -1.05
COL5A1-203ENST00000460264 H0Y9P7 68 aa8.46□□□□□ -1.06
COL5A1-203ENST00000460264 ATOX1O00244 68 aa8.45□□□□□ -1.06
COL5A1-203ENST00000460264 LINC00643Q86TS7 51 aa8.42□□□□□ -1.06
COL5A1-203ENST00000460264 KRTAP6-3Q3LI67 103 aa8.41□□□□□ -1.06
COL5A1-203ENST00000460264 A6NN06 94 aa8.4□□□□□ -1.06
COL5A1-203ENST00000460264 CRIPTQ9P021 101 aa8.35□□□□□ -1.07
COL5A1-203ENST00000460264 NDUFC1O43677 76 aa8.34□□□□□ -1.07
COL5A1-203ENST00000460264 IMUPQ9GZP8 106 aa8.34□□□□□ -1.07
COL5A1-203ENST00000460264 A0A1B0GV90 55 aa8.32□□□□□ -1.08
COL5A1-203ENST00000460264 A8MUN3 132 aa8.32□□□□□ -1.08
COL5A1-203ENST00000460264 LINC00208Q96KT6 92 aa8.32□□□□□ -1.08
COL5A1-203ENST00000460264 KRTAP10-5P60370 271 aa8.31□□□□□ -1.08
COL5A1-203ENST00000460264 H0YAA0 97 aa8.3□□□□□ -1.08
COL5A1-203ENST00000460264 OCR1Q9BZK8 76 aa8.3□□□□□ -1.08
COL5A1-203ENST00000460264 MP68P56378 58 aa8.26□□□□□ -1.09
COL5A1-203ENST00000460264 ADM2Q7Z4H4 148 aa8.2□□□□□ -1.1
COL5A1-203ENST00000460264 J3QR89 54 aa8.15□□□□□ -1.1
COL5A1-203ENST00000460264 H3BPC8 53 aa8.14□□□□□ -1.11
COL5A1-203ENST00000460264 DMAC1Q96GE9 116 aa8.08□□□□□ -1.12
COL5A1-203ENST00000460264 SCGB1A1P11684 91 aa8.07□□□□□ -1.12
COL5A1-203ENST00000460264 NEBP20929 6669 aa8.07□□□□□ -1.12
COL5A1-203ENST00000460264 KRTAP5-9P26371 169 aa8.03□□□□□ -1.12
COL5A1-203ENST00000460264 P0C880 135 aa8.02□□□□□ -1.13
COL5A1-203ENST00000460264 MUC12Q9UKN1 5478 aa8.01□□□□□ -1.13
COL5A1-203ENST00000460264 C20orf197Q8N268 126 aa7.99□□□□□ -1.13
COL5A1-203ENST00000460264 R4GN34 69 aa7.99□□□□□ -1.13
COL5A1-203ENST00000460264 MT1XP80297 61 aa7.97□□□□□ -1.13
COL5A1-203ENST00000460264 PRO2289Q9P1D8 64 aa7.97□□□□□ -1.13
COL5A1-203ENST00000460264 PLAC4Q8WY50 150 aa7.95□□□□□ -1.14
COL5A1-203ENST00000460264 KRTAP3-2Q9BYR7 98 aa7.94□□□□□ -1.14
COL5A1-203ENST00000460264 M0QZ58 72 aa7.93□□□□□ -1.14
COL5A1-203ENST00000460264 KMT2DO14686 5537 aa7.91□□□□□ -1.14
COL5A1-203ENST00000460264 TRAV7A0A075B6U4 112 aa7.9□□□□□ -1.14
COL5A1-203ENST00000460264 MT-ATP8P03928 68 aa7.9□□□□□ -1.14
COL5A1-203ENST00000460264 SMIM20Q8N5G0 67 aa7.85□□□□□ -1.15
COL5A1-203ENST00000460264 ACYP2P14621 99 aa7.84□□□□□ -1.15
COL5A1-203ENST00000460264 MDN1Q9NU22 5596 aa7.82□□□□□ -1.16
COL5A1-203ENST00000460264 K7ERU9 68 aa7.82□□□□□ -1.16
COL5A1-203ENST00000460264 KRTAP20-1Q3LI63 56 aa7.81□□□□□ -1.16
COL5A1-203ENST00000460264 LINC01554Q52M75 96 aa7.81□□□□□ -1.16
COL5A1-203ENST00000460264 KRTAP12-2P59991 146 aa7.78□□□□□ -1.16
COL5A1-203ENST00000460264 SPRR2FQ96RM1 72 aa7.77□□□□□ -1.17
COL5A1-203ENST00000460264 SPTSSBQ8NFR3 76 aa7.76□□□□□ -1.17
COL5A1-203ENST00000460264 KRTAP8-1Q8IUC2 63 aa7.73□□□□□ -1.17
COL5A1-203ENST00000460264 SNURFQ9Y675 71 aa7.71□□□□□ -1.18
COL5A1-203ENST00000460264 CHKB-CPT1BH3BT56 60 aa7.7□□□□□ -1.18
COL5A1-203ENST00000460264 SPRR2EP22531 72 aa7.67□□□□□ -1.18
COL5A1-203ENST00000460264 SPRR2BP35325 72 aa7.67□□□□□ -1.18
COL5A1-203ENST00000460264 SPRR2AP35326 72 aa7.67□□□□□ -1.18
COL5A1-203ENST00000460264 KRTAP4-8A0A0G2JLE6 195 aa7.62□□□□□ -1.19
