RNA–Protein interactions for RNA: ENST00000456932.6

CSPG4P10-201, Transcript of chondroitin sulfate proteoglycan 4 pseudogene 10, humanhuman

BASIC

Gene CSPG4P10, Length 4,817 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P10-201ENST00000456932 KRTAP12-2P59991 146 aa5.61□□□□□ -1.51
CSPG4P10-201ENST00000456932 DNAH5Q8TE73 4624 aa5.6□□□□□ -1.51
CSPG4P10-201ENST00000456932 DYNC2H1Q8NCM8 4307 aaKnown RBP5.57□□□□□ -1.52
CSPG4P10-201ENST00000456932 MT1HL1P0DM35 61 aa5.57□□□□□ -1.52
CSPG4P10-201ENST00000456932 DNAH2Q9P225 4427 aa5.57□□□□□ -1.52
CSPG4P10-201ENST00000456932 PRO2289Q9P1D8 64 aa5.56□□□□□ -1.52
CSPG4P10-201ENST00000456932 DNAH8Q96JB1 4490 aa5.55□□□□□ -1.52
CSPG4P10-201ENST00000456932 KMT2AQ03164 3969 aa5.54□□□□□ -1.52
CSPG4P10-201ENST00000456932 LYSTQ99698 3801 aa5.52□□□□□ -1.53
CSPG4P10-201ENST00000456932 KRTAP12-1P59990 96 aa5.5□□□□□ -1.53
CSPG4P10-201ENST00000456932 LRP1BQ9NZR2 4599 aa5.49□□□□□ -1.53
CSPG4P10-201ENST00000456932 DYNC1H1Q14204 4646 aaKnown RBP5.47□□□□□ -1.53
CSPG4P10-201ENST00000456932 KRTAP15-1Q3LI76 137 aa5.47□□□□□ -1.53
CSPG4P10-201ENST00000456932 KRTAP10-6P60371 365 aaPredicted RBP5.46□□□□□ -1.53
CSPG4P10-201ENST00000456932 DNAH7Q8WXX0 4024 aa5.46□□□□□ -1.54
CSPG4P10-201ENST00000456932 KRTAP13-4Q3LI77 160 aa5.45□□□□□ -1.54
CSPG4P10-201ENST00000456932 KRTAP4-5Q9BYR2 181 aa5.45□□□□□ -1.54
CSPG4P10-201ENST00000456932 KRTAP3-3Q9BYR6 98 aa5.42□□□□□ -1.54
CSPG4P10-201ENST00000456932 HECTD4Q9Y4D8 3996 aa5.41□□□□□ -1.54
CSPG4P10-201ENST00000456932 FAT1Q14517 4588 aa5.4□□□□□ -1.54
CSPG4P10-201ENST00000456932 DNAH6Q9C0G6 4158 aa5.38□□□□□ -1.55
CSPG4P10-201ENST00000456932 KRTAP3-2Q9BYR7 98 aa5.36□□□□□ -1.55
CSPG4P10-201ENST00000456932 FAT2Q9NYQ8 4349 aa5.34□□□□□ -1.55
CSPG4P10-201ENST00000456932 FRAS1Q86XX4 4008 aa5.34□□□□□ -1.55
CSPG4P10-201ENST00000456932 SACSQ9NZJ4 4579 aa5.34□□□□□ -1.55
CSPG4P10-201ENST00000456932 VPS13BQ7Z7G8 4022 aa5.33□□□□□ -1.56
CSPG4P10-201ENST00000456932 KIAA1109Q2LD37 5005 aa5.32□□□□□ -1.56
CSPG4P10-201ENST00000456932 INE1O15225 51 aa5.29□□□□□ -1.56
CSPG4P10-201ENST00000456932 RYR1P21817 5038 aa5.25□□□□□ -1.57
CSPG4P10-201ENST00000456932 HYDINQ4G0P3 5121 aa5.25□□□□□ -1.57
CSPG4P10-201ENST00000456932 RYR3Q15413 4870 aa5.24□□□□□ -1.57
CSPG4P10-201ENST00000456932 KMT2CQ8NEZ4 4911 aaKnown RBP5.2□□□□□ -1.58
CSPG4P10-201ENST00000456932 APOBP04114 4563 aaKnown RBP5.17□□□□□ -1.58
CSPG4P10-201ENST00000456932 RYR2Q92736 4967 aa5.15□□□□□ -1.58
CSPG4P10-201ENST00000456932 PKD1P98161 4303 aa5.12□□□□□ -1.59
CSPG4P10-201ENST00000456932 PKHD1P08F94 4074 aa5.11□□□□□ -1.59
CSPG4P10-201ENST00000456932 KRTAP17-1Q9BYP8 105 aa5.11□□□□□ -1.59
CSPG4P10-201ENST00000456932 KRTAP23-1A1A580 65 aa5.1□□□□□ -1.59
CSPG4P10-201ENST00000456932 LRP1Q07954 4544 aaKnown RBP5.09□□□□□ -1.6
CSPG4P10-201ENST00000456932 MYCBP2O75592 4640 aa5.06□□□□□ -1.6
CSPG4P10-201ENST00000456932 KRTAP4-1Q9BYQ7 146 aa5.04□□□□□ -1.6
CSPG4P10-201ENST00000456932 LORP23490 312 aaPredicted RBP5.03□□□□□ -1.6
CSPG4P10-201ENST00000456932 FAT3Q8TDW7 4589 aa5.02□□□□□ -1.61
CSPG4P10-201ENST00000456932 HERC2O95714 4834 aa4.98□□□□□ -1.61
CSPG4P10-201ENST00000456932 HSPG2P98160 4391 aa4.96□□□□□ -1.62
CSPG4P10-201ENST00000456932 EPPK1P58107 5090 aaKnown RBP4.95□□□□□ -1.62
CSPG4P10-201ENST00000456932 BIRC6Q9NR09 4857 aa4.89□□□□□ -1.63
CSPG4P10-201ENST00000456932 PKHD1L1Q86WI1 4243 aa4.88□□□□□ -1.63
CSPG4P10-201ENST00000456932 KRTAP10-12P60413 245 aa4.83□□□□□ -1.64
CSPG4P10-201ENST00000456932 LRP2P98164 4655 aa4.81□□□□□ -1.64
CSPG4P10-201ENST00000456932 TNXBP22105 4242 aa4.8□□□□□ -1.64
CSPG4P10-201ENST00000456932 KRTAP12-3P60328 96 aa4.77□□□□□ -1.65
CSPG4P10-201ENST00000456932 ABCA13Q86UQ4 5058 aa4.77□□□□□ -1.65
CSPG4P10-201ENST00000456932 MT1HP80294 61 aa4.74□□□□□ -1.65
CSPG4P10-201ENST00000456932 LCE3AQ5TA76 89 aa4.71□□□□□ -1.66
CSPG4P10-201ENST00000456932 LPAP08519 4548 aa4.68□□□□□ -1.66
CSPG4P10-201ENST00000456932 SPRR2GQ9BYE4 73 aa4.68□□□□□ -1.66
CSPG4P10-201ENST00000456932 MT2AP02795 61 aa4.66□□□□□ -1.66
CSPG4P10-201ENST00000456932 CRCT1Q9UGL9 99 aa4.62□□□□□ -1.67
CSPG4P10-201ENST00000456932 MT1FP04733 61 aa4.62□□□□□ -1.67
CSPG4P10-201ENST00000456932 PCLOQ9Y6V0 5065 aa4.61□□□□□ -1.67
CSPG4P10-201ENST00000456932 HERC1Q15751 4861 aa4.6□□□□□ -1.67
CSPG4P10-201ENST00000456932 KRTAP8-1Q8IUC2 63 aa4.6□□□□□ -1.67
CSPG4P10-201ENST00000456932 KRTAP19-2Q3LHN2 52 aa4.55□□□□□ -1.68
CSPG4P10-201ENST00000456932 KRTAP19-1Q8IUB9 90 aa4.53□□□□□ -1.68
CSPG4P10-201ENST00000456932 LCE2CQ5TA81 110 aa4.52□□□□□ -1.69
CSPG4P10-201ENST00000456932 KRTAP10-5P60370 271 aa4.5□□□□□ -1.69
CSPG4P10-201ENST00000456932 RNF213Q63HN8 5207 aa4.47□□□□□ -1.69
CSPG4P10-201ENST00000456932 UBR4Q5T4S7 5183 aa4.44□□□□□ -1.7
CSPG4P10-201ENST00000456932 KRTAP19-8Q3LI54 63 aa4.43□□□□□ -1.7
CSPG4P10-201ENST00000456932 MUC17Q685J3 4493 aa4.41□□□□□ -1.7
CSPG4P10-201ENST00000456932 KRTAP9-8Q9BYQ0 159 aa4.41□□□□□ -1.7
CSPG4P10-201ENST00000456932 MUC2Q02817 5179 aa4.4□□□□□ -1.71
CSPG4P10-201ENST00000456932 FLGP20930 4061 aaPredicted RBP4.39□□□□□ -1.71
CSPG4P10-201ENST00000456932 MT1BP07438 61 aa4.34□□□□□ -1.72
CSPG4P10-201ENST00000456932 SPRR2FQ96RM1 72 aa4.32□□□□□ -1.72
CSPG4P10-201ENST00000456932 FSIP2Q5CZC0 6907 aa4.32□□□□□ -1.72
CSPG4P10-201ENST00000456932 HMCN2Q8NDA2 5059 aa4.32□□□□□ -1.72
CSPG4P10-201ENST00000456932 MT1XP80297 61 aa4.31□□□□□ -1.72
CSPG4P10-201ENST00000456932 FAT4Q6V0I7 4981 aa4.29□□□□□ -1.72
CSPG4P10-201ENST00000456932 KRTAP10-7P60409 375 aaPredicted RBP4.27□□□□□ -1.73
CSPG4P10-201ENST00000456932 KRTAP19-4Q3LI73 84 aa4.27□□□□□ -1.73
CSPG4P10-201ENST00000456932 KRTAP9-3Q9BYQ3 159 aa4.26□□□□□ -1.73
CSPG4P10-201ENST00000456932 KRTAP19-5Q3LI72 72 aa4.24□□□□□ -1.73
CSPG4P10-201ENST00000456932 SPRR5A0A1B0GTR4 108 aa4.15□□□□□ -1.75
CSPG4P10-201ENST00000456932 LCE3CQ5T5A8 94 aa4.14□□□□□ -1.75
CSPG4P10-201ENST00000456932 LCE2BO14633 110 aa4.1□□□□□ -1.75
CSPG4P10-201ENST00000456932 SPRR2EP22531 72 aa4.09□□□□□ -1.75
CSPG4P10-201ENST00000456932 SPRR2BP35325 72 aa4.09□□□□□ -1.75
CSPG4P10-201ENST00000456932 SPRR2AP35326 72 aa4.09□□□□□ -1.75
CSPG4P10-201ENST00000456932 KRTAP4-8A0A0G2JLE6 195 aa4.04□□□□□ -1.76
CSPG4P10-201ENST00000456932 KRTAP4-8Q9BYQ9 185 aa4.04□□□□□ -1.76
CSPG4P10-201ENST00000456932 KRTAP12-4P60329 112 aa3.99□□□□□ -1.77
CSPG4P10-201ENST00000456932 SPRR2DP22532 72 aa3.97□□□□□ -1.77
CSPG4P10-201ENST00000456932 LCE2AQ5TA79 106 aaPredicted RBP3.96□□□□□ -1.78
CSPG4P10-201ENST00000456932 SYNE1Q8NF91 8797 aaKnown RBP3.96□□□□□ -1.78
CSPG4P10-201ENST00000456932 KRTAP9-2Q9BYQ4 174 aa3.92□□□□□ -1.78
CSPG4P10-201ENST00000456932 MT1GP13640 62 aa3.87□□□□□ -1.79
CSPG4P10-201ENST00000456932 USH2AO75445 5202 aa3.84□□□□□ -1.8
CSPG4P10-201ENST00000456932 LCE3BQ5TA77 95 aa3.82□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms