RNA–Protein interactions for RNA: ENST00000454849.5

MSH2-203, Transcript of mutS homolog 2, humanhuman

TSL 4

Gene MSH2, Length 560 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH2-203ENST00000454849 KLKP1Q107X0 134 aa11.31□□□□□ -0.6
MSH2-203ENST00000454849 KRTAP9-7A8MTY7 169 aa11.26□□□□□ -0.61
MSH2-203ENST00000454849 MP68P56378 58 aa11.24□□□□□ -0.61
MSH2-203ENST00000454849 SCGB1A1P11684 91 aa11.17□□□□□ -0.62
MSH2-203ENST00000454849 NDUFC1O43677 76 aa11.16□□□□□ -0.62
MSH2-203ENST00000454849 SPRR2GQ9BYE4 73 aa11.14□□□□□ -0.63
MSH2-203ENST00000454849 MT1BP07438 61 aa11.12□□□□□ -0.63
MSH2-203ENST00000454849 A8MUN3 132 aa11.1□□□□□ -0.63
MSH2-203ENST00000454849 Q5VV11 94 aa11.09□□□□□ -0.63
MSH2-203ENST00000454849 MT-ATP8P03928 68 aa11.07□□□□□ -0.64
MSH2-203ENST00000454849 IMUPQ9GZP8 106 aa11.07□□□□□ -0.64
MSH2-203ENST00000454849 KRTAP19-8Q3LI54 63 aa11.06□□□□□ -0.64
MSH2-203ENST00000454849 MACF1Q9UPN3 7388 aaKnown RBP11.03□□□□□ -0.64
MSH2-203ENST00000454849 H3BPC8 53 aa11.03□□□□□ -0.64
MSH2-203ENST00000454849 ADM2Q7Z4H4 148 aa10.99□□□□□ -0.65
MSH2-203ENST00000454849 K7ERU9 68 aa10.98□□□□□ -0.65
MSH2-203ENST00000454849 CRIPTQ9P021 101 aa10.95□□□□□ -0.66
MSH2-203ENST00000454849 H0YAA0 97 aa10.94□□□□□ -0.66
MSH2-203ENST00000454849 A6NN06 94 aa10.93□□□□□ -0.66
MSH2-203ENST00000454849 SYNE2Q8WXH0 6885 aaKnown RBP10.91□□□□□ -0.66
MSH2-203ENST00000454849 DMAC1Q96GE9 116 aa10.9□□□□□ -0.66
MSH2-203ENST00000454849 TRAV7A0A075B6U4 112 aa10.83□□□□□ -0.68
MSH2-203ENST00000454849 KRTAP10-5P60370 271 aa10.8□□□□□ -0.68
MSH2-203ENST00000454849 P0C880 135 aa10.77□□□□□ -0.69
MSH2-203ENST00000454849 SMIM20Q8N5G0 67 aa10.77□□□□□ -0.69
MSH2-203ENST00000454849 KRTAP6-3Q3LI67 103 aa10.7□□□□□ -0.7
MSH2-203ENST00000454849 SNURFQ9Y675 71 aa10.7□□□□□ -0.7
MSH2-203ENST00000454849 ACYP2P14621 99 aa10.67□□□□□ -0.7
MSH2-203ENST00000454849 KRTAP3-2Q9BYR7 98 aa10.66□□□□□ -0.7
MSH2-203ENST00000454849 R4GN34 69 aa10.64□□□□□ -0.71
MSH2-203ENST00000454849 M0QZ58 72 aa10.6□□□□□ -0.71
MSH2-203ENST00000454849 C20orf197Q8N268 126 aa10.6□□□□□ -0.71
MSH2-203ENST00000454849 PLAC4Q8WY50 150 aa10.53□□□□□ -0.72
MSH2-203ENST00000454849 CHKB-CPT1BH3BT56 60 aa10.51□□□□□ -0.73
MSH2-203ENST00000454849 LINC01554Q52M75 96 aa10.51□□□□□ -0.73
MSH2-203ENST00000454849 SERP2Q8N6R1 65 aa10.51□□□□□ -0.73
MSH2-203ENST00000454849 SPTSSBQ8NFR3 76 aa10.47□□□□□ -0.73
MSH2-203ENST00000454849 MT1XP80297 61 aa10.46□□□□□ -0.73
MSH2-203ENST00000454849 SPANXA2-OT1Q8N9U9 137 aa10.39□□□□□ -0.75
MSH2-203ENST00000454849 PRO2289Q9P1D8 64 aa10.39□□□□□ -0.75
MSH2-203ENST00000454849 MUC12Q9UKN1 5478 aa10.24□□□□□ -0.77
MSH2-203ENST00000454849 KRTAP5-9P26371 169 aa10.23□□□□□ -0.77
MSH2-203ENST00000454849 NEBP20929 6669 aa10.22□□□□□ -0.77
MSH2-203ENST00000454849 COX7CP15954 63 aa10.21□□□□□ -0.77
MSH2-203ENST00000454849 KMT2DO14686 5537 aa10.19□□□□□ -0.78
MSH2-203ENST00000454849 COA5Q86WW8 74 aa10.19□□□□□ -0.78
MSH2-203ENST00000454849 CYSTM1Q9H1C7 97 aa10.16□□□□□ -0.78
MSH2-203ENST00000454849 KRTAP13-4Q3LI77 160 aa10.12□□□□□ -0.79
MSH2-203ENST00000454849 KRTAP12-2P59991 146 aa10.07□□□□□ -0.8
MSH2-203ENST00000454849 SPRR2FQ96RM1 72 aa10.07□□□□□ -0.8
MSH2-203ENST00000454849 H7BZZ5 65 aa10.05□□□□□ -0.8
MSH2-203ENST00000454849 KRTAP8-1Q8IUC2 63 aa10.05□□□□□ -0.8
MSH2-203ENST00000454849 KRTAP4-8A0A0G2JLE6 195 aa10.03□□□□□ -0.8
MSH2-203ENST00000454849 KRTAP4-8Q9BYQ9 185 aa10.03□□□□□ -0.8
MSH2-203ENST00000454849 KRTAP10-7P60409 375 aaPredicted RBP10.02□□□□□ -0.81
MSH2-203ENST00000454849 MDN1Q9NU22 5596 aa10.01□□□□□ -0.81
MSH2-203ENST00000454849 ANAPC13Q9BS18 74 aa9.95□□□□□ -0.82
MSH2-203ENST00000454849 SEC61GP60059 68 aa9.92□□□□□ -0.82
MSH2-203ENST00000454849 SERP1Q9Y6X1 66 aa9.91□□□□□ -0.82
MSH2-203ENST00000454849 SPRR2EP22531 72 aa9.89□□□□□ -0.83
MSH2-203ENST00000454849 SPRR2BP35325 72 aa9.89□□□□□ -0.83
MSH2-203ENST00000454849 SPRR2AP35326 72 aa9.89□□□□□ -0.83
MSH2-203ENST00000454849 KRTAP20-1Q3LI63 56 aa9.89□□□□□ -0.83
MSH2-203ENST00000454849 KRTAP10-12P60413 245 aa9.88□□□□□ -0.83
MSH2-203ENST00000454849 A0A0D9SG42 100 aa9.87□□□□□ -0.83
MSH2-203ENST00000454849 SPATA8Q6RVD6 105 aa9.84□□□□□ -0.83
MSH2-203ENST00000454849 CAMK2N1Q7Z7J9 78 aa9.83□□□□□ -0.84
MSH2-203ENST00000454849 CCDC179H3BU77 68 aa9.8□□□□□ -0.84
MSH2-203ENST00000454849 A0A1B0GU33 70 aa9.78□□□□□ -0.84
MSH2-203ENST00000454849 LCE1AQ5T7P2 110 aa9.75□□□□□ -0.85
MSH2-203ENST00000454849 SPINT4Q6UDR6 99 aa9.68□□□□□ -0.86
MSH2-203ENST00000454849 A0A1B0GU69 56 aa9.65□□□□□ -0.86
MSH2-203ENST00000454849 KRTAP2-3P0C7H8 128 aa9.64□□□□□ -0.87
MSH2-203ENST00000454849 KRTAP2-4Q9BYR9 128 aa9.64□□□□□ -0.87
MSH2-203ENST00000454849 KRTAP12-1P59990 96 aa9.58□□□□□ -0.88
MSH2-203ENST00000454849 SPRR2DP22532 72 aa9.55□□□□□ -0.88
MSH2-203ENST00000454849 A8MU10 97 aa9.52□□□□□ -0.89
MSH2-203ENST00000454849 ATP5EP56381 51 aaPredicted RBP9.47□□□□□ -0.89
MSH2-203ENST00000454849 SMIM26A0A096LP01 95 aa9.45□□□□□ -0.9
MSH2-203ENST00000454849 PRR15LQ9BU68 103 aa9.34□□□□□ -0.91
MSH2-203ENST00000454849 KRTAP2-2Q9BYT5 123 aa9.34□□□□□ -0.91
MSH2-203ENST00000454849 KRTAP2-1Q9BYU5 128 aa9.34□□□□□ -0.91
MSH2-203ENST00000454849 KRTAP19-7Q3SYF9 63 aa9.33□□□□□ -0.92
MSH2-203ENST00000454849 TMEM258P61165 79 aa9.31□□□□□ -0.92
MSH2-203ENST00000454849 LINC01558Q9Y6Z2 57 aa9.31□□□□□ -0.92
MSH2-203ENST00000454849 LCE3BQ5TA77 95 aa9.26□□□□□ -0.93
MSH2-203ENST00000454849 MT1EP04732 61 aa9.24□□□□□ -0.93
MSH2-203ENST00000454849 KRTAP19-5Q3LI72 72 aa9.19□□□□□ -0.94
MSH2-203ENST00000454849 C10orf95Q9H7T3 257 aa9.19□□□□□ -0.94
MSH2-203ENST00000454849 LCE5AQ5TCM9 118 aa9.12□□□□□ -0.95
MSH2-203ENST00000454849 KRTAP19-3Q7Z4W3 81 aa9.12□□□□□ -0.95
MSH2-203ENST00000454849 UQCR11O14957 56 aa9.05□□□□□ -0.96
MSH2-203ENST00000454849 TNP1P09430 55 aa9.05□□□□□ -0.96
MSH2-203ENST00000454849 LCE3AQ5TA76 89 aa9.03□□□□□ -0.96
MSH2-203ENST00000454849 MIR22HGQ0VDD5 57 aa8.9□□□□□ -0.98
MSH2-203ENST00000454849 MT1GP13640 62 aa8.89□□□□□ -0.99
MSH2-203ENST00000454849 DSTQ03001 7570 aaKnown RBP8.88□□□□□ -0.99
MSH2-203ENST00000454849 PSPHP1O15172 72 aa8.87□□□□□ -0.99
MSH2-203ENST00000454849 MT1LQ93083 61 aa8.87□□□□□ -0.99
MSH2-203ENST00000454849 MT1MQ8N339 61 aa8.8□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms