RNA–Protein interactions for RNA: ENST00000460064.1

CCDC50-203, Transcript of coiled-coil domain containing 50, humanhuman

TSL 2

Gene CCDC50, Length 420 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50-203ENST00000460064 WNK1Q9H4A3 2382 aa1.04□□□□□ -2.24
CCDC50-203ENST00000460064 SVEP1Q4LDE5 3571 aa1.03□□□□□ -2.24
CCDC50-203ENST00000460064 KNL1Q8NG31 2342 aa1.03□□□□□ -2.24
CCDC50-203ENST00000460064 PRLHP81277 87 aa1.03□□□□□ -2.24
CCDC50-203ENST00000460064 DEFB133Q30KQ1 61 aa1.03□□□□□ -2.24
CCDC50-203ENST00000460064 MAP1AP78559 2803 aaPredicted RBP1.03□□□□□ -2.24
CCDC50-203ENST00000460064 ZANQ9Y493 2812 aa1.03□□□□□ -2.24
CCDC50-203ENST00000460064 TACC2O95359 2948 aa1.03□□□□□ -2.24
CCDC50-203ENST00000460064 EPPK1P58107 5090 aaKnown RBP1.03□□□□□ -2.24
CCDC50-203ENST00000460064 TRRAPQ9Y4A5 3859 aa1.02□□□□□ -2.25
CCDC50-203ENST00000460064 MMP24-AS1A0A0U1RRL7 71 aa1.02□□□□□ -2.25
CCDC50-203ENST00000460064 H3BUA1 57 aa1.02□□□□□ -2.25
CCDC50-203ENST00000460064 PCLOQ9Y6V0 5065 aa1.02□□□□□ -2.25
CCDC50-203ENST00000460064 HYDINQ4G0P3 5121 aa1.02□□□□□ -2.25
CCDC50-203ENST00000460064 UBR4Q5T4S7 5183 aa1.02□□□□□ -2.25
CCDC50-203ENST00000460064 STATHP02808 62 aa1.01□□□□□ -2.25
CCDC50-203ENST00000460064 DEFB106AQ8N104 65 aa1.01□□□□□ -2.25
CCDC50-203ENST00000460064 AHNAK2Q8IVF2 5795 aa1.01□□□□□ -2.25
CCDC50-203ENST00000460064 KRTAP19-3Q7Z4W3 81 aa1□□□□□ -2.25
CCDC50-203ENST00000460064 PRKDCP78527 4128 aaKnown RBP1□□□□□ -2.25
CCDC50-203ENST00000460064 HERC2O95714 4834 aa0.99□□□□□ -2.25
CCDC50-203ENST00000460064 POLR2KP53803 58 aaKnown RBP0.99□□□□□ -2.25
CCDC50-203ENST00000460064 DEFB131AP59861 70 aa0.99□□□□□ -2.25
CCDC50-203ENST00000460064 SONP18583 2426 aaKnown RBP0.99□□□□□ -2.25
CCDC50-203ENST00000460064 TENM3Q9P273 2699 aa0.99□□□□□ -2.25
CCDC50-203ENST00000460064 RYR1P21817 5038 aa0.98□□□□□ -2.25
CCDC50-203ENST00000460064 RYR2Q92736 4967 aa0.98□□□□□ -2.25
CCDC50-203ENST00000460064 MUC16Q8WXI7 14507 aa0.98□□□□□ -2.25
CCDC50-203ENST00000460064 RPL39P62891 51 aaKnown RBP0.98□□□□□ -2.25
CCDC50-203ENST00000460064 KRTAP5-10Q6L8G5 202 aa0.98□□□□□ -2.25
CCDC50-203ENST00000460064 TENM2Q9NT68 2774 aa0.98□□□□□ -2.25
CCDC50-203ENST00000460064 CSMD3Q7Z407 3707 aa0.95□□□□□ -2.26
CCDC50-203ENST00000460064 COL7A1Q02388 2944 aa0.95□□□□□ -2.26
CCDC50-203ENST00000460064 AKAP6Q13023 2319 aa0.94□□□□□ -2.26
CCDC50-203ENST00000460064 DNAH1Q9P2D7 4330 aa0.94□□□□□ -2.26
CCDC50-203ENST00000460064 ANK3Q12955 4377 aaKnown RBP0.94□□□□□ -2.26
CCDC50-203ENST00000460064 HECTD4Q9Y4D8 3996 aa0.94□□□□□ -2.26
CCDC50-203ENST00000460064 KIAA1109Q2LD37 5005 aa0.93□□□□□ -2.26
CCDC50-203ENST00000460064 LYSTQ99698 3801 aa0.93□□□□□ -2.26
CCDC50-203ENST00000460064 KRTAP2-3P0C7H8 128 aa0.93□□□□□ -2.26
CCDC50-203ENST00000460064 RPL39LQ96EH5 51 aaKnown RBP0.93□□□□□ -2.26
CCDC50-203ENST00000460064 ARHGAP5-AS1Q96IT6 56 aa0.93□□□□□ -2.26
CCDC50-203ENST00000460064 KRTAP2-4Q9BYR9 128 aa0.93□□□□□ -2.26
CCDC50-203ENST00000460064 KRTAP2-1Q9BYU5 128 aa0.93□□□□□ -2.26
CCDC50-203ENST00000460064 HERC1Q15751 4861 aa0.92□□□□□ -2.26
CCDC50-203ENST00000460064 DEFB108AA8MXU0 73 aa0.92□□□□□ -2.26
CCDC50-203ENST00000460064 DYNC2H1Q8NCM8 4307 aaKnown RBP0.92□□□□□ -2.26
CCDC50-203ENST00000460064 FRAS1Q86XX4 4008 aa0.92□□□□□ -2.26
CCDC50-203ENST00000460064 CMYA5Q8N3K9 4069 aa0.91□□□□□ -2.26
CCDC50-203ENST00000460064 STAB2Q8WWQ8 2551 aa0.91□□□□□ -2.26
CCDC50-203ENST00000460064 SPINK6Q6UWN8 80 aa0.91□□□□□ -2.26
CCDC50-203ENST00000460064 SACSQ9NZJ4 4579 aa0.9□□□□□ -2.27
CCDC50-203ENST00000460064 SPINK1P00995 79 aa0.9□□□□□ -2.27
CCDC50-203ENST00000460064 CLPSL2Q6UWE3 100 aa0.9□□□□□ -2.27
CCDC50-203ENST00000460064 NOP10Q9NPE3 64 aaKnown RBP0.9□□□□□ -2.27
CCDC50-203ENST00000460064 MUC2Q02817 5179 aa0.89□□□□□ -2.27
CCDC50-203ENST00000460064 DEFB135Q30KP9 77 aa0.89□□□□□ -2.27
CCDC50-203ENST00000460064 LEAP2Q969E1 77 aa0.89□□□□□ -2.27
CCDC50-203ENST00000460064 DMBT1Q9UGM3 2413 aaPredicted RBP0.88□□□□□ -2.27
CCDC50-203ENST00000460064 ABCA13Q86UQ4 5058 aa0.88□□□□□ -2.27
CCDC50-203ENST00000460064 HRNRQ86YZ3 2850 aaPredicted RBP0.87□□□□□ -2.27
CCDC50-203ENST00000460064 M0R2T5 61 aa0.87□□□□□ -2.27
CCDC50-203ENST00000460064 A8MTW9 85 aa0.86□□□□□ -2.27
CCDC50-203ENST00000460064 DEFB110Q30KQ9 67 aa0.86□□□□□ -2.27
CCDC50-203ENST00000460064 TTTY10Q9BZA0 68 aa0.85□□□□□ -2.27
CCDC50-203ENST00000460064 FAT2Q9NYQ8 4349 aa0.85□□□□□ -2.27
CCDC50-203ENST00000460064 KMT2AQ03164 3969 aa0.85□□□□□ -2.27
CCDC50-203ENST00000460064 DNAH7Q8WXX0 4024 aa0.85□□□□□ -2.27
CCDC50-203ENST00000460064 PKHD1P08F94 4074 aa0.84□□□□□ -2.27
CCDC50-203ENST00000460064 H0YGG7 62 aa0.84□□□□□ -2.27
CCDC50-203ENST00000460064 M0QY20 66 aa0.84□□□□□ -2.27
CCDC50-203ENST00000460064 KRTAP20-1Q3LI63 56 aa0.84□□□□□ -2.27
CCDC50-203ENST00000460064 DEFB104AQ8WTQ1 72 aa0.84□□□□□ -2.27
CCDC50-203ENST00000460064 COX14Q96I36 57 aa0.84□□□□□ -2.27
CCDC50-203ENST00000460064 DNAH9Q9NYC9 4486 aa0.83□□□□□ -2.28
CCDC50-203ENST00000460064 PRM1P04553 51 aa0.83□□□□□ -2.28
CCDC50-203ENST00000460064 TNXBP22105 4242 aa0.83□□□□□ -2.28
CCDC50-203ENST00000460064 STARD9Q9P2P6 4700 aa0.83□□□□□ -2.28
CCDC50-203ENST00000460064 HSPG2P98160 4391 aa0.82□□□□□ -2.28
CCDC50-203ENST00000460064 SMR3BP02814 79 aaPredicted RBP0.82□□□□□ -2.28
CCDC50-203ENST00000460064 LINC01590Q5TEZ4 76 aa0.82□□□□□ -2.28
CCDC50-203ENST00000460064 DEFB108BQ8NET1 73 aa0.82□□□□□ -2.28
CCDC50-203ENST00000460064 DNAH3Q8TD57 4116 aa0.82□□□□□ -2.28
CCDC50-203ENST00000460064 SRRM2Q9UQ35 2752 aaKnown RBP0.82□□□□□ -2.28
CCDC50-203ENST00000460064 HUWE1Q7Z6Z7 4374 aaKnown RBP0.82□□□□□ -2.28
CCDC50-203ENST00000460064 MYCBP2O75592 4640 aa0.81□□□□□ -2.28
CCDC50-203ENST00000460064 DNAH11Q96DT5 4516 aa0.81□□□□□ -2.28
CCDC50-203ENST00000460064 FAT4Q6V0I7 4981 aa0.81□□□□□ -2.28
CCDC50-203ENST00000460064 DNAH10Q8IVF4 4471 aa0.79□□□□□ -2.28
CCDC50-203ENST00000460064 TOMM7Q9P0U1 55 aa0.79□□□□□ -2.28
CCDC50-203ENST00000460064 VPS13DQ5THJ4 4388 aa0.79□□□□□ -2.28
CCDC50-203ENST00000460064 HMCN2Q8NDA2 5059 aa0.79□□□□□ -2.28
CCDC50-203ENST00000460064 FSIP2Q5CZC0 6907 aa0.79□□□□□ -2.28
CCDC50-203ENST00000460064 RNF213Q63HN8 5207 aa0.78□□□□□ -2.28
CCDC50-203ENST00000460064 H3BSH0 61 aa0.78□□□□□ -2.28
CCDC50-203ENST00000460064 VPS13BQ7Z7G8 4022 aa0.78□□□□□ -2.29
CCDC50-203ENST00000460064 APOBP04114 4563 aaKnown RBP0.77□□□□□ -2.29
CCDC50-203ENST00000460064 H3BUX3 64 aa0.77□□□□□ -2.29
CCDC50-203ENST00000460064 PLECQ15149 4684 aaKnown RBP0.77□□□□□ -2.29
CCDC50-203ENST00000460064 LRP2P98164 4655 aa0.76□□□□□ -2.29
Retrieved 100 of 20,778 RNA–protein pairs in 668 ms