RNA–Protein interactions for RNA: ENST00000457183.6

THBS3-203, Transcript of thrombospondin 3, humanhuman

TSL 2 BASIC

Gene THBS3, Length 2,727 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THBS3-203ENST00000457183 ROMO1P60602 79 aa5.44□□□□□ -1.54
THBS3-203ENST00000457183 LCE2DQ5TA82 110 aaPredicted RBP5.43□□□□□ -1.54
THBS3-203ENST00000457183 TYMSOSQ8TAI1 123 aa5.41□□□□□ -1.54
THBS3-203ENST00000457183 DMBT1Q9UGM3 2413 aaPredicted RBP5.41□□□□□ -1.54
THBS3-203ENST00000457183 MYCBP2O75592 4640 aa5.4□□□□□ -1.54
THBS3-203ENST00000457183 RPS29P62273 56 aaKnown RBP5.37□□□□□ -1.55
THBS3-203ENST00000457183 LINC00304Q8N9R0 145 aa5.35□□□□□ -1.55
THBS3-203ENST00000457183 P0C880 135 aa5.34□□□□□ -1.55
THBS3-203ENST00000457183 KRTAP10-8P60410 259 aa5.33□□□□□ -1.56
THBS3-203ENST00000457183 LRP1Q07954 4544 aaKnown RBP5.33□□□□□ -1.56
THBS3-203ENST00000457183 H0YAA0 97 aa5.32□□□□□ -1.56
THBS3-203ENST00000457183 HERC1Q15751 4861 aa5.32□□□□□ -1.56
THBS3-203ENST00000457183 A8MUU9 505 aa5.31□□□□□ -1.56
THBS3-203ENST00000457183 MT1HL1P0DM35 61 aa5.28□□□□□ -1.56
THBS3-203ENST00000457183 FAT3Q8TDW7 4589 aa5.28□□□□□ -1.56
THBS3-203ENST00000457183 KRTAP25-1Q3LHN0 102 aa5.28□□□□□ -1.56
THBS3-203ENST00000457183 A0A1B0GU33 70 aa5.26□□□□□ -1.57
THBS3-203ENST00000457183 KRTAP3-1Q9BYR8 98 aa5.25□□□□□ -1.57
THBS3-203ENST00000457183 CRIPTQ9P021 101 aa5.25□□□□□ -1.57
THBS3-203ENST00000457183 TNXBP22105 4242 aa5.25□□□□□ -1.57
THBS3-203ENST00000457183 C9orf92A6NGG3 77 aa5.23□□□□□ -1.57
THBS3-203ENST00000457183 H1FX-AS1Q4G0G2 97 aa5.22□□□□□ -1.57
THBS3-203ENST00000457183 C20orf166-AS1Q96NR2 134 aa5.21□□□□□ -1.58
THBS3-203ENST00000457183 NDUFAF8A1L188 74 aa5.2□□□□□ -1.58
THBS3-203ENST00000457183 COX6B2Q6YFQ2 88 aa5.14□□□□□ -1.59
THBS3-203ENST00000457183 HMCN2Q8NDA2 5059 aa5.13□□□□□ -1.59
THBS3-203ENST00000457183 K7ERS5 55 aa5.12□□□□□ -1.59
THBS3-203ENST00000457183 LUZP6Q538Z0 58 aa5.11□□□□□ -1.59
THBS3-203ENST00000457183 SEC61BP60468 96 aaKnown RBP5.06□□□□□ -1.6
THBS3-203ENST00000457183 TPRXLQ17RH7 258 aa5.04□□□□□ -1.6
THBS3-203ENST00000457183 SPINT4Q6UDR6 99 aa5.04□□□□□ -1.6
THBS3-203ENST00000457183 A0A0D9SG42 100 aa5.04□□□□□ -1.6
THBS3-203ENST00000457183 KRTAP10-6P60371 365 aaPredicted RBP5.03□□□□□ -1.6
THBS3-203ENST00000457183 RPL37P61927 97 aaKnown RBP5.03□□□□□ -1.6
THBS3-203ENST00000457183 KRTAP13-4Q3LI77 160 aa5.03□□□□□ -1.6
THBS3-203ENST00000457183 LRP2P98164 4655 aa5.02□□□□□ -1.61
THBS3-203ENST00000457183 UBR4Q5T4S7 5183 aa5.01□□□□□ -1.61
THBS3-203ENST00000457183 XP32Q5T750 250 aa5□□□□□ -1.61
THBS3-203ENST00000457183 LCE2CQ5TA81 110 aa4.98□□□□□ -1.61
THBS3-203ENST00000457183 C10orf95Q9H7T3 257 aa4.98□□□□□ -1.61
THBS3-203ENST00000457183 LPAP08519 4548 aa4.97□□□□□ -1.61
THBS3-203ENST00000457183 LCE2AQ5TA79 106 aaPredicted RBP4.94□□□□□ -1.62
THBS3-203ENST00000457183 S4R3F8 94 aa4.92□□□□□ -1.62
THBS3-203ENST00000457183 LCE2BO14633 110 aa4.91□□□□□ -1.62
THBS3-203ENST00000457183 KRTAP15-1Q3LI76 137 aa4.91□□□□□ -1.62
THBS3-203ENST00000457183 KRTAP12-2P59991 146 aa4.88□□□□□ -1.63
THBS3-203ENST00000457183 RNF213Q63HN8 5207 aa4.86□□□□□ -1.63
THBS3-203ENST00000457183 KRTAP12-1P59990 96 aa4.81□□□□□ -1.64
THBS3-203ENST00000457183 MUC17Q685J3 4493 aa4.79□□□□□ -1.64
THBS3-203ENST00000457183 MUC2Q02817 5179 aa4.75□□□□□ -1.65
THBS3-203ENST00000457183 KRTAP23-1A1A580 65 aa4.74□□□□□ -1.65
THBS3-203ENST00000457183 M0QZ58 72 aa4.73□□□□□ -1.65
THBS3-203ENST00000457183 KRTAP4-1Q9BYQ7 146 aa4.7□□□□□ -1.66
THBS3-203ENST00000457183 FAT4Q6V0I7 4981 aa4.62□□□□□ -1.67
THBS3-203ENST00000457183 KRTAP19-2Q3LHN2 52 aa4.6□□□□□ -1.67
THBS3-203ENST00000457183 R4GN34 69 aa4.59□□□□□ -1.67
THBS3-203ENST00000457183 LORP23490 312 aaPredicted RBP4.58□□□□□ -1.68
THBS3-203ENST00000457183 PLAC4Q8WY50 150 aa4.56□□□□□ -1.68
THBS3-203ENST00000457183 CAMK2N1Q7Z7J9 78 aa4.53□□□□□ -1.68
THBS3-203ENST00000457183 MT1HP80294 61 aa4.49□□□□□ -1.69
THBS3-203ENST00000457183 M0R2T5 61 aa4.48□□□□□ -1.69
THBS3-203ENST00000457183 FLGP20930 4061 aaPredicted RBP4.47□□□□□ -1.69
THBS3-203ENST00000457183 KRTAP9-2Q9BYQ4 174 aa4.47□□□□□ -1.69
THBS3-203ENST00000457183 PP632Q6XCG6 107 aa4.39□□□□□ -1.71
THBS3-203ENST00000457183 KRTAP9-6A0A140TA67 174 aa4.3□□□□□ -1.72
THBS3-203ENST00000457183 PRO2289Q9P1D8 64 aa4.29□□□□□ -1.72
THBS3-203ENST00000457183 KRTAP9-8Q9BYQ0 159 aa4.26□□□□□ -1.73
THBS3-203ENST00000457183 MT2AP02795 61 aa4.23□□□□□ -1.73
THBS3-203ENST00000457183 CRCT1Q9UGL9 99 aa4.23□□□□□ -1.73
THBS3-203ENST00000457183 TNP1P09430 55 aa4.23□□□□□ -1.73
THBS3-203ENST00000457183 FSIP2Q5CZC0 6907 aa4.22□□□□□ -1.73
THBS3-203ENST00000457183 KRTAP10-10P60014 251 aa4.2□□□□□ -1.74
THBS3-203ENST00000457183 MT1FP04733 61 aa4.2□□□□□ -1.74
THBS3-203ENST00000457183 SPRR5A0A1B0GTR4 108 aa4.17□□□□□ -1.74
THBS3-203ENST00000457183 SPRR2GQ9BYE4 73 aa4.16□□□□□ -1.74
THBS3-203ENST00000457183 KRTAP19-1Q8IUB9 90 aa4.12□□□□□ -1.75
THBS3-203ENST00000457183 KRTAP9-3Q9BYQ3 159 aa4.11□□□□□ -1.75
THBS3-203ENST00000457183 KRTAP19-8Q3LI54 63 aa4.06□□□□□ -1.76
THBS3-203ENST00000457183 USH2AO75445 5202 aa4.04□□□□□ -1.76
THBS3-203ENST00000457183 SSPOA2VEC9 5147 aa4□□□□□ -1.77
THBS3-203ENST00000457183 LCE3AQ5TA76 89 aa4□□□□□ -1.77
THBS3-203ENST00000457183 INE1O15225 51 aa3.98□□□□□ -1.77
THBS3-203ENST00000457183 MT1BP07438 61 aa3.97□□□□□ -1.77
THBS3-203ENST00000457183 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.93□□□□□ -1.78
THBS3-203ENST00000457183 KRTAP19-6Q3LI70 58 aa3.92□□□□□ -1.78
THBS3-203ENST00000457183 FCGBPQ9Y6R7 5405 aaPredicted RBP3.89□□□□□ -1.79
THBS3-203ENST00000457183 KRTAP8-1Q8IUC2 63 aa3.88□□□□□ -1.79
THBS3-203ENST00000457183 KRTAP9-7A8MTY7 169 aa3.88□□□□□ -1.79
THBS3-203ENST00000457183 KRTAP10-5P60370 271 aa3.83□□□□□ -1.8
THBS3-203ENST00000457183 MT1XP80297 61 aa3.83□□□□□ -1.8
THBS3-203ENST00000457183 KRTAP12-3P60328 96 aa3.8□□□□□ -1.8
THBS3-203ENST00000457183 MACF1Q9UPN3 7388 aaKnown RBP3.77□□□□□ -1.81
THBS3-203ENST00000457183 KRTAP10-12P60413 245 aa3.77□□□□□ -1.81
THBS3-203ENST00000457183 KRTAP10-7P60409 375 aaPredicted RBP3.72□□□□□ -1.81
THBS3-203ENST00000457183 SYNE2Q8WXH0 6885 aaKnown RBP3.71□□□□□ -1.81
THBS3-203ENST00000457183 KRTAP6-3Q3LI67 103 aa3.69□□□□□ -1.82
THBS3-203ENST00000457183 KMT2DO14686 5537 aa3.61□□□□□ -1.83
THBS3-203ENST00000457183 KRTAP19-5Q3LI72 72 aa3.58□□□□□ -1.84
THBS3-203ENST00000457183 LCE3CQ5T5A8 94 aa3.58□□□□□ -1.84
THBS3-203ENST00000457183 KRTAP5-9P26371 169 aa3.53□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms