RNA–Protein interactions for RNA: ENST00000458258.5

PTBP3-207, Transcript of polypyrimidine tract binding protein 3, humanhuman

TSL 1 (best) BASIC

Gene PTBP3, Length 7,995 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTBP3-207ENST00000458258 RPS29P62273 56 aaKnown RBP2.81□□□□□ -1.96
PTBP3-207ENST00000458258 KRTAP3-2Q9BYR7 98 aa2.81□□□□□ -1.96
PTBP3-207ENST00000458258 Q75L30 129 aa2.81□□□□□ -1.96
PTBP3-207ENST00000458258 H3BS24 57 aa2.8□□□□□ -1.96
PTBP3-207ENST00000458258 NDUFC1O43677 76 aa2.8□□□□□ -1.96
PTBP3-207ENST00000458258 ADM2Q7Z4H4 148 aa2.8□□□□□ -1.96
PTBP3-207ENST00000458258 LCE2CQ5TA81 110 aa2.8□□□□□ -1.96
PTBP3-207ENST00000458258 BRK1Q8WUW1 75 aa2.8□□□□□ -1.96
PTBP3-207ENST00000458258 SPANXA2-OT1Q8N9U9 137 aa2.79□□□□□ -1.96
PTBP3-207ENST00000458258 KRTAP10-6P60371 365 aaPredicted RBP2.79□□□□□ -1.96
PTBP3-207ENST00000458258 COX6B2Q6YFQ2 88 aa2.79□□□□□ -1.96
PTBP3-207ENST00000458258 ATP11AUNQ6ZP68 121 aa2.79□□□□□ -1.96
PTBP3-207ENST00000458258 CRIPTQ9P021 101 aa2.78□□□□□ -1.96
PTBP3-207ENST00000458258 KMT2DO14686 5537 aa2.78□□□□□ -1.96
PTBP3-207ENST00000458258 H3BPC8 53 aa2.78□□□□□ -1.96
PTBP3-207ENST00000458258 CHKB-CPT1BH3BT56 60 aa2.77□□□□□ -1.97
PTBP3-207ENST00000458258 LINC01558Q9Y6Z2 57 aa2.76□□□□□ -1.97
PTBP3-207ENST00000458258 TPRXLQ17RH7 258 aa2.75□□□□□ -1.97
PTBP3-207ENST00000458258 Q1T7F1 81 aa2.75□□□□□ -1.97
PTBP3-207ENST00000458258 H0YAA0 97 aa2.74□□□□□ -1.97
PTBP3-207ENST00000458258 ACYP2P14621 99 aa2.73□□□□□ -1.97
PTBP3-207ENST00000458258 A0A0D9SG42 100 aa2.72□□□□□ -1.97
PTBP3-207ENST00000458258 SPTSSBQ8NFR3 76 aa2.72□□□□□ -1.97
PTBP3-207ENST00000458258 PRAC1Q96KF2 57 aa2.72□□□□□ -1.97
PTBP3-207ENST00000458258 ATP5EP56381 51 aaPredicted RBP2.7□□□□□ -1.98
PTBP3-207ENST00000458258 A6NED7 52 aa2.69□□□□□ -1.98
PTBP3-207ENST00000458258 A0A1B0GU69 56 aa2.68□□□□□ -1.98
PTBP3-207ENST00000458258 OBSCNQ5VST9 7968 aa2.67□□□□□ -1.98
PTBP3-207ENST00000458258 LINC01554Q52M75 96 aa2.66□□□□□ -1.98
PTBP3-207ENST00000458258 MT1HP80294 61 aa2.65□□□□□ -1.99
PTBP3-207ENST00000458258 S4R3F8 94 aa2.65□□□□□ -1.99
PTBP3-207ENST00000458258 KRTAP12-2P59991 146 aa2.64□□□□□ -1.99
PTBP3-207ENST00000458258 MT1FP04733 61 aa2.64□□□□□ -1.99
PTBP3-207ENST00000458258 H1FX-AS1Q4G0G2 97 aa2.64□□□□□ -1.99
PTBP3-207ENST00000458258 SVIPQ8NHG7 77 aa2.64□□□□□ -1.99
PTBP3-207ENST00000458258 C10orf95Q9H7T3 257 aa2.62□□□□□ -1.99
PTBP3-207ENST00000458258 FLGP20930 4061 aaPredicted RBP2.62□□□□□ -1.99
PTBP3-207ENST00000458258 A0A1B0GU33 70 aa2.61□□□□□ -1.99
PTBP3-207ENST00000458258 A6NN06 94 aa2.61□□□□□ -1.99
PTBP3-207ENST00000458258 PRO0628Q9UI54 55 aa2.61□□□□□ -1.99
PTBP3-207ENST00000458258 MUC12Q9UKN1 5478 aa2.6□□□□□ -1.99
PTBP3-207ENST00000458258 MIR22HGQ0VDD5 57 aa2.6□□□□□ -1.99
PTBP3-207ENST00000458258 MT2AP02795 61 aa2.59□□□□□ -1.99
PTBP3-207ENST00000458258 CDC42SE1Q9NRR8 79 aa2.59□□□□□ -1.99
PTBP3-207ENST00000458258 KRTAP9-8Q9BYQ0 159 aa2.59□□□□□ -2
PTBP3-207ENST00000458258 SEC61BP60468 96 aaKnown RBP2.58□□□□□ -2
PTBP3-207ENST00000458258 PMAIP1Q13794 54 aa2.58□□□□□ -2
PTBP3-207ENST00000458258 KRTAP19-1Q8IUB9 90 aa2.58□□□□□ -2
PTBP3-207ENST00000458258 DSTQ03001 7570 aaKnown RBP2.57□□□□□ -2
PTBP3-207ENST00000458258 SPINT4Q6UDR6 99 aa2.57□□□□□ -2
PTBP3-207ENST00000458258 KRTAP12-1P59990 96 aa2.57□□□□□ -2
PTBP3-207ENST00000458258 FCGBPQ9Y6R7 5405 aaPredicted RBP2.56□□□□□ -2
PTBP3-207ENST00000458258 UQCR11O14957 56 aa2.55□□□□□ -2
PTBP3-207ENST00000458258 CSAG1Q6PB30 78 aa2.55□□□□□ -2
PTBP3-207ENST00000458258 RBM12B-AS1Q9P1G2 102 aa2.55□□□□□ -2
PTBP3-207ENST00000458258 M0QZ58 72 aa2.55□□□□□ -2
PTBP3-207ENST00000458258 V9GYY9 64 aa2.52□□□□□ -2.01
PTBP3-207ENST00000458258 M0R2T5 61 aa2.52□□□□□ -2.01
PTBP3-207ENST00000458258 LCE2BO14633 110 aa2.52□□□□□ -2.01
PTBP3-207ENST00000458258 LCE2AQ5TA79 106 aaPredicted RBP2.5□□□□□ -2.01
PTBP3-207ENST00000458258 KRTAP10-10P60014 251 aa2.49□□□□□ -2.01
PTBP3-207ENST00000458258 MT1BP07438 61 aa2.48□□□□□ -2.01
PTBP3-207ENST00000458258 R4GN34 69 aa2.48□□□□□ -2.01
PTBP3-207ENST00000458258 KRTAP9-3Q9BYQ3 159 aa2.47□□□□□ -2.01
PTBP3-207ENST00000458258 MDN1Q9NU22 5596 aa2.47□□□□□ -2.01
PTBP3-207ENST00000458258 MACF1Q9UPN3 7388 aaKnown RBP2.47□□□□□ -2.01
PTBP3-207ENST00000458258 SEC61GP60059 68 aa2.46□□□□□ -2.02
PTBP3-207ENST00000458258 SYNE1Q8NF91 8797 aaKnown RBP2.43□□□□□ -2.02
PTBP3-207ENST00000458258 KRTAP4-8A0A0G2JLE6 195 aa2.42□□□□□ -2.02
PTBP3-207ENST00000458258 KRTAP4-8Q9BYQ9 185 aa2.42□□□□□ -2.02
PTBP3-207ENST00000458258 SYNE2Q8WXH0 6885 aaKnown RBP2.42□□□□□ -2.02
PTBP3-207ENST00000458258 KTN1-AS1Q86SY8 53 aa2.39□□□□□ -2.03
PTBP3-207ENST00000458258 KRTAP10-7P60409 375 aaPredicted RBP2.39□□□□□ -2.03
PTBP3-207ENST00000458258 KRTAP10-5P60370 271 aa2.38□□□□□ -2.03
PTBP3-207ENST00000458258 MT1XP80297 61 aa2.38□□□□□ -2.03
PTBP3-207ENST00000458258 SPRR2GQ9BYE4 73 aa2.37□□□□□ -2.03
PTBP3-207ENST00000458258 A0A0A0MQY5 61 aa2.37□□□□□ -2.03
PTBP3-207ENST00000458258 ROMO1P60602 79 aa2.33□□□□□ -2.04
PTBP3-207ENST00000458258 KRTAP25-1Q3LHN0 102 aa2.32□□□□□ -2.04
PTBP3-207ENST00000458258 CAMK2N1Q7Z7J9 78 aa2.32□□□□□ -2.04
PTBP3-207ENST00000458258 KRTAP19-8Q3LI54 63 aa2.32□□□□□ -2.04
PTBP3-207ENST00000458258 KRTAP4-7Q9BYR0 210 aa2.31□□□□□ -2.04
PTBP3-207ENST00000458258 LCE3AQ5TA76 89 aa2.3□□□□□ -2.04
PTBP3-207ENST00000458258 LCE2DQ5TA82 110 aaPredicted RBP2.21□□□□□ -2.06
PTBP3-207ENST00000458258 KRTAP4-3Q9BYR4 195 aa2.21□□□□□ -2.06
PTBP3-207ENST00000458258 K7ERS5 55 aa2.2□□□□□ -2.06
PTBP3-207ENST00000458258 PLAC4Q8WY50 150 aa2.19□□□□□ -2.06
PTBP3-207ENST00000458258 KRTAP19-5Q3LI72 72 aa2.17□□□□□ -2.06
PTBP3-207ENST00000458258 KRTAP19-7Q3SYF9 63 aa2.17□□□□□ -2.06
PTBP3-207ENST00000458258 KRTAP9-6A8MVA2 160 aa2.15□□□□□ -2.07
PTBP3-207ENST00000458258 KRTAP15-1Q3LI76 137 aa2.14□□□□□ -2.07
PTBP3-207ENST00000458258 TNP1P09430 55 aa2.13□□□□□ -2.07
PTBP3-207ENST00000458258 KRTAP9-2Q9BYQ4 174 aa2.13□□□□□ -2.07
PTBP3-207ENST00000458258 KRTAP10-12P60413 245 aa2.12□□□□□ -2.07
PTBP3-207ENST00000458258 LOC100996750A0A140TA64 210 aa2.12□□□□□ -2.07
PTBP3-207ENST00000458258 KRTAP8-1Q8IUC2 63 aa2.11□□□□□ -2.07
PTBP3-207ENST00000458258 KRTAP12-3P60328 96 aa2.08□□□□□ -2.08
PTBP3-207ENST00000458258 KRTAP19-6Q3LI70 58 aa2.08□□□□□ -2.08
PTBP3-207ENST00000458258 NDUFAF8A1L188 74 aa2.08□□□□□ -2.08
PTBP3-207ENST00000458258 MT1EP04732 61 aa2.03□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 173.6 ms