RNA–Protein interactions for RNA: ENST00000453744.6

UBE2D3-210, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene UBE2D3, Length 3,990 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-210ENST00000453744 KRTAP10-8P60410 259 aa7.06□□□□□ -1.28
UBE2D3-210ENST00000453744 KRTAP12-2P59991 146 aa7.03□□□□□ -1.28
UBE2D3-210ENST00000453744 HYDINQ4G0P3 5121 aa7.02□□□□□ -1.28
UBE2D3-210ENST00000453744 M0QZ58 72 aa7.02□□□□□ -1.29
UBE2D3-210ENST00000453744 XP32Q5T750 250 aa7.01□□□□□ -1.29
UBE2D3-210ENST00000453744 R4GN34 69 aa7□□□□□ -1.29
UBE2D3-210ENST00000453744 KRTAP3-3Q9BYR6 98 aa6.98□□□□□ -1.29
UBE2D3-210ENST00000453744 KRTAP3-2Q9BYR7 98 aa6.95□□□□□ -1.3
UBE2D3-210ENST00000453744 MYCBP2O75592 4640 aa6.92□□□□□ -1.3
UBE2D3-210ENST00000453744 M0R2T5 61 aa6.9□□□□□ -1.3
UBE2D3-210ENST00000453744 KRTAP12-1P59990 96 aa6.89□□□□□ -1.31
UBE2D3-210ENST00000453744 DYNC1H1Q14204 4646 aaKnown RBP6.86□□□□□ -1.31
UBE2D3-210ENST00000453744 CAMK2N1Q7Z7J9 78 aa6.85□□□□□ -1.31
UBE2D3-210ENST00000453744 PKHD1P08F94 4074 aa6.84□□□□□ -1.31
UBE2D3-210ENST00000453744 KRTAP10-4P60372 401 aaPredicted RBP6.84□□□□□ -1.32
UBE2D3-210ENST00000453744 A0A1B0GVY2 172 aa6.83□□□□□ -1.32
UBE2D3-210ENST00000453744 SACSQ9NZJ4 4579 aa6.81□□□□□ -1.32
UBE2D3-210ENST00000453744 LUZP6Q538Z0 58 aa6.81□□□□□ -1.32
UBE2D3-210ENST00000453744 FAT2Q9NYQ8 4349 aa6.81□□□□□ -1.32
UBE2D3-210ENST00000453744 KRTAP15-1Q3LI76 137 aa6.79□□□□□ -1.32
UBE2D3-210ENST00000453744 KMT2CQ8NEZ4 4911 aaKnown RBP6.76□□□□□ -1.33
UBE2D3-210ENST00000453744 LRP1Q07954 4544 aaKnown RBP6.74□□□□□ -1.33
UBE2D3-210ENST00000453744 PKD1P98161 4303 aa6.74□□□□□ -1.33
UBE2D3-210ENST00000453744 PLAC4Q8WY50 150 aa6.72□□□□□ -1.33
UBE2D3-210ENST00000453744 APOBP04114 4563 aaKnown RBP6.7□□□□□ -1.34
UBE2D3-210ENST00000453744 SEC61BP60468 96 aaKnown RBP6.68□□□□□ -1.34
UBE2D3-210ENST00000453744 FAT3Q8TDW7 4589 aa6.6□□□□□ -1.35
UBE2D3-210ENST00000453744 RYR2Q92736 4967 aa6.6□□□□□ -1.35
UBE2D3-210ENST00000453744 A0A0A0MQY5 61 aa6.58□□□□□ -1.36
UBE2D3-210ENST00000453744 HSPG2P98160 4391 aa6.55□□□□□ -1.36
UBE2D3-210ENST00000453744 RYR3Q15413 4870 aa6.55□□□□□ -1.36
UBE2D3-210ENST00000453744 MT1HL1P0DM35 61 aa6.5□□□□□ -1.37
UBE2D3-210ENST00000453744 LORP23490 312 aaPredicted RBP6.49□□□□□ -1.37
UBE2D3-210ENST00000453744 LRP2P98164 4655 aa6.46□□□□□ -1.37
UBE2D3-210ENST00000453744 KRTAP4-5Q9BYR2 181 aa6.41□□□□□ -1.38
UBE2D3-210ENST00000453744 KIAA1109Q2LD37 5005 aa6.41□□□□□ -1.38
UBE2D3-210ENST00000453744 RYR1P21817 5038 aa6.4□□□□□ -1.38
UBE2D3-210ENST00000453744 PKHD1L1Q86WI1 4243 aa6.39□□□□□ -1.39
UBE2D3-210ENST00000453744 PP632Q6XCG6 107 aa6.38□□□□□ -1.39
UBE2D3-210ENST00000453744 TNP1P09430 55 aa6.37□□□□□ -1.39
UBE2D3-210ENST00000453744 EPPK1P58107 5090 aaKnown RBP6.33□□□□□ -1.4
UBE2D3-210ENST00000453744 KRTAP17-1Q9BYP8 105 aa6.33□□□□□ -1.4
UBE2D3-210ENST00000453744 LPAP08519 4548 aa6.31□□□□□ -1.4
UBE2D3-210ENST00000453744 TNXBP22105 4242 aa6.25□□□□□ -1.41
UBE2D3-210ENST00000453744 KRTAP4-1Q9BYQ7 146 aa6.17□□□□□ -1.42
UBE2D3-210ENST00000453744 ABCA13Q86UQ4 5058 aa6.07□□□□□ -1.44
UBE2D3-210ENST00000453744 KRTAP10-10P60014 251 aa6.07□□□□□ -1.44
UBE2D3-210ENST00000453744 HERC2O95714 4834 aa5.93□□□□□ -1.46
UBE2D3-210ENST00000453744 MUC2Q02817 5179 aa5.89□□□□□ -1.47
UBE2D3-210ENST00000453744 LCE3AQ5TA76 89 aa5.83□□□□□ -1.48
UBE2D3-210ENST00000453744 PCLOQ9Y6V0 5065 aa5.83□□□□□ -1.48
UBE2D3-210ENST00000453744 HERC1Q15751 4861 aa5.79□□□□□ -1.48
UBE2D3-210ENST00000453744 BIRC6Q9NR09 4857 aa5.77□□□□□ -1.49
UBE2D3-210ENST00000453744 KRTAP23-1A1A580 65 aa5.73□□□□□ -1.49
UBE2D3-210ENST00000453744 MUC17Q685J3 4493 aa5.7□□□□□ -1.5
UBE2D3-210ENST00000453744 KRTAP19-2Q3LHN2 52 aa5.7□□□□□ -1.5
UBE2D3-210ENST00000453744 FAT4Q6V0I7 4981 aa5.64□□□□□ -1.51
UBE2D3-210ENST00000453744 SPRR5A0A1B0GTR4 108 aa5.62□□□□□ -1.51
UBE2D3-210ENST00000453744 PRO2289Q9P1D8 64 aa5.61□□□□□ -1.51
UBE2D3-210ENST00000453744 FLGP20930 4061 aaPredicted RBP5.59□□□□□ -1.51
UBE2D3-210ENST00000453744 KRTAP19-1Q8IUB9 90 aa5.58□□□□□ -1.52
UBE2D3-210ENST00000453744 FSIP2Q5CZC0 6907 aa5.58□□□□□ -1.52
UBE2D3-210ENST00000453744 KRTAP12-3P60328 96 aa5.57□□□□□ -1.52
UBE2D3-210ENST00000453744 SPRR2GQ9BYE4 73 aa5.57□□□□□ -1.52
UBE2D3-210ENST00000453744 RNF213Q63HN8 5207 aa5.56□□□□□ -1.52
UBE2D3-210ENST00000453744 KRTAP10-12P60413 245 aa5.55□□□□□ -1.52
UBE2D3-210ENST00000453744 HMCN2Q8NDA2 5059 aa5.51□□□□□ -1.53
UBE2D3-210ENST00000453744 INE1O15225 51 aa5.5□□□□□ -1.53
UBE2D3-210ENST00000453744 MT1FP04733 61 aa5.5□□□□□ -1.53
UBE2D3-210ENST00000453744 UBR4Q5T4S7 5183 aa5.49□□□□□ -1.53
UBE2D3-210ENST00000453744 MT2AP02795 61 aa5.47□□□□□ -1.53
UBE2D3-210ENST00000453744 MT1HP80294 61 aa5.46□□□□□ -1.54
UBE2D3-210ENST00000453744 KRTAP8-1Q8IUC2 63 aa5.43□□□□□ -1.54
UBE2D3-210ENST00000453744 LCE2CQ5TA81 110 aa5.42□□□□□ -1.54
UBE2D3-210ENST00000453744 KRTAP10-7P60409 375 aaPredicted RBP5.32□□□□□ -1.56
UBE2D3-210ENST00000453744 MT1XP80297 61 aa5.3□□□□□ -1.56
UBE2D3-210ENST00000453744 KRTAP10-5P60370 271 aa5.29□□□□□ -1.56
UBE2D3-210ENST00000453744 MT1BP07438 61 aa5.26□□□□□ -1.57
UBE2D3-210ENST00000453744 KRTAP9-8Q9BYQ0 159 aa5.25□□□□□ -1.57
UBE2D3-210ENST00000453744 KRTAP19-8Q3LI54 63 aa5.22□□□□□ -1.57
UBE2D3-210ENST00000453744 KRTAP19-5Q3LI72 72 aa5.2□□□□□ -1.58
UBE2D3-210ENST00000453744 LCE3CQ5T5A8 94 aa5.12□□□□□ -1.59
UBE2D3-210ENST00000453744 CRCT1Q9UGL9 99 aa5.11□□□□□ -1.59
UBE2D3-210ENST00000453744 OBSCNQ5VST9 7968 aa5.07□□□□□ -1.6
UBE2D3-210ENST00000453744 KRTAP4-8A0A0G2JLE6 195 aa5.06□□□□□ -1.6
UBE2D3-210ENST00000453744 KRTAP4-8Q9BYQ9 185 aa5.06□□□□□ -1.6
UBE2D3-210ENST00000453744 KMT2DO14686 5537 aa5.04□□□□□ -1.6
UBE2D3-210ENST00000453744 KRTAP9-3Q9BYQ3 159 aa5.01□□□□□ -1.61
UBE2D3-210ENST00000453744 USH2AO75445 5202 aa5□□□□□ -1.61
UBE2D3-210ENST00000453744 KRTAP4-7Q9BYR0 210 aa4.98□□□□□ -1.61
UBE2D3-210ENST00000453744 SYNE1Q8NF91 8797 aaKnown RBP4.9□□□□□ -1.62
UBE2D3-210ENST00000453744 LCE2BO14633 110 aa4.86□□□□□ -1.63
UBE2D3-210ENST00000453744 KRTAP9-6A8MVA2 160 aa4.84□□□□□ -1.64
UBE2D3-210ENST00000453744 SPRR2FQ96RM1 72 aa4.7□□□□□ -1.66
UBE2D3-210ENST00000453744 DSTQ03001 7570 aaKnown RBP4.69□□□□□ -1.66
UBE2D3-210ENST00000453744 KRTAP19-7Q3SYF9 63 aa4.67□□□□□ -1.66
UBE2D3-210ENST00000453744 MT1LQ93083 61 aa4.63□□□□□ -1.67
UBE2D3-210ENST00000453744 MT1GP13640 62 aa4.63□□□□□ -1.67
UBE2D3-210ENST00000453744 KRTAP2-3P0C7H8 128 aa4.62□□□□□ -1.67
UBE2D3-210ENST00000453744 KRTAP2-4Q9BYR9 128 aa4.62□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 100.5 ms