RNA–Protein interactions for RNA: ENST00000452382.1

PMS1-218, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 5

Gene PMS1, Length 881 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-218ENST00000452382 SACSQ9NZJ4 4579 aa0.04□□□□□ -2.4
PMS1-218ENST00000452382 ANK3Q12955 4377 aaKnown RBP0.04□□□□□ -2.4
PMS1-218ENST00000452382 NBPF19A0A087WUL8 3843 aa0.04□□□□□ -2.4
PMS1-218ENST00000452382 DEFB1P60022 68 aa0.04□□□□□ -2.4
PMS1-218ENST00000452382 SPRR2FQ96RM1 72 aa0.04□□□□□ -2.4
PMS1-218ENST00000452382 USP9XQ93008 2570 aaPredicted RBP0.04□□□□□ -2.4
PMS1-218ENST00000452382 CELSR3Q9NYQ7 3312 aa0.03□□□□□ -2.4
PMS1-218ENST00000452382 KRTAP19-7Q3SYF9 63 aa0.03□□□□□ -2.4
PMS1-218ENST00000452382 TOMM7Q9P0U1 55 aa0.03□□□□□ -2.4
PMS1-218ENST00000452382 LAMA1P25391 3075 aa0.02□□□□□ -2.41
PMS1-218ENST00000452382 DNAH6Q9C0G6 4158 aa0.02□□□□□ -2.41
PMS1-218ENST00000452382 ATP7AQ04656 1500 aa0.02□□□□□ -2.41
PMS1-218ENST00000452382 SAMD9LQ8IVG5 1584 aa0.02□□□□□ -2.41
PMS1-218ENST00000452382 RELNP78509 3460 aa0.01□□□□□ -2.41
PMS1-218ENST00000452382 WDR87Q6ZQQ6 2873 aa0.01□□□□□ -2.41
PMS1-218ENST00000452382 DYNC2H1Q8NCM8 4307 aaKnown RBP0.01□□□□□ -2.41
PMS1-218ENST00000452382 FAT3Q8TDW7 4589 aa0.01□□□□□ -2.41
PMS1-218ENST00000452382 KRTAP6-1Q3LI64 71 aa0.01□□□□□ -2.41
PMS1-218ENST00000452382 DNAH2Q9P225 4427 aa0.01□□□□□ -2.41
PMS1-218ENST00000452382 DNAH11Q96DT5 4516 aa0.01□□□□□ -2.41
PMS1-218ENST00000452382 TOP2AP11388 1531 aaKnown RBP0.01□□□□□ -2.41
PMS1-218ENST00000452382 VPS13DQ5THJ4 4388 aa0.01□□□□□ -2.41
PMS1-218ENST00000452382 SPTAN1Q13813 2472 aaKnown RBP0.01□□□□□ -2.41
PMS1-218ENST00000452382 RPL39P62891 51 aaKnown RBP0□□□□□ -2.41
PMS1-218ENST00000452382 KRTAP19-8Q3LI54 63 aa0□□□□□ -2.41
PMS1-218ENST00000452382 CHD7Q9P2D1 2997 aa0□□□□□ -2.41
PMS1-218ENST00000452382 ZFHX4Q86UP3 3567 aa-0□□□□□ -2.41
PMS1-218ENST00000452382 DSTQ03001 7570 aaKnown RBP-0.01□□□□□ -2.41
PMS1-218ENST00000452382 APOBP04114 4563 aaKnown RBP-0.01□□□□□ -2.41
PMS1-218ENST00000452382 DNAH1Q9P2D7 4330 aa-0.01□□□□□ -2.41
PMS1-218ENST00000452382 KRTAP8-1Q8IUC2 63 aa-0.01□□□□□ -2.41
PMS1-218ENST00000452382 SRCAPQ6ZRS2 3230 aa-0.01□□□□□ -2.41
PMS1-218ENST00000452382 ADGRG4Q8IZF6 3080 aa-0.01□□□□□ -2.41
PMS1-218ENST00000452382 FAT1Q14517 4588 aa-0.02□□□□□ -2.41
PMS1-218ENST00000452382 USP9YO00507 2555 aaPredicted RBP-0.03□□□□□ -2.41
PMS1-218ENST00000452382 SMR3BP02814 79 aaPredicted RBP-0.03□□□□□ -2.41
PMS1-218ENST00000452382 DOPEY1Q5JWR5 2465 aa-0.03□□□□□ -2.41
PMS1-218ENST00000452382 DNAH7Q8WXX0 4024 aa-0.03□□□□□ -2.41
PMS1-218ENST00000452382 ITPR1Q14643 2758 aa-0.04□□□□□ -2.42
PMS1-218ENST00000452382 MUC2Q02817 5179 aa-0.04□□□□□ -2.42
PMS1-218ENST00000452382 KRTAP19-5Q3LI72 72 aa-0.04□□□□□ -2.42
PMS1-218ENST00000452382 LEAP2Q969E1 77 aa-0.04□□□□□ -2.42
PMS1-218ENST00000452382 RPL39LQ96EH5 51 aaKnown RBP-0.04□□□□□ -2.42
PMS1-218ENST00000452382 ITPR3Q14573 2671 aa-0.04□□□□□ -2.42
PMS1-218ENST00000452382 FSIP2Q5CZC0 6907 aa-0.05□□□□□ -2.42
PMS1-218ENST00000452382 SNRPGP62308 76 aaKnown RBP-0.05□□□□□ -2.42
PMS1-218ENST00000452382 LINC01590Q5TEZ4 76 aa-0.05□□□□□ -2.42
PMS1-218ENST00000452382 DNAH8Q96JB1 4490 aa-0.05□□□□□ -2.42
PMS1-218ENST00000452382 C5orf42Q9H799 3197 aa-0.06□□□□□ -2.42
PMS1-218ENST00000452382 PCLOQ9Y6V0 5065 aa-0.06□□□□□ -2.42
PMS1-218ENST00000452382 STARD9Q9P2P6 4700 aa-0.06□□□□□ -2.42
PMS1-218ENST00000452382 MT1HP80294 61 aa-0.06□□□□□ -2.42
PMS1-218ENST00000452382 MGAQ8IWI9 3026 aa-0.06□□□□□ -2.42
PMS1-218ENST00000452382 CSMD1Q96PZ7 3565 aa-0.06□□□□□ -2.42
PMS1-218ENST00000452382 CRYBG3Q68DQ2 2970 aa-0.06□□□□□ -2.42
PMS1-218ENST00000452382 MROH2BQ7Z745 1585 aa-0.06□□□□□ -2.42
PMS1-218ENST00000452382 GPR98Q8WXG9 6306 aa-0.07□□□□□ -2.42
PMS1-218ENST00000452382 LRBAP50851 2863 aa-0.07□□□□□ -2.42
PMS1-218ENST00000452382 SSPOA2VEC9 5147 aa-0.07□□□□□ -2.42
PMS1-218ENST00000452382 GCC2Q8IWJ2 1684 aa-0.08□□□□□ -2.42
PMS1-218ENST00000452382 KMT2CQ8NEZ4 4911 aaKnown RBP-0.08□□□□□ -2.42
PMS1-218ENST00000452382 MYO9AB2RTY4 2548 aa-0.08□□□□□ -2.42
PMS1-218ENST00000452382 DUOX1Q9NRD9 1551 aa-0.09□□□□□ -2.42
PMS1-218ENST00000452382 DEFB136Q30KP8 78 aa-0.09□□□□□ -2.42
PMS1-218ENST00000452382 DMXL2Q8TDJ6 3036 aa-0.09□□□□□ -2.42
PMS1-218ENST00000452382 MUC17Q685J3 4493 aa-0.09□□□□□ -2.42
PMS1-218ENST00000452382 TEX15Q9BXT5 2789 aa-0.1□□□□□ -2.42
PMS1-218ENST00000452382 MACF1Q9UPN3 7388 aaKnown RBP-0.1□□□□□ -2.42
PMS1-218ENST00000452382 CMYA5Q8N3K9 4069 aa-0.1□□□□□ -2.42
PMS1-218ENST00000452382 CFAP46Q8IYW2 2715 aa-0.1□□□□□ -2.43
PMS1-218ENST00000452382 LAMA3Q16787 3333 aa-0.1□□□□□ -2.43
PMS1-218ENST00000452382 KRTAP20-2Q3LI61 65 aa-0.1□□□□□ -2.43
PMS1-218ENST00000452382 RHPN1-AS1Q9BWJ2 59 aa-0.1□□□□□ -2.43
PMS1-218ENST00000452382 PLECQ15149 4684 aaKnown RBP-0.11□□□□□ -2.43
PMS1-218ENST00000452382 DNAH10Q8IVF4 4471 aa-0.11□□□□□ -2.43
PMS1-218ENST00000452382 DEFB104AQ8WTQ1 72 aa-0.11□□□□□ -2.43
PMS1-218ENST00000452382 HERC1Q15751 4861 aa-0.12□□□□□ -2.43
PMS1-218ENST00000452382 LAMA2P24043 3122 aaKnown RBP-0.12□□□□□ -2.43
PMS1-218ENST00000452382 MT4P47944 62 aa-0.12□□□□□ -2.43
PMS1-218ENST00000452382 MUC12Q9UKN1 5478 aa-0.12□□□□□ -2.43
PMS1-218ENST00000452382 DYNC1H1Q14204 4646 aaKnown RBP-0.12□□□□□ -2.43
PMS1-218ENST00000452382 SYNE2Q8WXH0 6885 aaKnown RBP-0.12□□□□□ -2.43
PMS1-218ENST00000452382 CFAP54Q96N23 3096 aa-0.12□□□□□ -2.43
PMS1-218ENST00000452382 TLN1Q9Y490 2541 aaKnown RBP-0.13□□□□□ -2.43
PMS1-218ENST00000452382 UBR4Q5T4S7 5183 aa-0.13□□□□□ -2.43
PMS1-218ENST00000452382 A0A096LNI7 61 aa-0.13□□□□□ -2.43
PMS1-218ENST00000452382 MT1EP04732 61 aa-0.13□□□□□ -2.43
PMS1-218ENST00000452382 NIPBLQ6KC79 2804 aaeCLIP-0.14□□□□□ -2.43
PMS1-218ENST00000452382 SMG1Q96Q15 3661 aaKnown RBP-0.14□□□□□ -2.43
PMS1-218ENST00000452382 DEFB4AO15263 64 aa-0.14□□□□□ -2.43
PMS1-218ENST00000452382 MT1XP80297 61 aa-0.14□□□□□ -2.43
PMS1-218ENST00000452382 MT1LQ93083 61 aa-0.14□□□□□ -2.43
PMS1-218ENST00000452382 ARHGAP5-AS1Q96IT6 56 aa-0.14□□□□□ -2.43
PMS1-218ENST00000452382 DNAH17Q9UFH2 4485 aa-0.15□□□□□ -2.43
PMS1-218ENST00000452382 CEP250Q9BV73 2442 aa-0.15□□□□□ -2.43
PMS1-218ENST00000452382 EYSQ5T1H1 3165 aa-0.15□□□□□ -2.43
PMS1-218ENST00000452382 HTN1P15515 57 aa-0.15□□□□□ -2.43
PMS1-218ENST00000452382 CSMD2Q7Z408 3487 aa-0.15□□□□□ -2.43
PMS1-218ENST00000452382 PRUNE2Q8WUY3 3088 aa-0.16□□□□□ -2.44
PMS1-218ENST00000452382 TRRAPQ9Y4A5 3859 aa-0.16□□□□□ -2.44
Retrieved 100 of 20,778 RNA–protein pairs in 92.2 ms