RNA–Protein interactions for RNA: ENST00000454129.5

HCG18-239, Transcript of HLA complex group 18, humanhuman

TSL 4 BASIC

Gene HCG18, Length 4,433 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCG18-239ENST00000454129 A0A1B0GVY2 172 aa3.45□□□□□ -1.86
HCG18-239ENST00000454129 PKHD1P08F94 4074 aa3.45□□□□□ -1.86
HCG18-239ENST00000454129 HYDINQ4G0P3 5121 aa3.45□□□□□ -1.86
HCG18-239ENST00000454129 PKD1P98161 4303 aa3.45□□□□□ -1.86
HCG18-239ENST00000454129 TPRXLQ17RH7 258 aa3.44□□□□□ -1.86
HCG18-239ENST00000454129 KRTAP10-8P60410 259 aa3.43□□□□□ -1.86
HCG18-239ENST00000454129 KMT2CQ8NEZ4 4911 aaKnown RBP3.42□□□□□ -1.86
HCG18-239ENST00000454129 H0YAA0 97 aa3.41□□□□□ -1.86
HCG18-239ENST00000454129 C10orf95Q9H7T3 257 aa3.41□□□□□ -1.86
HCG18-239ENST00000454129 DNAH11Q96DT5 4516 aa3.39□□□□□ -1.87
HCG18-239ENST00000454129 DNAH5Q8TE73 4624 aa3.39□□□□□ -1.87
HCG18-239ENST00000454129 P0C880 135 aa3.39□□□□□ -1.87
HCG18-239ENST00000454129 KRTAP10-10P60014 251 aa3.37□□□□□ -1.87
HCG18-239ENST00000454129 PP632Q6XCG6 107 aa3.36□□□□□ -1.87
HCG18-239ENST00000454129 KIAA1109Q2LD37 5005 aa3.33□□□□□ -1.88
HCG18-239ENST00000454129 FAT1Q14517 4588 aa3.33□□□□□ -1.88
HCG18-239ENST00000454129 MYCBP2O75592 4640 aa3.32□□□□□ -1.88
HCG18-239ENST00000454129 SACSQ9NZJ4 4579 aa3.3□□□□□ -1.88
HCG18-239ENST00000454129 RYR3Q15413 4870 aa3.29□□□□□ -1.88
HCG18-239ENST00000454129 PRO2289Q9P1D8 64 aa3.26□□□□□ -1.89
HCG18-239ENST00000454129 DYNC1H1Q14204 4646 aaKnown RBP3.25□□□□□ -1.89
HCG18-239ENST00000454129 LRP1BQ9NZR2 4599 aa3.24□□□□□ -1.89
HCG18-239ENST00000454129 PKHD1L1Q86WI1 4243 aa3.24□□□□□ -1.89
HCG18-239ENST00000454129 RYR2Q92736 4967 aa3.23□□□□□ -1.89
HCG18-239ENST00000454129 RYR1P21817 5038 aa3.23□□□□□ -1.89
HCG18-239ENST00000454129 EPPK1P58107 5090 aaKnown RBP3.23□□□□□ -1.89
HCG18-239ENST00000454129 KRTAP4-5Q9BYR2 181 aa3.22□□□□□ -1.89
HCG18-239ENST00000454129 KRTAP12-2P59991 146 aa3.21□□□□□ -1.9
HCG18-239ENST00000454129 KRTAP3-1Q9BYR8 98 aa3.21□□□□□ -1.9
HCG18-239ENST00000454129 LPAP08519 4548 aa3.19□□□□□ -1.9
HCG18-239ENST00000454129 APOBP04114 4563 aaKnown RBP3.18□□□□□ -1.9
HCG18-239ENST00000454129 FAT3Q8TDW7 4589 aa3.17□□□□□ -1.9
HCG18-239ENST00000454129 KRTAP12-1P59990 96 aa3.17□□□□□ -1.9
HCG18-239ENST00000454129 KRTAP15-1Q3LI76 137 aa3.16□□□□□ -1.9
HCG18-239ENST00000454129 LRP1Q07954 4544 aaKnown RBP3.16□□□□□ -1.9
HCG18-239ENST00000454129 KRTAP13-4Q3LI77 160 aa3.13□□□□□ -1.91
HCG18-239ENST00000454129 TNXBP22105 4242 aa3.13□□□□□ -1.91
HCG18-239ENST00000454129 HERC2O95714 4834 aa3.13□□□□□ -1.91
HCG18-239ENST00000454129 HSPG2P98160 4391 aa3.12□□□□□ -1.91
HCG18-239ENST00000454129 KRTAP17-1Q9BYP8 105 aa3.11□□□□□ -1.91
HCG18-239ENST00000454129 KRTAP10-6P60371 365 aaPredicted RBP3.11□□□□□ -1.91
HCG18-239ENST00000454129 MT1HL1P0DM35 61 aa3.1□□□□□ -1.91
HCG18-239ENST00000454129 ABCA13Q86UQ4 5058 aa3.05□□□□□ -1.92
HCG18-239ENST00000454129 BIRC6Q9NR09 4857 aa3.05□□□□□ -1.92
HCG18-239ENST00000454129 HERC1Q15751 4861 aa3.03□□□□□ -1.92
HCG18-239ENST00000454129 KRTAP10-4P60372 401 aaPredicted RBP3.03□□□□□ -1.92
HCG18-239ENST00000454129 KRTAP3-2Q9BYR7 98 aa3.03□□□□□ -1.92
HCG18-239ENST00000454129 KRTAP3-3Q9BYR6 98 aa3.03□□□□□ -1.93
HCG18-239ENST00000454129 LRP2P98164 4655 aa3.01□□□□□ -1.93
HCG18-239ENST00000454129 PCLOQ9Y6V0 5065 aa2.98□□□□□ -1.93
HCG18-239ENST00000454129 RNF213Q63HN8 5207 aa2.95□□□□□ -1.94
HCG18-239ENST00000454129 LCE2DQ5TA82 110 aaPredicted RBP2.94□□□□□ -1.94
HCG18-239ENST00000454129 INE1O15225 51 aa2.93□□□□□ -1.94
HCG18-239ENST00000454129 UBR4Q5T4S7 5183 aa2.92□□□□□ -1.94
HCG18-239ENST00000454129 MUC2Q02817 5179 aa2.91□□□□□ -1.94
HCG18-239ENST00000454129 KRTAP10-12P60413 245 aa2.89□□□□□ -1.95
HCG18-239ENST00000454129 LORP23490 312 aaPredicted RBP2.85□□□□□ -1.95
HCG18-239ENST00000454129 CRCT1Q9UGL9 99 aa2.84□□□□□ -1.96
HCG18-239ENST00000454129 KRTAP12-3P60328 96 aa2.83□□□□□ -1.96
HCG18-239ENST00000454129 FSIP2Q5CZC0 6907 aa2.83□□□□□ -1.96
HCG18-239ENST00000454129 FAT4Q6V0I7 4981 aa2.8□□□□□ -1.96
HCG18-239ENST00000454129 MUC17Q685J3 4493 aa2.79□□□□□ -1.96
HCG18-239ENST00000454129 LCE3AQ5TA76 89 aa2.79□□□□□ -1.96
HCG18-239ENST00000454129 FLGP20930 4061 aaPredicted RBP2.77□□□□□ -1.97
HCG18-239ENST00000454129 KRTAP23-1A1A580 65 aa2.77□□□□□ -1.97
HCG18-239ENST00000454129 KRTAP4-1Q9BYQ7 146 aa2.75□□□□□ -1.97
HCG18-239ENST00000454129 HMCN2Q8NDA2 5059 aa2.74□□□□□ -1.97
HCG18-239ENST00000454129 KRTAP8-1Q8IUC2 63 aa2.69□□□□□ -1.98
HCG18-239ENST00000454129 MT1HP80294 61 aa2.67□□□□□ -1.98
HCG18-239ENST00000454129 SPRR5A0A1B0GTR4 108 aa2.67□□□□□ -1.98
HCG18-239ENST00000454129 MT2AP02795 61 aa2.66□□□□□ -1.98
HCG18-239ENST00000454129 KRTAP10-5P60370 271 aa2.62□□□□□ -1.99
HCG18-239ENST00000454129 SPRR2GQ9BYE4 73 aa2.62□□□□□ -1.99
HCG18-239ENST00000454129 MT1FP04733 61 aa2.6□□□□□ -1.99
HCG18-239ENST00000454129 KRTAP19-2Q3LHN2 52 aa2.55□□□□□ -2
HCG18-239ENST00000454129 USH2AO75445 5202 aa2.53□□□□□ -2
HCG18-239ENST00000454129 KRTAP19-5Q3LI72 72 aa2.52□□□□□ -2.01
HCG18-239ENST00000454129 SPRR2FQ96RM1 72 aa2.52□□□□□ -2.01
HCG18-239ENST00000454129 LCE2BO14633 110 aa2.5□□□□□ -2.01
HCG18-239ENST00000454129 LCE2AQ5TA79 106 aaPredicted RBP2.5□□□□□ -2.01
HCG18-239ENST00000454129 LCE2CQ5TA81 110 aa2.5□□□□□ -2.01
HCG18-239ENST00000454129 KRTAP19-1Q8IUB9 90 aa2.48□□□□□ -2.01
HCG18-239ENST00000454129 KRTAP10-7P60409 375 aaPredicted RBP2.47□□□□□ -2.01
HCG18-239ENST00000454129 LCE3CQ5T5A8 94 aa2.45□□□□□ -2.02
HCG18-239ENST00000454129 KRTAP19-8Q3LI54 63 aa2.44□□□□□ -2.02
HCG18-239ENST00000454129 SYNE1Q8NF91 8797 aaKnown RBP2.44□□□□□ -2.02
HCG18-239ENST00000454129 KRTAP19-4Q3LI73 84 aa2.39□□□□□ -2.03
HCG18-239ENST00000454129 KRTAP9-8Q9BYQ0 159 aa2.39□□□□□ -2.03
HCG18-239ENST00000454129 MT1XP80297 61 aa2.38□□□□□ -2.03
HCG18-239ENST00000454129 MT1BP07438 61 aa2.37□□□□□ -2.03
HCG18-239ENST00000454129 KRTAP4-8A0A0G2JLE6 195 aa2.33□□□□□ -2.04
HCG18-239ENST00000454129 KRTAP4-8Q9BYQ9 185 aa2.33□□□□□ -2.04
HCG18-239ENST00000454129 KMT2DO14686 5537 aa2.33□□□□□ -2.04
HCG18-239ENST00000454129 SPRR2EP22531 72 aa2.32□□□□□ -2.04
HCG18-239ENST00000454129 SPRR2BP35325 72 aa2.32□□□□□ -2.04
HCG18-239ENST00000454129 SPRR2AP35326 72 aa2.32□□□□□ -2.04
HCG18-239ENST00000454129 KRTAP9-3Q9BYQ3 159 aa2.32□□□□□ -2.04
HCG18-239ENST00000454129 KRTAP9-2Q9BYQ4 174 aa2.31□□□□□ -2.04
HCG18-239ENST00000454129 MT1GP13640 62 aa2.29□□□□□ -2.04
HCG18-239ENST00000454129 LCE3BQ5TA77 95 aa2.29□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms