RNA–Protein interactions for RNA: ENST00000456210.5

SEMA3B-208, Transcript of semaphorin 3B, humanhuman

TSL 2

Gene SEMA3B, Length 2,065 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-208ENST00000456210 BIRC6Q9NR09 4857 aa10.04□□□□□ -0.8
SEMA3B-208ENST00000456210 C9orf92A6NGG3 77 aa10.04□□□□□ -0.8
SEMA3B-208ENST00000456210 COX6B2Q6YFQ2 88 aa10.03□□□□□ -0.8
SEMA3B-208ENST00000456210 PKHD1L1Q86WI1 4243 aa9.94□□□□□ -0.82
SEMA3B-208ENST00000456210 KRTAP10-4P60372 401 aaPredicted RBP9.93□□□□□ -0.82
SEMA3B-208ENST00000456210 Q5VSD8 79 aa9.89□□□□□ -0.83
SEMA3B-208ENST00000456210 KRTAP4-5Q9BYR2 181 aa9.89□□□□□ -0.83
SEMA3B-208ENST00000456210 CRIPTQ9P021 101 aa9.89□□□□□ -0.83
SEMA3B-208ENST00000456210 HERC2O95714 4834 aa9.84□□□□□ -0.83
SEMA3B-208ENST00000456210 RPL37P61927 97 aaKnown RBP9.84□□□□□ -0.83
SEMA3B-208ENST00000456210 KRTAP10-6P60371 365 aaPredicted RBP9.83□□□□□ -0.84
SEMA3B-208ENST00000456210 FLG2Q5D862 2391 aaPredicted RBP9.82□□□□□ -0.84
SEMA3B-208ENST00000456210 MYCBP2O75592 4640 aa9.8□□□□□ -0.84
SEMA3B-208ENST00000456210 P0C880 135 aa9.8□□□□□ -0.84
SEMA3B-208ENST00000456210 ABCA13Q86UQ4 5058 aa9.79□□□□□ -0.84
SEMA3B-208ENST00000456210 LRP1Q07954 4544 aaKnown RBP9.79□□□□□ -0.84
SEMA3B-208ENST00000456210 KRTAP3-3Q9BYR6 98 aa9.76□□□□□ -0.85
SEMA3B-208ENST00000456210 KRTAP13-4Q3LI77 160 aa9.75□□□□□ -0.85
SEMA3B-208ENST00000456210 KRTAP3-2Q9BYR7 98 aa9.72□□□□□ -0.85
SEMA3B-208ENST00000456210 PCLOQ9Y6V0 5065 aa9.71□□□□□ -0.86
SEMA3B-208ENST00000456210 TPRXLQ17RH7 258 aa9.7□□□□□ -0.86
SEMA3B-208ENST00000456210 A0A0D9SG42 100 aa9.65□□□□□ -0.87
SEMA3B-208ENST00000456210 FAT3Q8TDW7 4589 aa9.62□□□□□ -0.87
SEMA3B-208ENST00000456210 S4R3F8 94 aa9.6□□□□□ -0.87
SEMA3B-208ENST00000456210 SPINT4Q6UDR6 99 aa9.59□□□□□ -0.87
SEMA3B-208ENST00000456210 KRTAP10-8P60410 259 aa9.56□□□□□ -0.88
SEMA3B-208ENST00000456210 TNXBP22105 4242 aa9.53□□□□□ -0.88
SEMA3B-208ENST00000456210 C10orf95Q9H7T3 257 aa9.53□□□□□ -0.88
SEMA3B-208ENST00000456210 KRTAP15-1Q3LI76 137 aa9.5□□□□□ -0.89
SEMA3B-208ENST00000456210 DMBT1Q9UGM3 2413 aaPredicted RBP9.48□□□□□ -0.89
SEMA3B-208ENST00000456210 KRTAP12-2P59991 146 aa9.47□□□□□ -0.89
SEMA3B-208ENST00000456210 MT1HL1P0DM35 61 aa9.45□□□□□ -0.9
SEMA3B-208ENST00000456210 XP32Q5T750 250 aa9.41□□□□□ -0.9
SEMA3B-208ENST00000456210 KRTAP12-1P59990 96 aa9.41□□□□□ -0.9
SEMA3B-208ENST00000456210 HERC1Q15751 4861 aa9.38□□□□□ -0.91
SEMA3B-208ENST00000456210 J3QL48 77 aa9.36□□□□□ -0.91
SEMA3B-208ENST00000456210 NDUFAF8A1L188 74 aa9.33□□□□□ -0.92
SEMA3B-208ENST00000456210 M0QZ58 72 aa9.28□□□□□ -0.92
SEMA3B-208ENST00000456210 LPAP08519 4548 aa9.14□□□□□ -0.95
SEMA3B-208ENST00000456210 HMCN2Q8NDA2 5059 aa9.04□□□□□ -0.96
SEMA3B-208ENST00000456210 LRP2P98164 4655 aa9.02□□□□□ -0.97
SEMA3B-208ENST00000456210 R4GN34 69 aa8.9□□□□□ -0.99
SEMA3B-208ENST00000456210 PLAC4Q8WY50 150 aa8.85□□□□□ -0.99
SEMA3B-208ENST00000456210 UBR4Q5T4S7 5183 aa8.85□□□□□ -0.99
SEMA3B-208ENST00000456210 MUC2Q02817 5179 aa8.77□□□□□ -1.01
SEMA3B-208ENST00000456210 SEC61BP60468 96 aaKnown RBP8.76□□□□□ -1.01
SEMA3B-208ENST00000456210 RNF213Q63HN8 5207 aa8.73□□□□□ -1.01
SEMA3B-208ENST00000456210 LORP23490 312 aaPredicted RBP8.71□□□□□ -1.02
SEMA3B-208ENST00000456210 PP632Q6XCG6 107 aa8.68□□□□□ -1.02
SEMA3B-208ENST00000456210 MUC17Q685J3 4493 aa8.56□□□□□ -1.04
SEMA3B-208ENST00000456210 LUZP6Q538Z0 58 aa8.53□□□□□ -1.04
SEMA3B-208ENST00000456210 KRTAP4-1Q9BYQ7 146 aa8.53□□□□□ -1.04
SEMA3B-208ENST00000456210 CAMK2N1Q7Z7J9 78 aa8.48□□□□□ -1.05
SEMA3B-208ENST00000456210 KRTAP19-2Q3LHN2 52 aa8.41□□□□□ -1.06
SEMA3B-208ENST00000456210 A0A0A0MQY5 61 aa8.38□□□□□ -1.07
SEMA3B-208ENST00000456210 FAT4Q6V0I7 4981 aa8.38□□□□□ -1.07
SEMA3B-208ENST00000456210 KRTAP23-1A1A580 65 aa8.35□□□□□ -1.07
SEMA3B-208ENST00000456210 SPRR5A0A1B0GTR4 108 aa8.28□□□□□ -1.08
SEMA3B-208ENST00000456210 TNP1P09430 55 aa8.26□□□□□ -1.09
SEMA3B-208ENST00000456210 FLGP20930 4061 aaPredicted RBP8.15□□□□□ -1.1
SEMA3B-208ENST00000456210 LCE2CQ5TA81 110 aa8.15□□□□□ -1.11
SEMA3B-208ENST00000456210 MT1HP80294 61 aa7.99□□□□□ -1.13
SEMA3B-208ENST00000456210 LCE2AQ5TA79 106 aaPredicted RBP7.94□□□□□ -1.14
SEMA3B-208ENST00000456210 M0R2T5 61 aa7.9□□□□□ -1.15
SEMA3B-208ENST00000456210 SPRR2GQ9BYE4 73 aa7.87□□□□□ -1.15
SEMA3B-208ENST00000456210 KRTAP19-1Q8IUB9 90 aa7.78□□□□□ -1.16
SEMA3B-208ENST00000456210 LCE3AQ5TA76 89 aa7.77□□□□□ -1.17
SEMA3B-208ENST00000456210 PRO2289Q9P1D8 64 aa7.67□□□□□ -1.18
SEMA3B-208ENST00000456210 KRTAP9-8Q9BYQ0 159 aa7.65□□□□□ -1.18
SEMA3B-208ENST00000456210 KRTAP8-1Q8IUC2 63 aa7.63□□□□□ -1.19
SEMA3B-208ENST00000456210 MT2AP02795 61 aa7.61□□□□□ -1.19
SEMA3B-208ENST00000456210 KRTAP10-10P60014 251 aa7.59□□□□□ -1.19
SEMA3B-208ENST00000456210 INE1O15225 51 aa7.59□□□□□ -1.19
SEMA3B-208ENST00000456210 MT1FP04733 61 aa7.58□□□□□ -1.2
SEMA3B-208ENST00000456210 KRTAP19-8Q3LI54 63 aa7.47□□□□□ -1.21
SEMA3B-208ENST00000456210 FSIP2Q5CZC0 6907 aa7.42□□□□□ -1.22
SEMA3B-208ENST00000456210 KRTAP10-5P60370 271 aa7.39□□□□□ -1.23
SEMA3B-208ENST00000456210 KRTAP12-3P60328 96 aa7.39□□□□□ -1.23
SEMA3B-208ENST00000456210 KRTAP9-3Q9BYQ3 159 aa7.37□□□□□ -1.23
SEMA3B-208ENST00000456210 MT1XP80297 61 aa7.36□□□□□ -1.23
SEMA3B-208ENST00000456210 USH2AO75445 5202 aa7.35□□□□□ -1.23
SEMA3B-208ENST00000456210 KRTAP10-12P60413 245 aa7.34□□□□□ -1.23
SEMA3B-208ENST00000456210 MT1BP07438 61 aa7.32□□□□□ -1.24
SEMA3B-208ENST00000456210 KRTAP9-2Q9BYQ4 174 aa7.31□□□□□ -1.24
SEMA3B-208ENST00000456210 LCE2BO14633 110 aa7.28□□□□□ -1.24
SEMA3B-208ENST00000456210 LCE2DQ5TA82 110 aaPredicted RBP7.26□□□□□ -1.25
SEMA3B-208ENST00000456210 KRTAP10-7P60409 375 aaPredicted RBP7.16□□□□□ -1.26
SEMA3B-208ENST00000456210 SSPOA2VEC9 5147 aa7.11□□□□□ -1.27
SEMA3B-208ENST00000456210 LCE3CQ5T5A8 94 aa6.99□□□□□ -1.29
SEMA3B-208ENST00000456210 CRCT1Q9UGL9 99 aa6.96□□□□□ -1.29
SEMA3B-208ENST00000456210 KRTAP19-5Q3LI72 72 aa6.94□□□□□ -1.3
SEMA3B-208ENST00000456210 KRTAP9-6A0A140TA67 174 aa6.85□□□□□ -1.31
SEMA3B-208ENST00000456210 FCGBPQ9Y6R7 5405 aaPredicted RBP6.85□□□□□ -1.31
SEMA3B-208ENST00000456210 KRTAP19-6Q3LI70 58 aa6.83□□□□□ -1.32
SEMA3B-208ENST00000456210 KRTAP9-6A8MVA2 160 aa6.76□□□□□ -1.33
SEMA3B-208ENST00000456210 KRTAP2-3P0C7H8 128 aa6.72□□□□□ -1.33
SEMA3B-208ENST00000456210 KRTAP2-4Q9BYR9 128 aa6.72□□□□□ -1.33
SEMA3B-208ENST00000456210 KRTAP2-1Q9BYU5 128 aa6.72□□□□□ -1.33
SEMA3B-208ENST00000456210 KMT2DO14686 5537 aa6.61□□□□□ -1.35
SEMA3B-208ENST00000456210 KRTAP4-8A0A0G2JLE6 195 aa6.59□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 93.8 ms