COL5A1-203ENST00000460264 SPANXA2-OT1Q8N9U9 137 aa7.62□□□□□ -1.19
COL5A1-203ENST00000460264 KRTAP4-8Q9BYQ9 185 aa7.62□□□□□ -1.19
COL5A1-203ENST00000460264 KRTAP10-7P60409 375 aaPredicted RBP7.6□□□□□ -1.19
COL5A1-203ENST00000460264 KRTAP2-3P0C7H8 128 aa7.58□□□□□ -1.2
COL5A1-203ENST00000460264 KRTAP2-4Q9BYR9 128 aa7.58□□□□□ -1.2
COL5A1-203ENST00000460264 LCE1AQ5T7P2 110 aa7.57□□□□□ -1.2
COL5A1-203ENST00000460264 SERP2Q8N6R1 65 aa7.57□□□□□ -1.2
COL5A1-203ENST00000460264 KRTAP10-12P60413 245 aa7.55□□□□□ -1.2
COL5A1-203ENST00000460264 KRTAP13-4Q3LI77 160 aa7.48□□□□□ -1.21
COL5A1-203ENST00000460264 SPRR2DP22532 72 aa7.41□□□□□ -1.22
COL5A1-203ENST00000460264 COA5Q86WW8 74 aa7.41□□□□□ -1.22
COL5A1-203ENST00000460264 CAMK2N1Q7Z7J9 78 aa7.34□□□□□ -1.23
COL5A1-203ENST00000460264 KRTAP2-2Q9BYT5 123 aa7.34□□□□□ -1.23
COL5A1-203ENST00000460264 KRTAP2-1Q9BYU5 128 aa7.34□□□□□ -1.23
COL5A1-203ENST00000460264 COX7CP15954 63 aa7.31□□□□□ -1.24
COL5A1-203ENST00000460264 SEC61GP60059 68 aa7.27□□□□□ -1.25
COL5A1-203ENST00000460264 SERP1Q9Y6X1 66 aa7.26□□□□□ -1.25
COL5A1-203ENST00000460264 CYSTM1Q9H1C7 97 aa7.25□□□□□ -1.25
COL5A1-203ENST00000460264 H7BZZ5 65 aa7.24□□□□□ -1.25
COL5A1-203ENST00000460264 A0A0D9SG42 100 aa7.23□□□□□ -1.25
COL5A1-203ENST00000460264 LCE3BQ5TA77 95 aa7.21□□□□□ -1.26
COL5A1-203ENST00000460264 SPATA8Q6RVD6 105 aa7.2□□□□□ -1.26
COL5A1-203ENST00000460264 A0A1B0GU33 70 aa7.17□□□□□ -1.26
COL5A1-203ENST00000460264 KRTAP19-7Q3SYF9 63 aa7.12□□□□□ -1.27
COL5A1-203ENST00000460264 SPINT4Q6UDR6 99 aa7.11□□□□□ -1.27
COL5A1-203ENST00000460264 KRTAP12-1P59990 96 aa7.1□□□□□ -1.27
COL5A1-203ENST00000460264 MT1EP04732 61 aa7.06□□□□□ -1.28
COL5A1-203ENST00000460264 LCE5AQ5TCM9 118 aa7.04□□□□□ -1.28
COL5A1-203ENST00000460264 A0A1B0GU69 56 aa7.02□□□□□ -1.29
COL5A1-203ENST00000460264 ANAPC13Q9BS18 74 aa7.02□□□□□ -1.29
COL5A1-203ENST00000460264 KRTAP19-3Q7Z4W3 81 aa7□□□□□ -1.29
COL5A1-203ENST00000460264 SMIM26A0A096LP01 95 aa6.96□□□□□ -1.3
COL5A1-203ENST00000460264 A8MU10 97 aa6.93□□□□□ -1.3
COL5A1-203ENST00000460264 KRTAP19-5Q3LI72 72 aa6.92□□□□□ -1.3
COL5A1-203ENST00000460264 DSTQ03001 7570 aaKnown RBP6.9□□□□□ -1.31
COL5A1-203ENST00000460264 CCDC179H3BU77 68 aa6.89□□□□□ -1.31
COL5A1-203ENST00000460264 ATP5EP56381 51 aaPredicted RBP6.83□□□□□ -1.32
COL5A1-203ENST00000460264 MT1GP13640 62 aa6.82□□□□□ -1.32
COL5A1-203ENST00000460264 PRR15LQ9BU68 103 aa6.79□□□□□ -1.32
COL5A1-203ENST00000460264 C10orf95Q9H7T3 257 aa6.79□□□□□ -1.32
COL5A1-203ENST00000460264 PP632Q6XCG6 107 aa6.77□□□□□ -1.33
COL5A1-203ENST00000460264 TNP1P09430 55 aa6.75□□□□□ -1.33
COL5A1-203ENST00000460264 LCE3AQ5TA76 89 aa6.75□□□□□ -1.33
COL5A1-203ENST00000460264 MT1LQ93083 61 aa6.74□□□□□ -1.33
COL5A1-203ENST00000460264 MT1MQ8N339 61 aa6.73□□□□□ -1.33
COL5A1-203ENST00000460264 LINC01558Q9Y6Z2 57 aa6.72□□□□□ -1.33
COL5A1-203ENST00000460264 KRTAP4-9Q9BYQ8 210 aa6.71□□□□□ -1.34
COL5A1-203ENST00000460264 TMEM258P61165 79 aa6.62□□□□□ -1.35
COL5A1-203ENST00000460264 LCE1DQ5T752 114 aa6.58□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 141.7 ms