RNA–Protein interactions for RNA: ENST00000454189.6

GPM6B-205, Transcript of glycoprotein M6B, humanhuman

TSL 1 (best) BASIC

Gene GPM6B, Length 3,957 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPM6B-205ENST00000454189 FAT1Q14517 4588 aa4.02□□□□□ -1.77
GPM6B-205ENST00000454189 DNAH8Q96JB1 4490 aa4.01□□□□□ -1.77
GPM6B-205ENST00000454189 DYNC2H1Q8NCM8 4307 aaKnown RBP3.99□□□□□ -1.77
GPM6B-205ENST00000454189 DYNC1H1Q14204 4646 aaKnown RBP3.98□□□□□ -1.77
GPM6B-205ENST00000454189 FRAS1Q86XX4 4008 aa3.97□□□□□ -1.77
GPM6B-205ENST00000454189 DNAH6Q9C0G6 4158 aa3.95□□□□□ -1.78
GPM6B-205ENST00000454189 HECTD4Q9Y4D8 3996 aa3.94□□□□□ -1.78
GPM6B-205ENST00000454189 VPS13BQ7Z7G8 4022 aa3.94□□□□□ -1.78
GPM6B-205ENST00000454189 KRTAP4-5Q9BYR2 181 aa3.92□□□□□ -1.78
GPM6B-205ENST00000454189 KRTAP10-6P60371 365 aaPredicted RBP3.89□□□□□ -1.79
GPM6B-205ENST00000454189 FAT2Q9NYQ8 4349 aa3.88□□□□□ -1.79
GPM6B-205ENST00000454189 PLAC4Q8WY50 150 aa3.88□□□□□ -1.79
GPM6B-205ENST00000454189 HYDINQ4G0P3 5121 aa3.87□□□□□ -1.79
GPM6B-205ENST00000454189 KRTAP3-3Q9BYR6 98 aa3.87□□□□□ -1.79
GPM6B-205ENST00000454189 C10orf95Q9H7T3 257 aa3.87□□□□□ -1.79
GPM6B-205ENST00000454189 KRTAP13-4Q3LI77 160 aa3.85□□□□□ -1.79
GPM6B-205ENST00000454189 SACSQ9NZJ4 4579 aa3.85□□□□□ -1.79
GPM6B-205ENST00000454189 LUZP6Q538Z0 58 aa3.84□□□□□ -1.8
GPM6B-205ENST00000454189 PKHD1P08F94 4074 aa3.83□□□□□ -1.8
GPM6B-205ENST00000454189 KIAA1109Q2LD37 5005 aa3.83□□□□□ -1.8
GPM6B-205ENST00000454189 KRTAP12-2P59991 146 aa3.83□□□□□ -1.8
GPM6B-205ENST00000454189 KRTAP3-2Q9BYR7 98 aa3.81□□□□□ -1.8
GPM6B-205ENST00000454189 APOBP04114 4563 aaKnown RBP3.81□□□□□ -1.8
GPM6B-205ENST00000454189 RYR1P21817 5038 aa3.81□□□□□ -1.8
GPM6B-205ENST00000454189 MYCBP2O75592 4640 aa3.81□□□□□ -1.8
GPM6B-205ENST00000454189 KRTAP12-1P59990 96 aa3.8□□□□□ -1.8
GPM6B-205ENST00000454189 LRP1Q07954 4544 aaKnown RBP3.79□□□□□ -1.8
GPM6B-205ENST00000454189 RYR3Q15413 4870 aa3.78□□□□□ -1.8
GPM6B-205ENST00000454189 TNP1P09430 55 aa3.78□□□□□ -1.81
GPM6B-205ENST00000454189 RYR2Q92736 4967 aa3.75□□□□□ -1.81
GPM6B-205ENST00000454189 KRTAP10-10P60014 251 aa3.74□□□□□ -1.81
GPM6B-205ENST00000454189 KRTAP17-1Q9BYP8 105 aa3.73□□□□□ -1.81
GPM6B-205ENST00000454189 KMT2CQ8NEZ4 4911 aaKnown RBP3.73□□□□□ -1.81
GPM6B-205ENST00000454189 NDUFAF8A1L188 74 aa3.72□□□□□ -1.81
GPM6B-205ENST00000454189 PKD1P98161 4303 aa3.72□□□□□ -1.81
GPM6B-205ENST00000454189 FAT3Q8TDW7 4589 aa3.72□□□□□ -1.81
GPM6B-205ENST00000454189 PP632Q6XCG6 107 aa3.7□□□□□ -1.82
GPM6B-205ENST00000454189 KRTAP4-1Q9BYQ7 146 aa3.64□□□□□ -1.83
GPM6B-205ENST00000454189 HSPG2P98160 4391 aa3.63□□□□□ -1.83
GPM6B-205ENST00000454189 LORP23490 312 aaPredicted RBP3.61□□□□□ -1.83
GPM6B-205ENST00000454189 LRP2P98164 4655 aa3.6□□□□□ -1.83
GPM6B-205ENST00000454189 A0A0A0MQY5 61 aa3.58□□□□□ -1.84
GPM6B-205ENST00000454189 HERC2O95714 4834 aa3.56□□□□□ -1.84
GPM6B-205ENST00000454189 KRTAP15-1Q3LI76 137 aa3.56□□□□□ -1.84
GPM6B-205ENST00000454189 LOC100996750A0A140TA64 210 aa3.53□□□□□ -1.84
GPM6B-205ENST00000454189 KRTAP4-6Q9BYQ5 205 aa3.53□□□□□ -1.84
GPM6B-205ENST00000454189 PRO2289Q9P1D8 64 aa3.53□□□□□ -1.85
GPM6B-205ENST00000454189 PKHD1L1Q86WI1 4243 aa3.49□□□□□ -1.85
GPM6B-205ENST00000454189 TNXBP22105 4242 aa3.48□□□□□ -1.85
GPM6B-205ENST00000454189 EPPK1P58107 5090 aaKnown RBP3.48□□□□□ -1.85
GPM6B-205ENST00000454189 LPAP08519 4548 aa3.46□□□□□ -1.86
GPM6B-205ENST00000454189 BIRC6Q9NR09 4857 aa3.41□□□□□ -1.86
GPM6B-205ENST00000454189 MT1HP80294 61 aa3.4□□□□□ -1.86
GPM6B-205ENST00000454189 ABCA13Q86UQ4 5058 aa3.38□□□□□ -1.87
GPM6B-205ENST00000454189 LCE2AQ5TA79 106 aaPredicted RBP3.36□□□□□ -1.87
GPM6B-205ENST00000454189 MT2AP02795 61 aa3.35□□□□□ -1.87
GPM6B-205ENST00000454189 SPRR2GQ9BYE4 73 aa3.35□□□□□ -1.87
GPM6B-205ENST00000454189 KRTAP23-1A1A580 65 aa3.32□□□□□ -1.88
GPM6B-205ENST00000454189 MT1FP04733 61 aa3.32□□□□□ -1.88
GPM6B-205ENST00000454189 KRTAP10-12P60413 245 aa3.32□□□□□ -1.88
GPM6B-205ENST00000454189 HERC1Q15751 4861 aa3.3□□□□□ -1.88
GPM6B-205ENST00000454189 LCE3AQ5TA76 89 aa3.29□□□□□ -1.88
GPM6B-205ENST00000454189 KRTAP19-2Q3LHN2 52 aa3.29□□□□□ -1.88
GPM6B-205ENST00000454189 LCE2CQ5TA81 110 aa3.27□□□□□ -1.89
GPM6B-205ENST00000454189 KRTAP19-1Q8IUB9 90 aa3.27□□□□□ -1.89
GPM6B-205ENST00000454189 PCLOQ9Y6V0 5065 aa3.25□□□□□ -1.89
GPM6B-205ENST00000454189 KRTAP12-3P60328 96 aa3.24□□□□□ -1.89
GPM6B-205ENST00000454189 LCE2BO14633 110 aa3.24□□□□□ -1.89
GPM6B-205ENST00000454189 MUC2Q02817 5179 aa3.22□□□□□ -1.89
GPM6B-205ENST00000454189 MUC17Q685J3 4493 aa3.21□□□□□ -1.9
GPM6B-205ENST00000454189 FLGP20930 4061 aaPredicted RBP3.2□□□□□ -1.9
GPM6B-205ENST00000454189 KRTAP9-8Q9BYQ0 159 aa3.19□□□□□ -1.9
GPM6B-205ENST00000454189 KRTAP19-8Q3LI54 63 aa3.17□□□□□ -1.9
GPM6B-205ENST00000454189 KRTAP4-8Q9BYQ9 185 aa3.14□□□□□ -1.91
GPM6B-205ENST00000454189 FAT4Q6V0I7 4981 aa3.13□□□□□ -1.91
GPM6B-205ENST00000454189 RNF213Q63HN8 5207 aa3.12□□□□□ -1.91
GPM6B-205ENST00000454189 MT1BP07438 61 aa3.11□□□□□ -1.91
GPM6B-205ENST00000454189 HMCN2Q8NDA2 5059 aa3.11□□□□□ -1.91
GPM6B-205ENST00000454189 KRTAP8-1Q8IUC2 63 aa3.1□□□□□ -1.91
GPM6B-205ENST00000454189 MT1XP80297 61 aa3.09□□□□□ -1.91
GPM6B-205ENST00000454189 UBR4Q5T4S7 5183 aa3.08□□□□□ -1.92
GPM6B-205ENST00000454189 KRTAP9-3Q9BYQ3 159 aa3.08□□□□□ -1.92
GPM6B-205ENST00000454189 KRTAP10-5P60370 271 aa3.07□□□□□ -1.92
GPM6B-205ENST00000454189 INE1O15225 51 aa3.06□□□□□ -1.92
GPM6B-205ENST00000454189 KRTAP10-7P60409 375 aaPredicted RBP3.06□□□□□ -1.92
GPM6B-205ENST00000454189 SPRR5A0A1B0GTR4 108 aa3.05□□□□□ -1.92
GPM6B-205ENST00000454189 KRTAP19-5Q3LI72 72 aa3.02□□□□□ -1.93
GPM6B-205ENST00000454189 KRTAP9-2Q9BYQ4 174 aa2.96□□□□□ -1.94
GPM6B-205ENST00000454189 CRCT1Q9UGL9 99 aa2.96□□□□□ -1.94
GPM6B-205ENST00000454189 KRTAP4-12Q9BQ66 201 aa2.95□□□□□ -1.94
GPM6B-205ENST00000454189 KRTAP9-1A8MXZ3 250 aaPredicted RBP2.93□□□□□ -1.94
GPM6B-205ENST00000454189 KRTAP4-8A0A0G2JLE6 195 aa2.93□□□□□ -1.94
GPM6B-205ENST00000454189 LCE3CQ5T5A8 94 aa2.93□□□□□ -1.94
GPM6B-205ENST00000454189 KRTAP9-6A0A140TA67 174 aa2.92□□□□□ -1.94
GPM6B-205ENST00000454189 FSIP2Q5CZC0 6907 aa2.9□□□□□ -1.94
GPM6B-205ENST00000454189 KRTAP4-7Q9BYR0 210 aa2.85□□□□□ -1.95
GPM6B-205ENST00000454189 SPRR2FQ96RM1 72 aa2.83□□□□□ -1.96
GPM6B-205ENST00000454189 KRTAP19-4Q3LI73 84 aa2.83□□□□□ -1.96
GPM6B-205ENST00000454189 KRTAP9-9Q9BYP9 154 aa2.83□□□□□ -1.96
GPM6B-205ENST00000454189 KRTAP9-4Q9BYQ2 154 aa2.83□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 113.8 ms