RNA–Protein interactions for RNA: ENST00000458034.1

RFX3-211, Transcript of regulatory factor X3, humanhuman

TSL 3

Gene RFX3, Length 814 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-211ENST00000458034 SMR3BP02814 79 aaPredicted RBP6.03□□□□□ -1.44
RFX3-211ENST00000458034 A8MUU9 505 aa6.02□□□□□ -1.45
RFX3-211ENST00000458034 C20orf166-AS1Q96NR2 134 aa6.02□□□□□ -1.45
RFX3-211ENST00000458034 VPS13BQ7Z7G8 4022 aa6.02□□□□□ -1.45
RFX3-211ENST00000458034 UQCR11O14957 56 aa5.99□□□□□ -1.45
RFX3-211ENST00000458034 SEC61GP60059 68 aa5.99□□□□□ -1.45
RFX3-211ENST00000458034 HYDINQ4G0P3 5121 aa5.99□□□□□ -1.45
RFX3-211ENST00000458034 SPATA8Q6RVD6 105 aa5.98□□□□□ -1.45
RFX3-211ENST00000458034 C9orf92A6NGG3 77 aa5.97□□□□□ -1.45
RFX3-211ENST00000458034 KRTAP10-4P60372 401 aaPredicted RBP5.97□□□□□ -1.45
RFX3-211ENST00000458034 MIR22HGQ0VDD5 57 aa5.96□□□□□ -1.46
RFX3-211ENST00000458034 Q8N1X5 172 aa5.96□□□□□ -1.46
RFX3-211ENST00000458034 DYNC1H1Q14204 4646 aaKnown RBP5.92□□□□□ -1.46
RFX3-211ENST00000458034 PKHD1L1Q86WI1 4243 aa5.91□□□□□ -1.46
RFX3-211ENST00000458034 APOBP04114 4563 aaKnown RBP5.89□□□□□ -1.47
RFX3-211ENST00000458034 COX6B2Q6YFQ2 88 aa5.84□□□□□ -1.47
RFX3-211ENST00000458034 RBM12B-AS1Q9P1G2 102 aa5.82□□□□□ -1.48
RFX3-211ENST00000458034 PKHD1P08F94 4074 aa5.81□□□□□ -1.48
RFX3-211ENST00000458034 KRTAP10-8P60410 259 aa5.8□□□□□ -1.48
RFX3-211ENST00000458034 KRTAP3-1Q9BYR8 98 aa5.8□□□□□ -1.48
RFX3-211ENST00000458034 Q5VSD8 79 aa5.78□□□□□ -1.48
RFX3-211ENST00000458034 A0A1B0GU33 70 aa5.77□□□□□ -1.49
RFX3-211ENST00000458034 RPL37P61927 97 aaKnown RBP5.77□□□□□ -1.49
RFX3-211ENST00000458034 FLG2Q5D862 2391 aaPredicted RBP5.76□□□□□ -1.49
RFX3-211ENST00000458034 H1FX-AS1Q4G0G2 97 aa5.76□□□□□ -1.49
RFX3-211ENST00000458034 FAT1Q14517 4588 aa5.73□□□□□ -1.49
RFX3-211ENST00000458034 H3BS24 57 aa5.72□□□□□ -1.49
RFX3-211ENST00000458034 H0YAA0 97 aa5.71□□□□□ -1.5
RFX3-211ENST00000458034 RYR2Q92736 4967 aa5.69□□□□□ -1.5
RFX3-211ENST00000458034 K7ERS5 55 aa5.68□□□□□ -1.5
RFX3-211ENST00000458034 PRAC1Q96KF2 57 aa5.68□□□□□ -1.5
RFX3-211ENST00000458034 TNXBP22105 4242 aa5.66□□□□□ -1.5
RFX3-211ENST00000458034 FAT3Q8TDW7 4589 aa5.66□□□□□ -1.5
RFX3-211ENST00000458034 ADM2Q7Z4H4 148 aa5.65□□□□□ -1.5
RFX3-211ENST00000458034 S4R3F8 94 aa5.64□□□□□ -1.51
RFX3-211ENST00000458034 HSPG2P98160 4391 aa5.59□□□□□ -1.51
RFX3-211ENST00000458034 MT1HL1P0DM35 61 aa5.58□□□□□ -1.52
RFX3-211ENST00000458034 CSAG1Q6PB30 78 aa5.58□□□□□ -1.52
RFX3-211ENST00000458034 LINC01554Q52M75 96 aa5.57□□□□□ -1.52
RFX3-211ENST00000458034 TPRXLQ17RH7 258 aa5.54□□□□□ -1.52
RFX3-211ENST00000458034 KRTAP10-6P60371 365 aaPredicted RBP5.53□□□□□ -1.52
RFX3-211ENST00000458034 LRP1Q07954 4544 aaKnown RBP5.51□□□□□ -1.53
RFX3-211ENST00000458034 DMBT1Q9UGM3 2413 aaPredicted RBP5.49□□□□□ -1.53
RFX3-211ENST00000458034 RYR1P21817 5038 aa5.48□□□□□ -1.53
RFX3-211ENST00000458034 KRTAP25-1Q3LHN0 102 aa5.48□□□□□ -1.53
RFX3-211ENST00000458034 ROMO1P60602 79 aa5.46□□□□□ -1.54
RFX3-211ENST00000458034 KMT2CQ8NEZ4 4911 aaKnown RBP5.46□□□□□ -1.54
RFX3-211ENST00000458034 A0A0D9SG42 100 aa5.43□□□□□ -1.54
RFX3-211ENST00000458034 KRTAP13-4Q3LI77 160 aa5.42□□□□□ -1.54
RFX3-211ENST00000458034 P0C880 135 aa5.41□□□□□ -1.54
RFX3-211ENST00000458034 M0QZ58 72 aa5.38□□□□□ -1.55
RFX3-211ENST00000458034 SEC61BP60468 96 aaKnown RBP5.38□□□□□ -1.55
RFX3-211ENST00000458034 MYCBP2O75592 4640 aa5.35□□□□□ -1.55
RFX3-211ENST00000458034 RYR3Q15413 4870 aa5.31□□□□□ -1.56
RFX3-211ENST00000458034 KRTAP12-1P59990 96 aa5.28□□□□□ -1.56
RFX3-211ENST00000458034 SPINT4Q6UDR6 99 aa5.28□□□□□ -1.56
RFX3-211ENST00000458034 KRTAP12-2P59991 146 aa5.27□□□□□ -1.57
RFX3-211ENST00000458034 CRIPTQ9P021 101 aa5.27□□□□□ -1.57
RFX3-211ENST00000458034 KIAA1109Q2LD37 5005 aa5.26□□□□□ -1.57
RFX3-211ENST00000458034 R4GN34 69 aa5.21□□□□□ -1.58
RFX3-211ENST00000458034 LRP2P98164 4655 aa5.18□□□□□ -1.58
RFX3-211ENST00000458034 C10orf95Q9H7T3 257 aa5.13□□□□□ -1.59
RFX3-211ENST00000458034 MUC17Q685J3 4493 aa5.12□□□□□ -1.59
RFX3-211ENST00000458034 KRTAP4-1Q9BYQ7 146 aa5.12□□□□□ -1.59
RFX3-211ENST00000458034 LPAP08519 4548 aa5.11□□□□□ -1.59
RFX3-211ENST00000458034 EPPK1P58107 5090 aaKnown RBP5.11□□□□□ -1.59
RFX3-211ENST00000458034 KRTAP19-2Q3LHN2 52 aa5.05□□□□□ -1.6
RFX3-211ENST00000458034 ABCA13Q86UQ4 5058 aa4.98□□□□□ -1.61
RFX3-211ENST00000458034 CAMK2N1Q7Z7J9 78 aa4.96□□□□□ -1.62
RFX3-211ENST00000458034 KRTAP15-1Q3LI76 137 aa4.95□□□□□ -1.62
RFX3-211ENST00000458034 PP632Q6XCG6 107 aa4.93□□□□□ -1.62
RFX3-211ENST00000458034 HERC2O95714 4834 aa4.9□□□□□ -1.63
RFX3-211ENST00000458034 BIRC6Q9NR09 4857 aa4.88□□□□□ -1.63
RFX3-211ENST00000458034 FLGP20930 4061 aaPredicted RBP4.87□□□□□ -1.63
RFX3-211ENST00000458034 HERC1Q15751 4861 aa4.83□□□□□ -1.64
RFX3-211ENST00000458034 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.82□□□□□ -1.64
RFX3-211ENST00000458034 TNP1P09430 55 aa4.8□□□□□ -1.64
RFX3-211ENST00000458034 PLAC4Q8WY50 150 aa4.8□□□□□ -1.64
RFX3-211ENST00000458034 KRTAP23-1A1A580 65 aa4.79□□□□□ -1.64
RFX3-211ENST00000458034 NDUFAF8A1L188 74 aa4.77□□□□□ -1.65
RFX3-211ENST00000458034 M0R2T5 61 aa4.73□□□□□ -1.65
RFX3-211ENST00000458034 SPRR2GQ9BYE4 73 aa4.73□□□□□ -1.65
RFX3-211ENST00000458034 MT1HP80294 61 aa4.66□□□□□ -1.66
RFX3-211ENST00000458034 HMCN2Q8NDA2 5059 aa4.64□□□□□ -1.67
RFX3-211ENST00000458034 LUZP6Q538Z0 58 aa4.64□□□□□ -1.67
RFX3-211ENST00000458034 KRTAP5-11Q6L8G4 156 aa4.64□□□□□ -1.67
RFX3-211ENST00000458034 KRTAP10-10P60014 251 aa4.61□□□□□ -1.67
RFX3-211ENST00000458034 KRTAP10-7P60409 375 aaPredicted RBP4.61□□□□□ -1.67
RFX3-211ENST00000458034 MT2AP02795 61 aa4.59□□□□□ -1.67
RFX3-211ENST00000458034 PCLOQ9Y6V0 5065 aa4.58□□□□□ -1.68
RFX3-211ENST00000458034 MT1FP04733 61 aa4.56□□□□□ -1.68
RFX3-211ENST00000458034 KRTAP19-8Q3LI54 63 aa4.55□□□□□ -1.68
RFX3-211ENST00000458034 MUC2Q02817 5179 aa4.5□□□□□ -1.69
RFX3-211ENST00000458034 SPRR5A0A1B0GTR4 108 aa4.48□□□□□ -1.69
RFX3-211ENST00000458034 LCE3AQ5TA76 89 aa4.46□□□□□ -1.7
RFX3-211ENST00000458034 LCE1AQ5T7P2 110 aa4.44□□□□□ -1.7
RFX3-211ENST00000458034 RNF213Q63HN8 5207 aa4.42□□□□□ -1.7
RFX3-211ENST00000458034 MT1BP07438 61 aa4.42□□□□□ -1.7
RFX3-211ENST00000458034 A0A0A0MQY5 61 aa4.39□□□□□ -1.71
RFX3-211ENST00000458034 KRTAP8-1Q8IUC2 63 aa4.39□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms