RNA–Protein interactions for RNA: ENST00000451088.6

GTF3C3-207, Transcript of general transcription factor IIIC subunit 3, humanhuman

TSL 3

Gene GTF3C3, Length 488 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3-207ENST00000451088 Q9BRP9 147 aa2.38□□□□□ -2.03
GTF3C3-207ENST00000451088 NCR3O14931 201 aa2.37□□□□□ -2.03
GTF3C3-207ENST00000451088 UNQ6190/PRO20217Q6UXQ8 127 aa2.37□□□□□ -2.03
GTF3C3-207ENST00000451088 Q6ZQT0 140 aa2.37□□□□□ -2.03
GTF3C3-207ENST00000451088 Q8IZM0 81 aa2.37□□□□□ -2.03
GTF3C3-207ENST00000451088 SPANXA2-OT1Q8N9U9 137 aa2.37□□□□□ -2.03
GTF3C3-207ENST00000451088 SPTSSBQ8NFR3 76 aa2.37□□□□□ -2.03
GTF3C3-207ENST00000451088 ZCCHC13Q8WW36 166 aaKnown RBP2.37□□□□□ -2.03
GTF3C3-207ENST00000451088 A6NED7 52 aa2.36□□□□□ -2.03
GTF3C3-207ENST00000451088 CASC2Q6XLA1 102 aa2.36□□□□□ -2.03
GTF3C3-207ENST00000451088 SMIM11BQ8TCY0 68 aa2.36□□□□□ -2.03
GTF3C3-207ENST00000451088 TOMM7Q9P0U1 55 aa2.36□□□□□ -2.03
GTF3C3-207ENST00000451088 C6orf48Q9UBA6 75 aa2.36□□□□□ -2.03
GTF3C3-207ENST00000451088 IGHV6-1A0A0B4J1U7 121 aa2.35□□□□□ -2.03
GTF3C3-207ENST00000451088 MOBPQ13875 183 aa2.35□□□□□ -2.03
GTF3C3-207ENST00000451088 C6orf99Q4VX62 202 aa2.35□□□□□ -2.03
GTF3C3-207ENST00000451088 PRR15LQ9BU68 103 aa2.34□□□□□ -2.03
GTF3C3-207ENST00000451088 H3BPC8 53 aa2.33□□□□□ -2.04
GTF3C3-207ENST00000451088 COX7B2Q8TF08 81 aa2.33□□□□□ -2.04
GTF3C3-207ENST00000451088 LINC00208Q96KT6 92 aa2.33□□□□□ -2.04
GTF3C3-207ENST00000451088 HIGD2AQ9BW72 106 aa2.33□□□□□ -2.04
GTF3C3-207ENST00000451088 SND1-IT1Q9HBX3 110 aa2.33□□□□□ -2.04
GTF3C3-207ENST00000451088 CDKN2A-AS1Q9UH64 79 aa2.33□□□□□ -2.04
GTF3C3-207ENST00000451088 IGKV2-28A0A075B6P5 120 aa2.32□□□□□ -2.04
GTF3C3-207ENST00000451088 KRTAP5-8O75690 187 aa2.32□□□□□ -2.04
GTF3C3-207ENST00000451088 IGKV2D-28P01615 120 aa2.32□□□□□ -2.04
GTF3C3-207ENST00000451088 IGKV4-1P06312 121 aa2.32□□□□□ -2.04
GTF3C3-207ENST00000451088 COX17Q14061 63 aa2.32□□□□□ -2.04
GTF3C3-207ENST00000451088 XAGE1AQ9HD64 81 aa2.32□□□□□ -2.04
GTF3C3-207ENST00000451088 ETDCA0A1B0GVM5 59 aa2.31□□□□□ -2.04
GTF3C3-207ENST00000451088 KRTAP5-7Q6L8G8 165 aa2.31□□□□□ -2.04
GTF3C3-207ENST00000451088 RETNLBQ9BQ08 111 aa2.31□□□□□ -2.04
GTF3C3-207ENST00000451088 ZNF706Q9Y5V0 76 aaPredicted RBP2.31□□□□□ -2.04
GTF3C3-207ENST00000451088 LINC01558Q9Y6Z2 57 aa2.31□□□□□ -2.04
GTF3C3-207ENST00000451088 KRTAP4-16G5E9R7 235 aaPredicted RBP2.3□□□□□ -2.04
GTF3C3-207ENST00000451088 COX7BP24311 80 aa2.3□□□□□ -2.04
GTF3C3-207ENST00000451088 LINC00304Q8N9R0 145 aa2.3□□□□□ -2.04
GTF3C3-207ENST00000451088 KCNQ1DNQ9H478 68 aa2.3□□□□□ -2.04
GTF3C3-207ENST00000451088 SPAG11AQ6PDA7 123 aa2.29□□□□□ -2.04
GTF3C3-207ENST00000451088 LINC00575Q6W349 94 aa2.29□□□□□ -2.04
GTF3C3-207ENST00000451088 LINC00158P58513 81 aa2.28□□□□□ -2.04
GTF3C3-207ENST00000451088 KRTAP13-1Q8IUC0 172 aa2.28□□□□□ -2.04
GTF3C3-207ENST00000451088 TPRXLQ17RH7 258 aa2.27□□□□□ -2.05
GTF3C3-207ENST00000451088 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP2.27□□□□□ -2.05
GTF3C3-207ENST00000451088 PRLHP81277 87 aa2.26□□□□□ -2.05
GTF3C3-207ENST00000451088 KRTAP13-2Q52LG2 175 aa2.26□□□□□ -2.05
GTF3C3-207ENST00000451088 SPINK1P00995 79 aa2.25□□□□□ -2.05
GTF3C3-207ENST00000451088 ROMO1P60602 79 aa2.25□□□□□ -2.05
GTF3C3-207ENST00000451088 SPRR4Q96PI1 79 aa2.25□□□□□ -2.05
GTF3C3-207ENST00000451088 A0A1W2PNM2 257 aa2.24□□□□□ -2.05
GTF3C3-207ENST00000451088 H0Y9P7 68 aa2.24□□□□□ -2.05
GTF3C3-207ENST00000451088 COA5Q86WW8 74 aa2.24□□□□□ -2.05
GTF3C3-207ENST00000451088 SPRR1AP35321 89 aa2.23□□□□□ -2.05
GTF3C3-207ENST00000451088 RPS29P62273 56 aaKnown RBP2.23□□□□□ -2.05
GTF3C3-207ENST00000451088 SSBP3-AS1Q7Z2R9 100 aa2.23□□□□□ -2.05
GTF3C3-207ENST00000451088 SPINK7P58062 85 aa2.22□□□□□ -2.05
GTF3C3-207ENST00000451088 LINC00483Q53H64 154 aa2.22□□□□□ -2.05
GTF3C3-207ENST00000451088 SPATA8Q6RVD6 105 aa2.22□□□□□ -2.05
GTF3C3-207ENST00000451088 Q6ZQY7 126 aa2.22□□□□□ -2.05
GTF3C3-207ENST00000451088 KRTAP4-1Q9BYQ7 146 aa2.22□□□□□ -2.05
GTF3C3-207ENST00000451088 A0A087WSZ3 146 aa2.21□□□□□ -2.06
GTF3C3-207ENST00000451088 IGLV6-57P01721 117 aa2.21□□□□□ -2.06
GTF3C3-207ENST00000451088 Q6ZRX8 168 aa2.21□□□□□ -2.06
GTF3C3-207ENST00000451088 ST20-AS1Q8NBB2 130 aa2.21□□□□□ -2.06
GTF3C3-207ENST00000451088 FCGBPQ9Y6R7 5405 aaPredicted RBP2.2□□□□□ -2.06
GTF3C3-207ENST00000451088 IGLV5-48A0A075B6I7 105 aa2.2□□□□□ -2.06
GTF3C3-207ENST00000451088 CSAG1Q6PB30 78 aa2.2□□□□□ -2.06
GTF3C3-207ENST00000451088 ADM2Q7Z4H4 148 aa2.2□□□□□ -2.06
GTF3C3-207ENST00000451088 Q8NDZ9 215 aa2.2□□□□□ -2.06
GTF3C3-207ENST00000451088 MUC17Q685J3 4493 aa2.2□□□□□ -2.06
GTF3C3-207ENST00000451088 MT1HP80294 61 aa2.19□□□□□ -2.06
GTF3C3-207ENST00000451088 MIR22HGQ0VDD5 57 aa2.19□□□□□ -2.06
GTF3C3-207ENST00000451088 UQCR11O14957 56 aa2.18□□□□□ -2.06
GTF3C3-207ENST00000451088 SSPOA2VEC9 5147 aa2.18□□□□□ -2.06
GTF3C3-207ENST00000451088 KRTAP25-1Q3LHN0 102 aa2.17□□□□□ -2.06
GTF3C3-207ENST00000451088 KRTAP6-3Q3LI67 103 aa2.17□□□□□ -2.06
GTF3C3-207ENST00000451088 SYNE2Q8WXH0 6885 aaKnown RBP2.17□□□□□ -2.06
GTF3C3-207ENST00000451088 K7EQZ3 153 aa2.16□□□□□ -2.06
GTF3C3-207ENST00000451088 SPRR1BP22528 89 aa2.16□□□□□ -2.06
GTF3C3-207ENST00000451088 KRTAP19-2Q3LHN2 52 aa2.16□□□□□ -2.06
GTF3C3-207ENST00000451088 KRTAP20-1Q3LI63 56 aa2.16□□□□□ -2.06
GTF3C3-207ENST00000451088 TP53AIP1Q9HCN2 124 aa2.16□□□□□ -2.06
GTF3C3-207ENST00000451088 K7ERS5 55 aa2.15□□□□□ -2.07
GTF3C3-207ENST00000451088 DMAC1Q96GE9 116 aa2.15□□□□□ -2.07
GTF3C3-207ENST00000451088 MUC19Q7Z5P9 8384 aa2.15□□□□□ -2.07
GTF3C3-207ENST00000451088 M0R2T5 61 aa2.14□□□□□ -2.07
GTF3C3-207ENST00000451088 P0C880 135 aa2.13□□□□□ -2.07
GTF3C3-207ENST00000451088 HRES1P13985 223 aa2.13□□□□□ -2.07
GTF3C3-207ENST00000451088 DEFB105AQ8NG35 78 aa2.13□□□□□ -2.07
GTF3C3-207ENST00000451088 USH2AO75445 5202 aa2.12□□□□□ -2.07
GTF3C3-207ENST00000451088 A0A1B0GU69 56 aa2.12□□□□□ -2.07
GTF3C3-207ENST00000451088 C9orf92A6NGG3 77 aa2.12□□□□□ -2.07
GTF3C3-207ENST00000451088 A8MWP4 228 aa2.12□□□□□ -2.07
GTF3C3-207ENST00000451088 C20orf166-AS1Q96NR2 134 aa2.12□□□□□ -2.07
GTF3C3-207ENST00000451088 MACF1Q9UPN3 7388 aaKnown RBP2.12□□□□□ -2.07
GTF3C3-207ENST00000451088 ACYP2P14621 99 aa2.11□□□□□ -2.07
GTF3C3-207ENST00000451088 PCOTHQ58A44 107 aa2.11□□□□□ -2.07
GTF3C3-207ENST00000451088 IGFL1Q6UW32 110 aa2.11□□□□□ -2.07
GTF3C3-207ENST00000451088 COX6B2Q6YFQ2 88 aa2.11□□□□□ -2.07
GTF3C3-207ENST00000451088 LUZP6Q538Z0 58 aa2.1□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms