RNA–Protein interactions for RNA: ENST00000455111.1

GPC1-206, Transcript of glypican 1, humanhuman

TSL 3

Gene GPC1, Length 841 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-206ENST00000455111 UBL5Q9BZL1 73 aa7□□□□□ -1.29
GPC1-206ENST00000455111 KRTAP20-1Q3LI63 56 aa6.97□□□□□ -1.29
GPC1-206ENST00000455111 J3QR89 54 aa6.94□□□□□ -1.3
GPC1-206ENST00000455111 ACYP1P07311 99 aa6.94□□□□□ -1.3
GPC1-206ENST00000455111 CYP4F30PQ9H0H9 118 aa6.94□□□□□ -1.3
GPC1-206ENST00000455111 FAM240AA0A1B0GVK7 77 aa6.93□□□□□ -1.3
GPC1-206ENST00000455111 TP53AIP1Q9HCN2 124 aa6.93□□□□□ -1.3
GPC1-206ENST00000455111 K7ERU9 68 aa6.9□□□□□ -1.3
GPC1-206ENST00000455111 CRIPTQ9P021 101 aa6.85□□□□□ -1.31
GPC1-206ENST00000455111 TRAV22A0A0B4J277 110 aa6.8□□□□□ -1.32
GPC1-206ENST00000455111 MT1XP80297 61 aa6.8□□□□□ -1.32
GPC1-206ENST00000455111 LOC101927531A0A1B0GV80 90 aa6.78□□□□□ -1.32
GPC1-206ENST00000455111 H0YAA0 97 aa6.78□□□□□ -1.32
GPC1-206ENST00000455111 IMUPQ9GZP8 106 aa6.78□□□□□ -1.32
GPC1-206ENST00000455111 ATP5EP2Q5VTU8 51 aa6.76□□□□□ -1.33
GPC1-206ENST00000455111 LINC00643Q86TS7 51 aa6.76□□□□□ -1.33
GPC1-206ENST00000455111 KRTAP2-3P0C7H8 128 aa6.73□□□□□ -1.33
GPC1-206ENST00000455111 SPRR2FQ96RM1 72 aa6.73□□□□□ -1.33
GPC1-206ENST00000455111 KRTAP2-4Q9BYR9 128 aa6.73□□□□□ -1.33
GPC1-206ENST00000455111 ADM2Q7Z4H4 148 aa6.71□□□□□ -1.34
GPC1-206ENST00000455111 NDUFC1O43677 76 aa6.69□□□□□ -1.34
GPC1-206ENST00000455111 H0Y9P7 68 aa6.68□□□□□ -1.34
GPC1-206ENST00000455111 SPRR2EP22531 72 aa6.68□□□□□ -1.34
GPC1-206ENST00000455111 SPRR2BP35325 72 aa6.68□□□□□ -1.34
GPC1-206ENST00000455111 SPRR2AP35326 72 aa6.68□□□□□ -1.34
GPC1-206ENST00000455111 MT-ATP8P03928 68 aa6.66□□□□□ -1.34
GPC1-206ENST00000455111 A8MUN3 132 aa6.65□□□□□ -1.34
GPC1-206ENST00000455111 UQCRQO14949 82 aa6.65□□□□□ -1.34
GPC1-206ENST00000455111 LCE1AQ5T7P2 110 aa6.64□□□□□ -1.35
GPC1-206ENST00000455111 KRTAP4-8A0A0G2JLE6 195 aa6.62□□□□□ -1.35
GPC1-206ENST00000455111 KRTAP4-8Q9BYQ9 185 aa6.62□□□□□ -1.35
GPC1-206ENST00000455111 P0C880 135 aa6.61□□□□□ -1.35
GPC1-206ENST00000455111 KRTAP12-2P59991 146 aa6.61□□□□□ -1.35
GPC1-206ENST00000455111 HIST1H4AP62805 103 aaKnown RBP6.6□□□□□ -1.35
GPC1-206ENST00000455111 KRTAP8-1Q8IUC2 63 aa6.6□□□□□ -1.35
GPC1-206ENST00000455111 ATOX1O00244 68 aa6.59□□□□□ -1.35
GPC1-206ENST00000455111 PRO2289Q9P1D8 64 aa6.59□□□□□ -1.35
GPC1-206ENST00000455111 KRTAP3-2Q9BYR7 98 aa6.56□□□□□ -1.36
GPC1-206ENST00000455111 LINC00208Q96KT6 92 aa6.55□□□□□ -1.36
GPC1-206ENST00000455111 PLAC4Q8WY50 150 aa6.53□□□□□ -1.36
GPC1-206ENST00000455111 OCR1Q9BZK8 76 aa6.52□□□□□ -1.37
GPC1-206ENST00000455111 SCGB1A1P11684 91 aa6.5□□□□□ -1.37
GPC1-206ENST00000455111 KRTAP10-7P60409 375 aaPredicted RBP6.5□□□□□ -1.37
GPC1-206ENST00000455111 KRTAP2-2Q9BYT5 123 aa6.5□□□□□ -1.37
GPC1-206ENST00000455111 KRTAP2-1Q9BYU5 128 aa6.5□□□□□ -1.37
GPC1-206ENST00000455111 R4GN34 69 aa6.48□□□□□ -1.37
GPC1-206ENST00000455111 M0QZ58 72 aa6.47□□□□□ -1.37
GPC1-206ENST00000455111 SPRR2DP22532 72 aa6.45□□□□□ -1.38
GPC1-206ENST00000455111 SMIM20Q8N5G0 67 aa6.44□□□□□ -1.38
GPC1-206ENST00000455111 KRTAP10-12P60413 245 aa6.42□□□□□ -1.38
GPC1-206ENST00000455111 DMAC1Q96GE9 116 aa6.41□□□□□ -1.38
GPC1-206ENST00000455111 MP68P56378 58 aa6.39□□□□□ -1.39
GPC1-206ENST00000455111 LINC01554Q52M75 96 aa6.37□□□□□ -1.39
GPC1-206ENST00000455111 TRAV7A0A075B6U4 112 aa6.35□□□□□ -1.39
GPC1-206ENST00000455111 C20orf197Q8N268 126 aa6.34□□□□□ -1.39
GPC1-206ENST00000455111 H3BPC8 53 aa6.32□□□□□ -1.4
GPC1-206ENST00000455111 LCE3BQ5TA77 95 aa6.32□□□□□ -1.4
GPC1-206ENST00000455111 ANAPC13Q9BS18 74 aa6.32□□□□□ -1.4
GPC1-206ENST00000455111 PCP4P48539 62 aa6.31□□□□□ -1.4
GPC1-206ENST00000455111 SERP2Q8N6R1 65 aa6.31□□□□□ -1.4
GPC1-206ENST00000455111 COX7CP15954 63 aa6.27□□□□□ -1.41
GPC1-206ENST00000455111 CCDC179H3BU77 68 aa6.22□□□□□ -1.41
GPC1-206ENST00000455111 KRTAP13-4Q3LI77 160 aa6.14□□□□□ -1.43
GPC1-206ENST00000455111 SNURFQ9Y675 71 aa6.13□□□□□ -1.43
GPC1-206ENST00000455111 CYSTM1Q9H1C7 97 aa6.12□□□□□ -1.43
GPC1-206ENST00000455111 ACYP2P14621 99 aa6.11□□□□□ -1.43
GPC1-206ENST00000455111 KRTAP19-7Q3SYF9 63 aa6.11□□□□□ -1.43
GPC1-206ENST00000455111 SPANXA2-OT1Q8N9U9 137 aa6.07□□□□□ -1.44
GPC1-206ENST00000455111 LCE5AQ5TCM9 118 aa6.06□□□□□ -1.44
GPC1-206ENST00000455111 DSTQ03001 7570 aaKnown RBP6.05□□□□□ -1.44
GPC1-206ENST00000455111 H7BZZ5 65 aa6.05□□□□□ -1.44
GPC1-206ENST00000455111 MT1EP04732 61 aa6.02□□□□□ -1.45
GPC1-206ENST00000455111 KRTAP4-9Q9BYQ8 210 aa6□□□□□ -1.45
GPC1-206ENST00000455111 GPR98Q8WXG9 6306 aa6□□□□□ -1.45
GPC1-206ENST00000455111 SPTSSBQ8NFR3 76 aa5.99□□□□□ -1.45
GPC1-206ENST00000455111 KRTAP19-3Q7Z4W3 81 aa5.98□□□□□ -1.45
GPC1-206ENST00000455111 TMEM258P61165 79 aa5.96□□□□□ -1.46
GPC1-206ENST00000455111 CHKB-CPT1BH3BT56 60 aa5.95□□□□□ -1.46
GPC1-206ENST00000455111 ATP5EP56381 51 aaPredicted RBP5.94□□□□□ -1.46
GPC1-206ENST00000455111 CAMK2N1Q7Z7J9 78 aa5.89□□□□□ -1.47
GPC1-206ENST00000455111 KRTAP19-5Q3LI72 72 aa5.84□□□□□ -1.47
GPC1-206ENST00000455111 LCE1DQ5T752 114 aa5.82□□□□□ -1.48
GPC1-206ENST00000455111 SERP1Q9Y6X1 66 aa5.8□□□□□ -1.48
GPC1-206ENST00000455111 A0A0D9SG42 100 aa5.79□□□□□ -1.48
GPC1-206ENST00000455111 RPS28P62857 69 aaKnown RBP5.79□□□□□ -1.48
GPC1-206ENST00000455111 COA5Q86WW8 74 aa5.78□□□□□ -1.48
GPC1-206ENST00000455111 MT1GP13640 62 aa5.77□□□□□ -1.49
GPC1-206ENST00000455111 SPATA8Q6RVD6 105 aa5.77□□□□□ -1.49
GPC1-206ENST00000455111 MT1MQ8N339 61 aa5.75□□□□□ -1.49
GPC1-206ENST00000455111 HMCN1Q96RW7 5635 aa5.74□□□□□ -1.49
GPC1-206ENST00000455111 KRTAP12-1P59990 96 aa5.73□□□□□ -1.49
GPC1-206ENST00000455111 MT1LQ93083 61 aa5.72□□□□□ -1.49
GPC1-206ENST00000455111 KRTAP4-3Q9BYR4 195 aa5.7□□□□□ -1.5
GPC1-206ENST00000455111 MT4P47944 62 aa5.69□□□□□ -1.5
GPC1-206ENST00000455111 LCE4AQ5TA78 99 aa5.68□□□□□ -1.5
GPC1-206ENST00000455111 SPINT4Q6UDR6 99 aa5.68□□□□□ -1.5
GPC1-206ENST00000455111 SMIM26A0A096LP01 95 aa5.64□□□□□ -1.51
GPC1-206ENST00000455111 KRTAP5-4Q6L8H1 288 aa5.64□□□□□ -1.51
GPC1-206ENST00000455111 PP632Q6XCG6 107 aa5.63□□□□□ -1.51
GPC1-206ENST00000455111 AHNAK2Q8IVF2 5795 aa5.63□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms