RNA–Protein interactions for RNA: ENST00000453796.1

HSPG2-207, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 2

Gene HSPG2, Length 621 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-207ENST00000453796 MACF1Q9UPN3 7388 aaKnown RBP6.55□□□□□ -1.36
HSPG2-207ENST00000453796 KLKP1Q107X0 134 aa6.54□□□□□ -1.36
HSPG2-207ENST00000453796 KRTAP19-8Q3LI54 63 aa6.54□□□□□ -1.36
HSPG2-207ENST00000453796 OCR1Q9BZK8 76 aa6.53□□□□□ -1.36
HSPG2-207ENST00000453796 LINC00208Q96KT6 92 aa6.5□□□□□ -1.37
HSPG2-207ENST00000453796 Q5VV11 94 aa6.49□□□□□ -1.37
HSPG2-207ENST00000453796 A8MUN3 132 aa6.47□□□□□ -1.37
HSPG2-207ENST00000453796 H0YAA0 97 aa6.45□□□□□ -1.38
HSPG2-207ENST00000453796 J3QR89 54 aa6.45□□□□□ -1.38
HSPG2-207ENST00000453796 NDUFC1O43677 76 aa6.45□□□□□ -1.38
HSPG2-207ENST00000453796 IMUPQ9GZP8 106 aa6.45□□□□□ -1.38
HSPG2-207ENST00000453796 MP68P56378 58 aa6.44□□□□□ -1.38
HSPG2-207ENST00000453796 CRIPTQ9P021 101 aa6.43□□□□□ -1.38
HSPG2-207ENST00000453796 A6NN06 94 aa6.4□□□□□ -1.38
HSPG2-207ENST00000453796 SYNE2Q8WXH0 6885 aaKnown RBP6.39□□□□□ -1.39
HSPG2-207ENST00000453796 H3BPC8 53 aa6.39□□□□□ -1.39
HSPG2-207ENST00000453796 KRTAP10-5P60370 271 aa6.38□□□□□ -1.39
HSPG2-207ENST00000453796 KRTAP6-3Q3LI67 103 aa6.38□□□□□ -1.39
HSPG2-207ENST00000453796 ADM2Q7Z4H4 148 aa6.33□□□□□ -1.4
HSPG2-207ENST00000453796 SCGB1A1P11684 91 aa6.32□□□□□ -1.4
HSPG2-207ENST00000453796 DMAC1Q96GE9 116 aa6.32□□□□□ -1.4
HSPG2-207ENST00000453796 MT-ATP8P03928 68 aa6.27□□□□□ -1.41
HSPG2-207ENST00000453796 K7ERU9 68 aa6.23□□□□□ -1.41
HSPG2-207ENST00000453796 P0C880 135 aa6.23□□□□□ -1.41
HSPG2-207ENST00000453796 TRAV7A0A075B6U4 112 aa6.2□□□□□ -1.42
HSPG2-207ENST00000453796 KRTAP3-2Q9BYR7 98 aa6.2□□□□□ -1.42
HSPG2-207ENST00000453796 SMIM20Q8N5G0 67 aa6.19□□□□□ -1.42
HSPG2-207ENST00000453796 C20orf197Q8N268 126 aa6.16□□□□□ -1.42
HSPG2-207ENST00000453796 R4GN34 69 aa6.16□□□□□ -1.42
HSPG2-207ENST00000453796 ACYP2P14621 99 aa6.14□□□□□ -1.43
HSPG2-207ENST00000453796 MT1XP80297 61 aa6.14□□□□□ -1.43
HSPG2-207ENST00000453796 KRTAP5-9P26371 169 aa6.13□□□□□ -1.43
HSPG2-207ENST00000453796 M0QZ58 72 aa6.11□□□□□ -1.43
HSPG2-207ENST00000453796 MUC12Q9UKN1 5478 aa6.1□□□□□ -1.43
HSPG2-207ENST00000453796 PLAC4Q8WY50 150 aa6.1□□□□□ -1.43
HSPG2-207ENST00000453796 PRO2289Q9P1D8 64 aa6.09□□□□□ -1.43
HSPG2-207ENST00000453796 SNURFQ9Y675 71 aa6.07□□□□□ -1.44
HSPG2-207ENST00000453796 SPTSSBQ8NFR3 76 aa6.03□□□□□ -1.44
HSPG2-207ENST00000453796 KMT2DO14686 5537 aa6.02□□□□□ -1.45
HSPG2-207ENST00000453796 NEBP20929 6669 aa6.01□□□□□ -1.45
HSPG2-207ENST00000453796 SPANXA2-OT1Q8N9U9 137 aa6.01□□□□□ -1.45
HSPG2-207ENST00000453796 LINC01554Q52M75 96 aa6□□□□□ -1.45
HSPG2-207ENST00000453796 SERP2Q8N6R1 65 aa5.99□□□□□ -1.45
HSPG2-207ENST00000453796 CHKB-CPT1BH3BT56 60 aa5.98□□□□□ -1.45
HSPG2-207ENST00000453796 KRTAP12-2P59991 146 aa5.98□□□□□ -1.45
HSPG2-207ENST00000453796 MDN1Q9NU22 5596 aa5.92□□□□□ -1.46
HSPG2-207ENST00000453796 SPRR2FQ96RM1 72 aa5.9□□□□□ -1.46
HSPG2-207ENST00000453796 KRTAP8-1Q8IUC2 63 aa5.89□□□□□ -1.47
HSPG2-207ENST00000453796 KRTAP20-1Q3LI63 56 aa5.87□□□□□ -1.47
HSPG2-207ENST00000453796 KRTAP4-8A0A0G2JLE6 195 aa5.86□□□□□ -1.47
HSPG2-207ENST00000453796 KRTAP4-8Q9BYQ9 185 aa5.86□□□□□ -1.47
HSPG2-207ENST00000453796 KRTAP10-7P60409 375 aaPredicted RBP5.85□□□□□ -1.47
HSPG2-207ENST00000453796 KRTAP13-4Q3LI77 160 aa5.84□□□□□ -1.47
HSPG2-207ENST00000453796 KRTAP10-12P60413 245 aa5.83□□□□□ -1.48
HSPG2-207ENST00000453796 COA5Q86WW8 74 aa5.83□□□□□ -1.48
HSPG2-207ENST00000453796 COX7CP15954 63 aa5.82□□□□□ -1.48
HSPG2-207ENST00000453796 SPRR2EP22531 72 aa5.81□□□□□ -1.48
HSPG2-207ENST00000453796 SPRR2BP35325 72 aa5.81□□□□□ -1.48
HSPG2-207ENST00000453796 SPRR2AP35326 72 aa5.81□□□□□ -1.48
HSPG2-207ENST00000453796 LCE1AQ5T7P2 110 aa5.78□□□□□ -1.48
HSPG2-207ENST00000453796 CYSTM1Q9H1C7 97 aa5.77□□□□□ -1.49
HSPG2-207ENST00000453796 H7BZZ5 65 aa5.75□□□□□ -1.49
HSPG2-207ENST00000453796 KRTAP2-3P0C7H8 128 aa5.74□□□□□ -1.49
HSPG2-207ENST00000453796 KRTAP2-4Q9BYR9 128 aa5.74□□□□□ -1.49
HSPG2-207ENST00000453796 SEC61GP60059 68 aa5.66□□□□□ -1.5
HSPG2-207ENST00000453796 SERP1Q9Y6X1 66 aa5.66□□□□□ -1.5
HSPG2-207ENST00000453796 CAMK2N1Q7Z7J9 78 aa5.64□□□□□ -1.51
HSPG2-207ENST00000453796 SPATA8Q6RVD6 105 aa5.62□□□□□ -1.51
HSPG2-207ENST00000453796 SPRR2DP22532 72 aa5.61□□□□□ -1.51
HSPG2-207ENST00000453796 A0A0D9SG42 100 aa5.6□□□□□ -1.51
HSPG2-207ENST00000453796 A0A1B0GU33 70 aa5.6□□□□□ -1.51
HSPG2-207ENST00000453796 ANAPC13Q9BS18 74 aa5.58□□□□□ -1.52
HSPG2-207ENST00000453796 KRTAP2-2Q9BYT5 123 aa5.56□□□□□ -1.52
HSPG2-207ENST00000453796 KRTAP2-1Q9BYU5 128 aa5.56□□□□□ -1.52
HSPG2-207ENST00000453796 KRTAP12-1P59990 96 aa5.55□□□□□ -1.52
HSPG2-207ENST00000453796 CCDC179H3BU77 68 aa5.51□□□□□ -1.53
HSPG2-207ENST00000453796 SPINT4Q6UDR6 99 aa5.51□□□□□ -1.53
HSPG2-207ENST00000453796 A0A1B0GU69 56 aa5.5□□□□□ -1.53
HSPG2-207ENST00000453796 KRTAP19-7Q3SYF9 63 aa5.5□□□□□ -1.53
HSPG2-207ENST00000453796 SVIPQ8NHG7 77 aa5.5□□□□□ -1.53
HSPG2-207ENST00000453796 LCE3BQ5TA77 95 aa5.47□□□□□ -1.53
HSPG2-207ENST00000453796 SMIM26A0A096LP01 95 aa5.43□□□□□ -1.54
HSPG2-207ENST00000453796 MT1EP04732 61 aa5.43□□□□□ -1.54
HSPG2-207ENST00000453796 A8MU10 97 aa5.42□□□□□ -1.54
HSPG2-207ENST00000453796 ATP5EP56381 51 aaPredicted RBP5.42□□□□□ -1.54
HSPG2-207ENST00000453796 LCE5AQ5TCM9 118 aa5.4□□□□□ -1.54
HSPG2-207ENST00000453796 KRTAP19-3Q7Z4W3 81 aa5.38□□□□□ -1.55
HSPG2-207ENST00000453796 LINC01558Q9Y6Z2 57 aa5.34□□□□□ -1.55
HSPG2-207ENST00000453796 KRTAP19-5Q3LI72 72 aa5.33□□□□□ -1.56
HSPG2-207ENST00000453796 PRR15LQ9BU68 103 aa5.32□□□□□ -1.56
HSPG2-207ENST00000453796 C10orf95Q9H7T3 257 aa5.3□□□□□ -1.56
HSPG2-207ENST00000453796 TMEM258P61165 79 aa5.29□□□□□ -1.56
HSPG2-207ENST00000453796 DSTQ03001 7570 aaKnown RBP5.27□□□□□ -1.57
HSPG2-207ENST00000453796 MT1GP13640 62 aa5.25□□□□□ -1.57
HSPG2-207ENST00000453796 PCP4P48539 62 aa5.25□□□□□ -1.57
HSPG2-207ENST00000453796 LCE3AQ5TA76 89 aa5.24□□□□□ -1.57
HSPG2-207ENST00000453796 TNP1P09430 55 aa5.23□□□□□ -1.57
HSPG2-207ENST00000453796 MT1LQ93083 61 aa5.2□□□□□ -1.58
HSPG2-207ENST00000453796 UQCR11O14957 56 aa5.17□□□□□ -1.58
HSPG2-207ENST00000453796 PP632Q6XCG6 107 aa5.17□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 127.4 ms