RNA–Protein interactions for RNA: ENST00000457863.1

HMGB3P30-201, Transcript of high mobility group box 3 pseudogene 30, humanhuman

BASIC

Gene HMGB3P30, Length 606 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P30-201ENST00000457863 MTORP42345 2549 aa0.9□□□□□ -2.27
HMGB3P30-201ENST00000457863 NCOR2Q9Y618 2525 aa0.9□□□□□ -2.27
HMGB3P30-201ENST00000457863 FLNCQ14315 2725 aa0.9□□□□□ -2.27
HMGB3P30-201ENST00000457863 DMXL2Q8TDJ6 3036 aa0.9□□□□□ -2.27
HMGB3P30-201ENST00000457863 SACSQ9NZJ4 4579 aa0.9□□□□□ -2.27
HMGB3P30-201ENST00000457863 BRCA2P51587 3418 aa0.9□□□□□ -2.27
HMGB3P30-201ENST00000457863 NBEAL2Q6ZNJ1 2754 aa0.9□□□□□ -2.27
HMGB3P30-201ENST00000457863 LRBAP50851 2863 aa0.9□□□□□ -2.27
HMGB3P30-201ENST00000457863 WDFY4Q6ZS81 3184 aa0.9□□□□□ -2.27
HMGB3P30-201ENST00000457863 CDH23Q9H251 3354 aa0.9□□□□□ -2.27
HMGB3P30-201ENST00000457863 UNC79Q9P2D8 2635 aa0.89□□□□□ -2.27
HMGB3P30-201ENST00000457863 NIPBLQ6KC79 2804 aaeCLIP0.89□□□□□ -2.27
HMGB3P30-201ENST00000457863 DNAH14Q0VDD8 3507 aa0.89□□□□□ -2.27
HMGB3P30-201ENST00000457863 VCANP13611 3396 aa0.89□□□□□ -2.27
HMGB3P30-201ENST00000457863 TEX15Q9BXT5 2789 aa0.89□□□□□ -2.27
HMGB3P30-201ENST00000457863 USP9YO00507 2555 aaPredicted RBP0.89□□□□□ -2.27
HMGB3P30-201ENST00000457863 STAB1Q9NY15 2570 aa0.89□□□□□ -2.27
HMGB3P30-201ENST00000457863 APCP25054 2843 aa0.88□□□□□ -2.27
HMGB3P30-201ENST00000457863 CFAP46Q8IYW2 2715 aa0.88□□□□□ -2.27
HMGB3P30-201ENST00000457863 LRRK2Q5S007 2527 aa0.88□□□□□ -2.27
HMGB3P30-201ENST00000457863 ADGRG4Q8IZF6 3080 aa0.88□□□□□ -2.27
HMGB3P30-201ENST00000457863 USP9XQ93008 2570 aaPredicted RBP0.88□□□□□ -2.27
HMGB3P30-201ENST00000457863 DOPEY1Q5JWR5 2465 aa0.88□□□□□ -2.27
HMGB3P30-201ENST00000457863 CELSR3Q9NYQ7 3312 aa0.88□□□□□ -2.27
HMGB3P30-201ENST00000457863 DNAH3Q8TD57 4116 aa0.88□□□□□ -2.27
HMGB3P30-201ENST00000457863 MXRA5Q9NR99 2828 aa0.88□□□□□ -2.27
HMGB3P30-201ENST00000457863 SPEGQ15772 3267 aa0.87□□□□□ -2.27
HMGB3P30-201ENST00000457863 DMXL1Q9Y485 3027 aa0.87□□□□□ -2.27
HMGB3P30-201ENST00000457863 SONP18583 2426 aaKnown RBP0.87□□□□□ -2.27
HMGB3P30-201ENST00000457863 ITPR3Q14573 2671 aa0.87□□□□□ -2.27
HMGB3P30-201ENST00000457863 HUWE1Q7Z6Z7 4374 aaKnown RBP0.86□□□□□ -2.27
HMGB3P30-201ENST00000457863 CRYBG3Q68DQ2 2970 aa0.86□□□□□ -2.27
HMGB3P30-201ENST00000457863 HIVEP1P15822 2718 aa0.86□□□□□ -2.27
HMGB3P30-201ENST00000457863 NBPF19A0A087WUL8 3843 aa0.86□□□□□ -2.27
HMGB3P30-201ENST00000457863 USP34Q70CQ2 3546 aa0.86□□□□□ -2.27
HMGB3P30-201ENST00000457863 CENPEQ02224 2701 aa0.86□□□□□ -2.27
HMGB3P30-201ENST00000457863 BOD1L1Q8NFC6 3051 aa0.85□□□□□ -2.27
HMGB3P30-201ENST00000457863 SPENQ96T58 3664 aaKnown RBP0.85□□□□□ -2.27
HMGB3P30-201ENST00000457863 PKD1L1Q8TDX9 2849 aa0.85□□□□□ -2.27
HMGB3P30-201ENST00000457863 ZANQ9Y493 2812 aa0.85□□□□□ -2.27
HMGB3P30-201ENST00000457863 TEP1Q99973 2627 aaKnown RBP0.85□□□□□ -2.27
HMGB3P30-201ENST00000457863 MYCBP2O75592 4640 aa0.84□□□□□ -2.27
HMGB3P30-201ENST00000457863 DMDP11532 3685 aa0.84□□□□□ -2.27
HMGB3P30-201ENST00000457863 WDFY3Q8IZQ1 3526 aa0.84□□□□□ -2.28
HMGB3P30-201ENST00000457863 NSD1Q96L73 2696 aaPredicted RBP0.84□□□□□ -2.28
HMGB3P30-201ENST00000457863 COL12A1Q99715 3063 aa0.84□□□□□ -2.28
HMGB3P30-201ENST00000457863 ATMQ13315 3056 aa0.83□□□□□ -2.28
HMGB3P30-201ENST00000457863 DCHS1Q96JQ0 3298 aa0.83□□□□□ -2.28
HMGB3P30-201ENST00000457863 MYO18BQ8IUG5 2567 aa0.83□□□□□ -2.28
HMGB3P30-201ENST00000457863 RPS29P62273 56 aaKnown RBP0.83□□□□□ -2.28
HMGB3P30-201ENST00000457863 ACACBO00763 2458 aa0.83□□□□□ -2.28
HMGB3P30-201ENST00000457863 NBEAL1Q6ZS30 2694 aa0.82□□□□□ -2.28
HMGB3P30-201ENST00000457863 ZFHX4Q86UP3 3567 aa0.82□□□□□ -2.28
HMGB3P30-201ENST00000457863 CUBNO60494 3623 aa0.82□□□□□ -2.28
HMGB3P30-201ENST00000457863 LOC400499M0QZD8 3231 aa0.82□□□□□ -2.28
HMGB3P30-201ENST00000457863 SMG1Q96Q15 3661 aaKnown RBP0.82□□□□□ -2.28
HMGB3P30-201ENST00000457863 PKHD1L1Q86WI1 4243 aa0.82□□□□□ -2.28
HMGB3P30-201ENST00000457863 TENM3Q9P273 2699 aa0.82□□□□□ -2.28
HMGB3P30-201ENST00000457863 SPTBN5Q9NRC6 3674 aaKnown RBP0.82□□□□□ -2.28
HMGB3P30-201ENST00000457863 CSMD1Q96PZ7 3565 aa0.81□□□□□ -2.28
HMGB3P30-201ENST00000457863 CACNA1AO00555 2505 aa0.81□□□□□ -2.28
HMGB3P30-201ENST00000457863 FLNAP21333 2647 aaKnown RBP0.81□□□□□ -2.28
HMGB3P30-201ENST00000457863 FLNBO75369 2602 aaKnown RBP0.81□□□□□ -2.28
HMGB3P30-201ENST00000457863 DYNC2H1Q8NCM8 4307 aaKnown RBP0.8□□□□□ -2.28
HMGB3P30-201ENST00000457863 DNAH7Q8WXX0 4024 aa0.8□□□□□ -2.28
HMGB3P30-201ENST00000457863 TGP01266 2768 aa0.8□□□□□ -2.28
HMGB3P30-201ENST00000457863 MYO15AQ9UKN7 3530 aa0.8□□□□□ -2.28
HMGB3P30-201ENST00000457863 FASNP49327 2511 aaKnown RBP0.8□□□□□ -2.28
HMGB3P30-201ENST00000457863 KRTAP8-1Q8IUC2 63 aa0.8□□□□□ -2.28
HMGB3P30-201ENST00000457863 MAST4O15021 2626 aa0.8□□□□□ -2.28
HMGB3P30-201ENST00000457863 IGSF10Q6WRI0 2623 aa0.8□□□□□ -2.28
HMGB3P30-201ENST00000457863 ANK3Q12955 4377 aaKnown RBP0.79□□□□□ -2.28
HMGB3P30-201ENST00000457863 STAB2Q8WWQ8 2551 aa0.79□□□□□ -2.28
HMGB3P30-201ENST00000457863 ITPR2Q14571 2701 aa0.79□□□□□ -2.28
HMGB3P30-201ENST00000457863 SPRR2DP22532 72 aa0.79□□□□□ -2.28
HMGB3P30-201ENST00000457863 PKD1P98161 4303 aa0.79□□□□□ -2.28
HMGB3P30-201ENST00000457863 EYSQ5T1H1 3165 aa0.79□□□□□ -2.28
HMGB3P30-201ENST00000457863 RELNP78509 3460 aa0.79□□□□□ -2.28
HMGB3P30-201ENST00000457863 KRTAP21-1Q3LI58 79 aa0.78□□□□□ -2.28
HMGB3P30-201ENST00000457863 SVEP1Q4LDE5 3571 aa0.78□□□□□ -2.28
HMGB3P30-201ENST00000457863 LAMA5O15230 3695 aa0.77□□□□□ -2.29
HMGB3P30-201ENST00000457863 DNAH2Q9P225 4427 aa0.77□□□□□ -2.29
HMGB3P30-201ENST00000457863 ASPMQ8IZT6 3477 aa0.76□□□□□ -2.29
HMGB3P30-201ENST00000457863 HECTD4Q9Y4D8 3996 aa0.76□□□□□ -2.29
HMGB3P30-201ENST00000457863 SPRR2BP35325 72 aa0.76□□□□□ -2.29
HMGB3P30-201ENST00000457863 COL7A1Q02388 2944 aa0.75□□□□□ -2.29
HMGB3P30-201ENST00000457863 DNAH8Q96JB1 4490 aa0.75□□□□□ -2.29
HMGB3P30-201ENST00000457863 AKAP9Q99996 3911 aa0.75□□□□□ -2.29
HMGB3P30-201ENST00000457863 HSPG2P98160 4391 aa0.74□□□□□ -2.29
HMGB3P30-201ENST00000457863 MGAM2Q2M2H8 2515 aa0.74□□□□□ -2.29
HMGB3P30-201ENST00000457863 DNAH6Q9C0G6 4158 aa0.74□□□□□ -2.29
HMGB3P30-201ENST00000457863 FLGP20930 4061 aaPredicted RBP0.73□□□□□ -2.29
HMGB3P30-201ENST00000457863 LPAP08519 4548 aa0.72□□□□□ -2.29
HMGB3P30-201ENST00000457863 LRP1Q07954 4544 aaKnown RBP0.72□□□□□ -2.29
HMGB3P30-201ENST00000457863 SYNE1Q8NF91 8797 aaKnown RBP0.72□□□□□ -2.29
HMGB3P30-201ENST00000457863 MUC3AQ02505 3323 aa0.72□□□□□ -2.29
HMGB3P30-201ENST00000457863 DNAH1Q9P2D7 4330 aa0.72□□□□□ -2.29
HMGB3P30-201ENST00000457863 KRTAP5-10Q6L8G5 202 aa0.71□□□□□ -2.3
HMGB3P30-201ENST00000457863 DNAH9Q9NYC9 4486 aa0.71□□□□□ -2.3
HMGB3P30-201ENST00000457863 MT1AP04731 61 aa0.7□□□□□ -2.3
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms