RNA–Protein interactions for RNA: ENST00000450533.5

TTC3-210, Transcript of tetratricopeptide repeat domain 3, humanhuman

TSL 1 (best)

Gene TTC3, Length 2,451 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3-210ENST00000450533 A0A1B0GU33 70 aa11.58□□□□□ -0.56
TTC3-210ENST00000450533 H1FX-AS1Q4G0G2 97 aa11.52□□□□□ -0.56
TTC3-210ENST00000450533 RYR1P21817 5038 aa11.52□□□□□ -0.56
TTC3-210ENST00000450533 KRTAP17-1Q9BYP8 105 aa11.5□□□□□ -0.57
TTC3-210ENST00000450533 RPL37P61927 97 aaKnown RBP11.49□□□□□ -0.57
TTC3-210ENST00000450533 XP32Q5T750 250 aa11.47□□□□□ -0.57
TTC3-210ENST00000450533 KIAA1109Q2LD37 5005 aa11.44□□□□□ -0.58
TTC3-210ENST00000450533 CSAG1Q6PB30 78 aa11.37□□□□□ -0.59
TTC3-210ENST00000450533 KRTAP3-3Q9BYR6 98 aa11.37□□□□□ -0.59
TTC3-210ENST00000450533 MT1HL1P0DM35 61 aa11.31□□□□□ -0.6
TTC3-210ENST00000450533 LPAP08519 4548 aa11.26□□□□□ -0.61
TTC3-210ENST00000450533 KRTAP10-6P60371 365 aaPredicted RBP11.26□□□□□ -0.61
TTC3-210ENST00000450533 S4R3F8 94 aa11.26□□□□□ -0.61
TTC3-210ENST00000450533 LINC01554Q52M75 96 aa11.24□□□□□ -0.61
TTC3-210ENST00000450533 LRP2P98164 4655 aa11.18□□□□□ -0.62
TTC3-210ENST00000450533 KRTAP3-2Q9BYR7 98 aa11.18□□□□□ -0.62
TTC3-210ENST00000450533 KRTAP13-4Q3LI77 160 aa11.17□□□□□ -0.62
TTC3-210ENST00000450533 EPPK1P58107 5090 aaKnown RBP11.17□□□□□ -0.62
TTC3-210ENST00000450533 K7ERS5 55 aa11.14□□□□□ -0.63
TTC3-210ENST00000450533 A0A0D9SG42 100 aa11.12□□□□□ -0.63
TTC3-210ENST00000450533 P0C880 135 aa11.09□□□□□ -0.63
TTC3-210ENST00000450533 ABCA13Q86UQ4 5058 aa11.04□□□□□ -0.64
TTC3-210ENST00000450533 CRIPTQ9P021 101 aa11.03□□□□□ -0.64
TTC3-210ENST00000450533 KRTAP25-1Q3LHN0 102 aa11.02□□□□□ -0.64
TTC3-210ENST00000450533 TPRXLQ17RH7 258 aa11□□□□□ -0.65
TTC3-210ENST00000450533 KRTAP4-5Q9BYR2 181 aa10.92□□□□□ -0.66
TTC3-210ENST00000450533 ROMO1P60602 79 aa10.91□□□□□ -0.66
TTC3-210ENST00000450533 KRTAP12-2P59991 146 aa10.8□□□□□ -0.68
TTC3-210ENST00000450533 SPINT4Q6UDR6 99 aa10.73□□□□□ -0.69
TTC3-210ENST00000450533 KRTAP12-1P59990 96 aa10.7□□□□□ -0.7
TTC3-210ENST00000450533 MUC17Q685J3 4493 aa10.64□□□□□ -0.71
TTC3-210ENST00000450533 M0QZ58 72 aa10.63□□□□□ -0.71
TTC3-210ENST00000450533 C10orf95Q9H7T3 257 aa10.63□□□□□ -0.71
TTC3-210ENST00000450533 SEC61BP60468 96 aaKnown RBP10.59□□□□□ -0.71
TTC3-210ENST00000450533 KRTAP4-1Q9BYQ7 146 aa10.56□□□□□ -0.72
TTC3-210ENST00000450533 HERC2O95714 4834 aa10.54□□□□□ -0.72
TTC3-210ENST00000450533 J3QL48 77 aa10.53□□□□□ -0.72
TTC3-210ENST00000450533 R4GN34 69 aa10.47□□□□□ -0.73
TTC3-210ENST00000450533 LORP23490 312 aaPredicted RBP10.41□□□□□ -0.74
TTC3-210ENST00000450533 MUC2Q02817 5179 aa10.37□□□□□ -0.75
TTC3-210ENST00000450533 KRTAP19-2Q3LHN2 52 aa10.31□□□□□ -0.76
TTC3-210ENST00000450533 H3BS24 57 aa10.16□□□□□ -0.78
TTC3-210ENST00000450533 BIRC6Q9NR09 4857 aa10.15□□□□□ -0.79
TTC3-210ENST00000450533 HERC1Q15751 4861 aa10.09□□□□□ -0.79
TTC3-210ENST00000450533 FLGP20930 4061 aaPredicted RBP10.08□□□□□ -0.8
TTC3-210ENST00000450533 KRTAP15-1Q3LI76 137 aa10.04□□□□□ -0.8
TTC3-210ENST00000450533 PCLOQ9Y6V0 5065 aa10□□□□□ -0.81
TTC3-210ENST00000450533 HMCN2Q8NDA2 5059 aa9.96□□□□□ -0.82
TTC3-210ENST00000450533 CAMK2N1Q7Z7J9 78 aa9.94□□□□□ -0.82
TTC3-210ENST00000450533 FAT4Q6V0I7 4981 aa9.88□□□□□ -0.83
TTC3-210ENST00000450533 NDUFAF8A1L188 74 aa9.8□□□□□ -0.84
TTC3-210ENST00000450533 LCE2CQ5TA81 110 aa9.72□□□□□ -0.85
TTC3-210ENST00000450533 PLAC4Q8WY50 150 aa9.66□□□□□ -0.86
TTC3-210ENST00000450533 RNF213Q63HN8 5207 aa9.63□□□□□ -0.87
TTC3-210ENST00000450533 PP632Q6XCG6 107 aa9.61□□□□□ -0.87
TTC3-210ENST00000450533 UBR4Q5T4S7 5183 aa9.59□□□□□ -0.87
TTC3-210ENST00000450533 M0R2T5 61 aa9.56□□□□□ -0.88
TTC3-210ENST00000450533 TNP1P09430 55 aa9.51□□□□□ -0.89
TTC3-210ENST00000450533 KRTAP19-1Q8IUB9 90 aa9.47□□□□□ -0.89
TTC3-210ENST00000450533 SPRR2GQ9BYE4 73 aa9.47□□□□□ -0.89
TTC3-210ENST00000450533 MT1HP80294 61 aa9.46□□□□□ -0.89
TTC3-210ENST00000450533 MT1FP04733 61 aa9.33□□□□□ -0.92
TTC3-210ENST00000450533 KRTAP10-10P60014 251 aa9.32□□□□□ -0.92
TTC3-210ENST00000450533 MT2AP02795 61 aa9.31□□□□□ -0.92
TTC3-210ENST00000450533 KRTAP23-1A1A580 65 aa9.26□□□□□ -0.93
TTC3-210ENST00000450533 KRTAP9-8Q9BYQ0 159 aa9.24□□□□□ -0.93
TTC3-210ENST00000450533 LUZP6Q538Z0 58 aa9.17□□□□□ -0.94
TTC3-210ENST00000450533 LCE3AQ5TA76 89 aa9.08□□□□□ -0.96
TTC3-210ENST00000450533 KRTAP19-8Q3LI54 63 aa9.04□□□□□ -0.96
TTC3-210ENST00000450533 MT1BP07438 61 aa8.99□□□□□ -0.97
TTC3-210ENST00000450533 SPRR5A0A1B0GTR4 108 aa8.95□□□□□ -0.98
TTC3-210ENST00000450533 KRTAP10-5P60370 271 aa8.93□□□□□ -0.98
TTC3-210ENST00000450533 MT1XP80297 61 aa8.91□□□□□ -0.98
TTC3-210ENST00000450533 KRTAP9-3Q9BYQ3 159 aa8.84□□□□□ -0.99
TTC3-210ENST00000450533 KRTAP8-1Q8IUC2 63 aa8.77□□□□□ -1.01
TTC3-210ENST00000450533 KRTAP10-12P60413 245 aa8.72□□□□□ -1.01
TTC3-210ENST00000450533 KRTAP10-7P60409 375 aaPredicted RBP8.7□□□□□ -1.02
TTC3-210ENST00000450533 KRTAP12-3P60328 96 aa8.62□□□□□ -1.03
TTC3-210ENST00000450533 A0A0A0MQY5 61 aa8.61□□□□□ -1.03
TTC3-210ENST00000450533 USH2AO75445 5202 aa8.58□□□□□ -1.04
TTC3-210ENST00000450533 LCE2BO14633 110 aa8.54□□□□□ -1.04
TTC3-210ENST00000450533 PRO2289Q9P1D8 64 aa8.54□□□□□ -1.04
TTC3-210ENST00000450533 KMT2DO14686 5537 aa8.41□□□□□ -1.06
TTC3-210ENST00000450533 LCE2AQ5TA79 106 aaPredicted RBP8.36□□□□□ -1.07
TTC3-210ENST00000450533 KRTAP19-5Q3LI72 72 aa8.31□□□□□ -1.08
TTC3-210ENST00000450533 KRTAP4-8A0A0G2JLE6 195 aa8.21□□□□□ -1.09
TTC3-210ENST00000450533 KRTAP4-8Q9BYQ9 185 aa8.21□□□□□ -1.09
TTC3-210ENST00000450533 LCE3CQ5T5A8 94 aa8.1□□□□□ -1.11
TTC3-210ENST00000450533 KRTAP19-7Q3SYF9 63 aa7.94□□□□□ -1.14
TTC3-210ENST00000450533 SSPOA2VEC9 5147 aa7.89□□□□□ -1.15
TTC3-210ENST00000450533 KRTAP9-6A8MVA2 160 aa7.86□□□□□ -1.15
TTC3-210ENST00000450533 KRTAP4-7Q9BYR0 210 aa7.85□□□□□ -1.15
TTC3-210ENST00000450533 FSIP2Q5CZC0 6907 aa7.82□□□□□ -1.16
TTC3-210ENST00000450533 INE1O15225 51 aa7.77□□□□□ -1.17
TTC3-210ENST00000450533 MT1EP04732 61 aa7.71□□□□□ -1.18
TTC3-210ENST00000450533 MT1LQ93083 61 aa7.7□□□□□ -1.18
TTC3-210ENST00000450533 KRTAP19-6Q3LI70 58 aa7.6□□□□□ -1.19
TTC3-210ENST00000450533 KRTAP19-4Q3LI73 84 aa7.5□□□□□ -1.21
TTC3-210ENST00000450533 FCGBPQ9Y6R7 5405 aaPredicted RBP7.48□□□□□ -1.21
TTC3-210ENST00000450533 KRTAP2-3P0C7H8 128 aa7.47□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms