RNA–Protein interactions for RNA: ENST00000460035.1

CCDC12-204, Transcript of coiled-coil domain containing 12, humanhuman

TSL 2

Gene CCDC12, Length 572 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC12-204ENST00000460035 MT1FP04733 61 aa5.15□□□□□ -1.59
CCDC12-204ENST00000460035 SERP2Q8N6R1 65 aa5.13□□□□□ -1.59
CCDC12-204ENST00000460035 SNURFQ9Y675 71 aa5.12□□□□□ -1.59
CCDC12-204ENST00000460035 NDUFC1O43677 76 aa5.11□□□□□ -1.59
CCDC12-204ENST00000460035 C20orf197Q8N268 126 aa5.09□□□□□ -1.59
CCDC12-204ENST00000460035 DMAC1Q96GE9 116 aa5.08□□□□□ -1.6
CCDC12-204ENST00000460035 KRTAP9-3Q9BYQ3 159 aa5.07□□□□□ -1.6
CCDC12-204ENST00000460035 FSIP2Q5CZC0 6907 aa5.06□□□□□ -1.6
CCDC12-204ENST00000460035 COX7CP15954 63 aa5.04□□□□□ -1.6
CCDC12-204ENST00000460035 ACYP2P14621 99 aa5.03□□□□□ -1.6
CCDC12-204ENST00000460035 ANAPC13Q9BS18 74 aa5□□□□□ -1.61
CCDC12-204ENST00000460035 CRCT1Q9UGL9 99 aa5□□□□□ -1.61
CCDC12-204ENST00000460035 KRTAP9-6A0A140TA67 174 aa4.99□□□□□ -1.61
CCDC12-204ENST00000460035 SPANXA2-OT1Q8N9U9 137 aa4.99□□□□□ -1.61
CCDC12-204ENST00000460035 H0YAA0 97 aa4.97□□□□□ -1.61
CCDC12-204ENST00000460035 CHKB-CPT1BH3BT56 60 aa4.97□□□□□ -1.61
CCDC12-204ENST00000460035 USH2AO75445 5202 aa4.96□□□□□ -1.61
CCDC12-204ENST00000460035 ADM2Q7Z4H4 148 aa4.95□□□□□ -1.62
CCDC12-204ENST00000460035 SPTSSBQ8NFR3 76 aa4.93□□□□□ -1.62
CCDC12-204ENST00000460035 KRTAP19-1Q8IUB9 90 aa4.92□□□□□ -1.62
CCDC12-204ENST00000460035 SPRR2GQ9BYE4 73 aa4.9□□□□□ -1.63
CCDC12-204ENST00000460035 CYSTM1Q9H1C7 97 aa4.9□□□□□ -1.63
CCDC12-204ENST00000460035 CRIPTQ9P021 101 aa4.9□□□□□ -1.63
CCDC12-204ENST00000460035 H7BZZ5 65 aa4.89□□□□□ -1.63
CCDC12-204ENST00000460035 SSPOA2VEC9 5147 aa4.89□□□□□ -1.63
CCDC12-204ENST00000460035 CCDC179H3BU77 68 aa4.88□□□□□ -1.63
CCDC12-204ENST00000460035 H3BS24 57 aa4.86□□□□□ -1.63
CCDC12-204ENST00000460035 P0C880 135 aa4.85□□□□□ -1.63
CCDC12-204ENST00000460035 COA5Q86WW8 74 aa4.85□□□□□ -1.63
CCDC12-204ENST00000460035 KRTAP19-8Q3LI54 63 aa4.84□□□□□ -1.63
CCDC12-204ENST00000460035 Q5VV11 94 aa4.82□□□□□ -1.64
CCDC12-204ENST00000460035 KRTAP19-6Q3LI70 58 aa4.8□□□□□ -1.64
CCDC12-204ENST00000460035 R4GN34 69 aa4.8□□□□□ -1.64
CCDC12-204ENST00000460035 MT1BP07438 61 aa4.79□□□□□ -1.64
CCDC12-204ENST00000460035 M0QZ58 72 aa4.78□□□□□ -1.64
CCDC12-204ENST00000460035 FCGBPQ9Y6R7 5405 aaPredicted RBP4.75□□□□□ -1.65
CCDC12-204ENST00000460035 ATP5EP56381 51 aaPredicted RBP4.74□□□□□ -1.65
CCDC12-204ENST00000460035 LINC01554Q52M75 96 aa4.73□□□□□ -1.65
CCDC12-204ENST00000460035 SEC61GP60059 68 aa4.72□□□□□ -1.65
CCDC12-204ENST00000460035 SERP1Q9Y6X1 66 aa4.71□□□□□ -1.66
CCDC12-204ENST00000460035 PLAC4Q8WY50 150 aa4.69□□□□□ -1.66
CCDC12-204ENST00000460035 A6NN06 94 aa4.68□□□□□ -1.66
CCDC12-204ENST00000460035 TMEM258P61165 79 aa4.68□□□□□ -1.66
CCDC12-204ENST00000460035 KRTAP10-5P60370 271 aa4.64□□□□□ -1.67
CCDC12-204ENST00000460035 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.63□□□□□ -1.67
CCDC12-204ENST00000460035 A0A1B0GU69 56 aa4.62□□□□□ -1.67
CCDC12-204ENST00000460035 A0A1B0GU33 70 aa4.6□□□□□ -1.67
CCDC12-204ENST00000460035 KRTAP13-4Q3LI77 160 aa4.6□□□□□ -1.67
CCDC12-204ENST00000460035 PRO2289Q9P1D8 64 aa4.57□□□□□ -1.68
CCDC12-204ENST00000460035 MACF1Q9UPN3 7388 aaKnown RBP4.56□□□□□ -1.68
CCDC12-204ENST00000460035 SPATA8Q6RVD6 105 aa4.56□□□□□ -1.68
CCDC12-204ENST00000460035 MT1XP80297 61 aa4.55□□□□□ -1.68
CCDC12-204ENST00000460035 PRR15LQ9BU68 103 aa4.55□□□□□ -1.68
CCDC12-204ENST00000460035 A0A0D9SG42 100 aa4.54□□□□□ -1.68
CCDC12-204ENST00000460035 PCP4P48539 62 aa4.54□□□□□ -1.68
CCDC12-204ENST00000460035 SYNE2Q8WXH0 6885 aaKnown RBP4.54□□□□□ -1.68
CCDC12-204ENST00000460035 LINC01558Q9Y6Z2 57 aa4.53□□□□□ -1.68
CCDC12-204ENST00000460035 KRTAP9-7A8MTY7 169 aa4.52□□□□□ -1.69
CCDC12-204ENST00000460035 SMIM26A0A096LP01 95 aa4.47□□□□□ -1.69
CCDC12-204ENST00000460035 SPINT4Q6UDR6 99 aa4.47□□□□□ -1.69
CCDC12-204ENST00000460035 CAMK2N1Q7Z7J9 78 aa4.47□□□□□ -1.69
CCDC12-204ENST00000460035 A8MU10 97 aa4.43□□□□□ -1.7
CCDC12-204ENST00000460035 SVIPQ8NHG7 77 aa4.43□□□□□ -1.7
CCDC12-204ENST00000460035 V9GYY9 64 aa4.42□□□□□ -1.7
CCDC12-204ENST00000460035 KRTAP12-2P59991 146 aa4.41□□□□□ -1.7
CCDC12-204ENST00000460035 KRTAP6-3Q3LI67 103 aa4.41□□□□□ -1.7
CCDC12-204ENST00000460035 KRTAP12-1P59990 96 aa4.4□□□□□ -1.71
CCDC12-204ENST00000460035 UQCR11O14957 56 aa4.39□□□□□ -1.71
CCDC12-204ENST00000460035 PSPHP1O15172 72 aa4.38□□□□□ -1.71
CCDC12-204ENST00000460035 Q1T7F1 81 aa4.38□□□□□ -1.71
CCDC12-204ENST00000460035 RPS28P62857 69 aaKnown RBP4.36□□□□□ -1.71
CCDC12-204ENST00000460035 KRTAP10-7P60409 375 aaPredicted RBP4.35□□□□□ -1.71
CCDC12-204ENST00000460035 KRTAP10-12P60413 245 aa4.33□□□□□ -1.72
CCDC12-204ENST00000460035 KMT2DO14686 5537 aa4.32□□□□□ -1.72
CCDC12-204ENST00000460035 KRTAP5-9P26371 169 aa4.32□□□□□ -1.72
CCDC12-204ENST00000460035 MIR22HGQ0VDD5 57 aa4.32□□□□□ -1.72
CCDC12-204ENST00000460035 KRTAP4-8A0A0G2JLE6 195 aa4.3□□□□□ -1.72
CCDC12-204ENST00000460035 KRTAP8-1Q8IUC2 63 aa4.3□□□□□ -1.72
CCDC12-204ENST00000460035 KRTAP4-8Q9BYQ9 185 aa4.3□□□□□ -1.72
CCDC12-204ENST00000460035 NEBP20929 6669 aa4.25□□□□□ -1.73
CCDC12-204ENST00000460035 A6NED7 52 aa4.24□□□□□ -1.73
CCDC12-204ENST00000460035 SPRR2FQ96RM1 72 aa4.24□□□□□ -1.73
CCDC12-204ENST00000460035 MUC12Q9UKN1 5478 aa4.24□□□□□ -1.73
CCDC12-204ENST00000460035 K7ERS5 55 aa4.21□□□□□ -1.74
CCDC12-204ENST00000460035 C10orf95Q9H7T3 257 aa4.21□□□□□ -1.74
CCDC12-204ENST00000460035 KRTAP19-4Q3LI73 84 aa4.19□□□□□ -1.74
CCDC12-204ENST00000460035 LOC100996750A0A140TA64 210 aa4.17□□□□□ -1.74
CCDC12-204ENST00000460035 TNP1P09430 55 aa4.17□□□□□ -1.74
CCDC12-204ENST00000460035 KRTAP4-6Q9BYQ5 205 aa4.17□□□□□ -1.74
CCDC12-204ENST00000460035 KRTAP23-1A1A580 65 aa4.14□□□□□ -1.75
CCDC12-204ENST00000460035 MDN1Q9NU22 5596 aa4.14□□□□□ -1.75
CCDC12-204ENST00000460035 SPRR2EP22531 72 aa4.13□□□□□ -1.75
CCDC12-204ENST00000460035 SPRR2BP35325 72 aa4.13□□□□□ -1.75
CCDC12-204ENST00000460035 SPRR2AP35326 72 aa4.13□□□□□ -1.75
CCDC12-204ENST00000460035 LCE1AQ5T7P2 110 aa4.08□□□□□ -1.76
CCDC12-204ENST00000460035 KRTAP19-7Q3SYF9 63 aa4.06□□□□□ -1.76
CCDC12-204ENST00000460035 CDC42SE1Q9NRR8 79 aa4.06□□□□□ -1.76
CCDC12-204ENST00000460035 LCE3AQ5TA76 89 aa4.05□□□□□ -1.76
CCDC12-204ENST00000460035 KRTAP19-5Q3LI72 72 aa4.03□□□□□ -1.76
CCDC12-204ENST00000460035 MT1EP04732 61 aa4.02□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms