RNA–Protein interactions for RNA: ENST00000454193.5

CCDC142-203, Transcript of coiled-coil domain containing 142, humanhuman

TSL 2

Gene CCDC142, Length 2,309 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC142-203ENST00000454193 HSPG2P98160 4391 aa10.16□□□□□ -0.78
CCDC142-203ENST00000454193 KRTAP25-1Q3LHN0 102 aa10.13□□□□□ -0.79
CCDC142-203ENST00000454193 H1FX-AS1Q4G0G2 97 aa10.13□□□□□ -0.79
CCDC142-203ENST00000454193 RPL37P61927 97 aaKnown RBP10.11□□□□□ -0.79
CCDC142-203ENST00000454193 DMBT1Q9UGM3 2413 aaPredicted RBP10.11□□□□□ -0.79
CCDC142-203ENST00000454193 ROMO1P60602 79 aa10.11□□□□□ -0.79
CCDC142-203ENST00000454193 XP32Q5T750 250 aa10.07□□□□□ -0.8
CCDC142-203ENST00000454193 RYR1P21817 5038 aa10.01□□□□□ -0.81
CCDC142-203ENST00000454193 MYCBP2O75592 4640 aa10□□□□□ -0.81
CCDC142-203ENST00000454193 RYR3Q15413 4870 aa9.99□□□□□ -0.81
CCDC142-203ENST00000454193 KRTAP17-1Q9BYP8 105 aa9.96□□□□□ -0.82
CCDC142-203ENST00000454193 KRTAP3-3Q9BYR6 98 aa9.95□□□□□ -0.82
CCDC142-203ENST00000454193 MT1HL1P0DM35 61 aa9.91□□□□□ -0.82
CCDC142-203ENST00000454193 S4R3F8 94 aa9.9□□□□□ -0.82
CCDC142-203ENST00000454193 K7ERS5 55 aa9.87□□□□□ -0.83
CCDC142-203ENST00000454193 KIAA1109Q2LD37 5005 aa9.86□□□□□ -0.83
CCDC142-203ENST00000454193 KRTAP10-6P60371 365 aaPredicted RBP9.86□□□□□ -0.83
CCDC142-203ENST00000454193 P0C880 135 aa9.81□□□□□ -0.84
CCDC142-203ENST00000454193 KRTAP3-2Q9BYR7 98 aa9.79□□□□□ -0.84
CCDC142-203ENST00000454193 CRIPTQ9P021 101 aa9.76□□□□□ -0.85
CCDC142-203ENST00000454193 KRTAP13-4Q3LI77 160 aa9.74□□□□□ -0.85
CCDC142-203ENST00000454193 TPRXLQ17RH7 258 aa9.72□□□□□ -0.85
CCDC142-203ENST00000454193 LPAP08519 4548 aa9.69□□□□□ -0.86
CCDC142-203ENST00000454193 A0A0D9SG42 100 aa9.69□□□□□ -0.86
CCDC142-203ENST00000454193 LRP2P98164 4655 aa9.66□□□□□ -0.86
CCDC142-203ENST00000454193 EPPK1P58107 5090 aaKnown RBP9.62□□□□□ -0.87
CCDC142-203ENST00000454193 SPINT4Q6UDR6 99 aa9.55□□□□□ -0.88
CCDC142-203ENST00000454193 ABCA13Q86UQ4 5058 aa9.52□□□□□ -0.88
CCDC142-203ENST00000454193 KRTAP4-5Q9BYR2 181 aa9.48□□□□□ -0.89
CCDC142-203ENST00000454193 KRTAP12-2P59991 146 aa9.44□□□□□ -0.9
CCDC142-203ENST00000454193 M0QZ58 72 aa9.41□□□□□ -0.9
CCDC142-203ENST00000454193 NDUFAF8A1L188 74 aa9.4□□□□□ -0.9
CCDC142-203ENST00000454193 KRTAP15-1Q3LI76 137 aa9.39□□□□□ -0.91
CCDC142-203ENST00000454193 KRTAP12-1P59990 96 aa9.37□□□□□ -0.91
CCDC142-203ENST00000454193 SEC61BP60468 96 aaKnown RBP9.37□□□□□ -0.91
CCDC142-203ENST00000454193 C10orf95Q9H7T3 257 aa9.3□□□□□ -0.92
CCDC142-203ENST00000454193 J3QL48 77 aa9.26□□□□□ -0.93
CCDC142-203ENST00000454193 MUC17Q685J3 4493 aa9.25□□□□□ -0.93
CCDC142-203ENST00000454193 R4GN34 69 aa9.21□□□□□ -0.94
CCDC142-203ENST00000454193 KRTAP4-1Q9BYQ7 146 aa9.19□□□□□ -0.94
CCDC142-203ENST00000454193 HERC2O95714 4834 aa9.13□□□□□ -0.95
CCDC142-203ENST00000454193 LORP23490 312 aaPredicted RBP9.05□□□□□ -0.96
CCDC142-203ENST00000454193 KRTAP19-2Q3LHN2 52 aa9.02□□□□□ -0.97
CCDC142-203ENST00000454193 BIRC6Q9NR09 4857 aa9.02□□□□□ -0.97
CCDC142-203ENST00000454193 A0A0A0MQY5 61 aa9.01□□□□□ -0.97
CCDC142-203ENST00000454193 MUC2Q02817 5179 aa8.91□□□□□ -0.98
CCDC142-203ENST00000454193 FLGP20930 4061 aaPredicted RBP8.83□□□□□ -1
CCDC142-203ENST00000454193 LUZP6Q538Z0 58 aa8.77□□□□□ -1.01
CCDC142-203ENST00000454193 CAMK2N1Q7Z7J9 78 aa8.74□□□□□ -1.01
CCDC142-203ENST00000454193 HERC1Q15751 4861 aa8.68□□□□□ -1.02
CCDC142-203ENST00000454193 PLAC4Q8WY50 150 aa8.68□□□□□ -1.02
CCDC142-203ENST00000454193 HMCN2Q8NDA2 5059 aa8.63□□□□□ -1.03
CCDC142-203ENST00000454193 PCLOQ9Y6V0 5065 aa8.61□□□□□ -1.03
CCDC142-203ENST00000454193 PP632Q6XCG6 107 aa8.54□□□□□ -1.04
CCDC142-203ENST00000454193 LCE2CQ5TA81 110 aa8.5□□□□□ -1.05
CCDC142-203ENST00000454193 FAT4Q6V0I7 4981 aa8.46□□□□□ -1.06
CCDC142-203ENST00000454193 TNP1P09430 55 aa8.4□□□□□ -1.07
CCDC142-203ENST00000454193 M0R2T5 61 aa8.37□□□□□ -1.07
CCDC142-203ENST00000454193 SPRR2GQ9BYE4 73 aa8.35□□□□□ -1.07
CCDC142-203ENST00000454193 MT1HP80294 61 aa8.29□□□□□ -1.08
CCDC142-203ENST00000454193 KRTAP19-1Q8IUB9 90 aa8.29□□□□□ -1.08
CCDC142-203ENST00000454193 RNF213Q63HN8 5207 aa8.27□□□□□ -1.09
CCDC142-203ENST00000454193 KRTAP23-1A1A580 65 aa8.27□□□□□ -1.09
CCDC142-203ENST00000454193 UBR4Q5T4S7 5183 aa8.26□□□□□ -1.09
CCDC142-203ENST00000454193 KRTAP10-10P60014 251 aa8.17□□□□□ -1.1
CCDC142-203ENST00000454193 MT2AP02795 61 aa8.15□□□□□ -1.1
CCDC142-203ENST00000454193 MT1FP04733 61 aa8.14□□□□□ -1.11
CCDC142-203ENST00000454193 KRTAP9-8Q9BYQ0 159 aa8.09□□□□□ -1.11
CCDC142-203ENST00000454193 KRTAP19-8Q3LI54 63 aa7.97□□□□□ -1.13
CCDC142-203ENST00000454193 SPRR5A0A1B0GTR4 108 aa7.97□□□□□ -1.13
CCDC142-203ENST00000454193 LCE3AQ5TA76 89 aa7.93□□□□□ -1.14
CCDC142-203ENST00000454193 MT1BP07438 61 aa7.86□□□□□ -1.15
CCDC142-203ENST00000454193 KRTAP10-5P60370 271 aa7.81□□□□□ -1.16
CCDC142-203ENST00000454193 MT1XP80297 61 aa7.8□□□□□ -1.16
CCDC142-203ENST00000454193 PRO2289Q9P1D8 64 aa7.77□□□□□ -1.17
CCDC142-203ENST00000454193 KRTAP9-3Q9BYQ3 159 aa7.75□□□□□ -1.17
CCDC142-203ENST00000454193 KRTAP8-1Q8IUC2 63 aa7.74□□□□□ -1.17
CCDC142-203ENST00000454193 KRTAP10-12P60413 245 aa7.66□□□□□ -1.18
CCDC142-203ENST00000454193 KRTAP10-7P60409 375 aaPredicted RBP7.58□□□□□ -1.2
CCDC142-203ENST00000454193 KRTAP12-3P60328 96 aa7.57□□□□□ -1.2
CCDC142-203ENST00000454193 INE1O15225 51 aa7.57□□□□□ -1.2
CCDC142-203ENST00000454193 LCE2BO14633 110 aa7.44□□□□□ -1.22
CCDC142-203ENST00000454193 LCE2AQ5TA79 106 aaPredicted RBP7.34□□□□□ -1.23
CCDC142-203ENST00000454193 USH2AO75445 5202 aa7.33□□□□□ -1.24
CCDC142-203ENST00000454193 KRTAP9-6A0A140TA67 174 aa7.29□□□□□ -1.24
CCDC142-203ENST00000454193 KRTAP19-5Q3LI72 72 aa7.26□□□□□ -1.25
CCDC142-203ENST00000454193 KRTAP9-2Q9BYQ4 174 aa7.24□□□□□ -1.25
CCDC142-203ENST00000454193 KMT2DO14686 5537 aa7.18□□□□□ -1.26
CCDC142-203ENST00000454193 LCE3CQ5T5A8 94 aa7.12□□□□□ -1.27
CCDC142-203ENST00000454193 KRTAP4-8A0A0G2JLE6 195 aa7.11□□□□□ -1.27
CCDC142-203ENST00000454193 KRTAP4-8Q9BYQ9 185 aa7.11□□□□□ -1.27
CCDC142-203ENST00000454193 KRTAP19-7Q3SYF9 63 aa6.95□□□□□ -1.3
CCDC142-203ENST00000454193 SSPOA2VEC9 5147 aa6.84□□□□□ -1.31
CCDC142-203ENST00000454193 LCE2DQ5TA82 110 aaPredicted RBP6.83□□□□□ -1.32
CCDC142-203ENST00000454193 KRTAP9-6A8MVA2 160 aa6.82□□□□□ -1.32
CCDC142-203ENST00000454193 KRTAP19-4Q3LI73 84 aa6.79□□□□□ -1.32
CCDC142-203ENST00000454193 CRCT1Q9UGL9 99 aa6.78□□□□□ -1.32
CCDC142-203ENST00000454193 KRTAP4-7Q9BYR0 210 aa6.77□□□□□ -1.33
CCDC142-203ENST00000454193 MT1EP04732 61 aa6.76□□□□□ -1.33
CCDC142-203ENST00000454193 MT1LQ93083 61 aa6.75□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms