RNA–Protein interactions for RNA: ENST00000449234.1

RFX3-208, Transcript of regulatory factor X3, humanhuman

TSL 3

Gene RFX3, Length 633 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-208ENST00000449234 KRTAP10-4P60372 401 aaPredicted RBP6.28□□□□□ -1.4
RFX3-208ENST00000449234 KRTAP4-5Q9BYR2 181 aa6.27□□□□□ -1.41
RFX3-208ENST00000449234 FAT2Q9NYQ8 4349 aa6.26□□□□□ -1.41
RFX3-208ENST00000449234 MIR22HGQ0VDD5 57 aa6.26□□□□□ -1.41
RFX3-208ENST00000449234 DNHD1Q96M86 4753 aa6.23□□□□□ -1.41
RFX3-208ENST00000449234 SMR3BP02814 79 aaPredicted RBP6.22□□□□□ -1.41
RFX3-208ENST00000449234 KRTAP3-1Q9BYR8 98 aa6.22□□□□□ -1.41
RFX3-208ENST00000449234 VPS13BQ7Z7G8 4022 aa6.2□□□□□ -1.42
RFX3-208ENST00000449234 Q8N1X5 172 aa6.18□□□□□ -1.42
RFX3-208ENST00000449234 C9orf92A6NGG3 77 aa6.15□□□□□ -1.42
RFX3-208ENST00000449234 RBM12B-AS1Q9P1G2 102 aa6.15□□□□□ -1.42
RFX3-208ENST00000449234 HYDINQ4G0P3 5121 aa6.15□□□□□ -1.43
RFX3-208ENST00000449234 COX6B2Q6YFQ2 88 aa6.14□□□□□ -1.43
RFX3-208ENST00000449234 KRTAP10-8P60410 259 aa6.13□□□□□ -1.43
RFX3-208ENST00000449234 DYNC1H1Q14204 4646 aaKnown RBP6.12□□□□□ -1.43
RFX3-208ENST00000449234 PKHD1L1Q86WI1 4243 aa6.07□□□□□ -1.44
RFX3-208ENST00000449234 A0A1B0GU33 70 aa6.07□□□□□ -1.44
RFX3-208ENST00000449234 APOBP04114 4563 aaKnown RBP6.06□□□□□ -1.44
RFX3-208ENST00000449234 H1FX-AS1Q4G0G2 97 aa6.04□□□□□ -1.44
RFX3-208ENST00000449234 RPL37P61927 97 aaKnown RBP6.03□□□□□ -1.44
RFX3-208ENST00000449234 PKHD1P08F94 4074 aa6□□□□□ -1.45
RFX3-208ENST00000449234 H0YAA0 97 aa5.98□□□□□ -1.45
RFX3-208ENST00000449234 Q5VSD8 79 aa5.97□□□□□ -1.45
RFX3-208ENST00000449234 FLG2Q5D862 2391 aaPredicted RBP5.97□□□□□ -1.45
RFX3-208ENST00000449234 K7ERS5 55 aa5.96□□□□□ -1.46
RFX3-208ENST00000449234 PRAC1Q96KF2 57 aa5.93□□□□□ -1.46
RFX3-208ENST00000449234 RYR2Q92736 4967 aa5.9□□□□□ -1.46
RFX3-208ENST00000449234 LINC01554Q52M75 96 aa5.9□□□□□ -1.46
RFX3-208ENST00000449234 ADM2Q7Z4H4 148 aa5.9□□□□□ -1.46
RFX3-208ENST00000449234 FAT1Q14517 4588 aa5.89□□□□□ -1.47
RFX3-208ENST00000449234 KRTAP23-1A1A580 65 aa5.87□□□□□ -1.47
RFX3-208ENST00000449234 S4R3F8 94 aa5.87□□□□□ -1.47
RFX3-208ENST00000449234 FAT3Q8TDW7 4589 aa5.85□□□□□ -1.47
RFX3-208ENST00000449234 CSAG1Q6PB30 78 aa5.85□□□□□ -1.47
RFX3-208ENST00000449234 KRTAP10-6P60371 365 aaPredicted RBP5.84□□□□□ -1.47
RFX3-208ENST00000449234 TNXBP22105 4242 aa5.83□□□□□ -1.48
RFX3-208ENST00000449234 MT1HL1P0DM35 61 aa5.83□□□□□ -1.48
RFX3-208ENST00000449234 TPRXLQ17RH7 258 aa5.81□□□□□ -1.48
RFX3-208ENST00000449234 KRTAP25-1Q3LHN0 102 aa5.79□□□□□ -1.48
RFX3-208ENST00000449234 HSPG2P98160 4391 aa5.77□□□□□ -1.49
RFX3-208ENST00000449234 ROMO1P60602 79 aa5.75□□□□□ -1.49
RFX3-208ENST00000449234 RYR1P21817 5038 aa5.72□□□□□ -1.49
RFX3-208ENST00000449234 KRTAP17-1Q9BYP8 105 aa5.72□□□□□ -1.49
RFX3-208ENST00000449234 LRP1Q07954 4544 aaKnown RBP5.72□□□□□ -1.49
RFX3-208ENST00000449234 M0QZ58 72 aa5.69□□□□□ -1.5
RFX3-208ENST00000449234 KRTAP13-4Q3LI77 160 aa5.68□□□□□ -1.5
RFX3-208ENST00000449234 DMBT1Q9UGM3 2413 aaPredicted RBP5.67□□□□□ -1.5
RFX3-208ENST00000449234 P0C880 135 aa5.66□□□□□ -1.5
RFX3-208ENST00000449234 SEC61BP60468 96 aaKnown RBP5.63□□□□□ -1.51
RFX3-208ENST00000449234 KMT2CQ8NEZ4 4911 aaKnown RBP5.61□□□□□ -1.51
RFX3-208ENST00000449234 KRTAP15-1Q3LI76 137 aa5.61□□□□□ -1.51
RFX3-208ENST00000449234 A0A0D9SG42 100 aa5.6□□□□□ -1.51
RFX3-208ENST00000449234 MYCBP2O75592 4640 aa5.59□□□□□ -1.52
RFX3-208ENST00000449234 KRTAP5-3Q6L8H2 238 aa5.57□□□□□ -1.52
RFX3-208ENST00000449234 KRTAP12-1P59990 96 aa5.56□□□□□ -1.52
RFX3-208ENST00000449234 CRIPTQ9P021 101 aa5.53□□□□□ -1.52
RFX3-208ENST00000449234 KRTAP12-2P59991 146 aa5.51□□□□□ -1.53
RFX3-208ENST00000449234 RYR3Q15413 4870 aa5.49□□□□□ -1.53
RFX3-208ENST00000449234 SPINT4Q6UDR6 99 aa5.49□□□□□ -1.53
RFX3-208ENST00000449234 KIAA1109Q2LD37 5005 aa5.45□□□□□ -1.54
RFX3-208ENST00000449234 R4GN34 69 aa5.43□□□□□ -1.54
RFX3-208ENST00000449234 LRP2P98164 4655 aa5.34□□□□□ -1.55
RFX3-208ENST00000449234 KRTAP19-2Q3LHN2 52 aa5.34□□□□□ -1.55
RFX3-208ENST00000449234 KRTAP4-1Q9BYQ7 146 aa5.33□□□□□ -1.56
RFX3-208ENST00000449234 C10orf95Q9H7T3 257 aa5.32□□□□□ -1.56
RFX3-208ENST00000449234 KRTAP9-8Q9BYQ0 159 aa5.27□□□□□ -1.57
RFX3-208ENST00000449234 MUC17Q685J3 4493 aa5.27□□□□□ -1.57
RFX3-208ENST00000449234 EPPK1P58107 5090 aaKnown RBP5.24□□□□□ -1.57
RFX3-208ENST00000449234 PP632Q6XCG6 107 aa5.22□□□□□ -1.57
RFX3-208ENST00000449234 LPAP08519 4548 aa5.19□□□□□ -1.58
RFX3-208ENST00000449234 ABCA13Q86UQ4 5058 aa5.16□□□□□ -1.58
RFX3-208ENST00000449234 CAMK2N1Q7Z7J9 78 aa5.14□□□□□ -1.59
RFX3-208ENST00000449234 HERC2O95714 4834 aa5.11□□□□□ -1.59
RFX3-208ENST00000449234 BIRC6Q9NR09 4857 aa5.08□□□□□ -1.6
RFX3-208ENST00000449234 FLGP20930 4061 aaPredicted RBP5.07□□□□□ -1.6
RFX3-208ENST00000449234 PLAC4Q8WY50 150 aa5.07□□□□□ -1.6
RFX3-208ENST00000449234 HERC1Q15751 4861 aa5.05□□□□□ -1.6
RFX3-208ENST00000449234 TNP1P09430 55 aa5.03□□□□□ -1.6
RFX3-208ENST00000449234 NDUFAF8A1L188 74 aa5□□□□□ -1.61
RFX3-208ENST00000449234 SPRR2GQ9BYE4 73 aa5□□□□□ -1.61
RFX3-208ENST00000449234 LCE1AQ5T7P2 110 aa4.95□□□□□ -1.62
RFX3-208ENST00000449234 LUZP6Q538Z0 58 aa4.86□□□□□ -1.63
RFX3-208ENST00000449234 M0R2T5 61 aa4.85□□□□□ -1.63
RFX3-208ENST00000449234 MT1HP80294 61 aa4.85□□□□□ -1.63
RFX3-208ENST00000449234 HMCN2Q8NDA2 5059 aa4.83□□□□□ -1.64
RFX3-208ENST00000449234 KRTAP19-8Q3LI54 63 aa4.82□□□□□ -1.64
RFX3-208ENST00000449234 SPRR5A0A1B0GTR4 108 aa4.79□□□□□ -1.64
RFX3-208ENST00000449234 MT2AP02795 61 aa4.79□□□□□ -1.64
RFX3-208ENST00000449234 KRTAP10-10P60014 251 aa4.78□□□□□ -1.64
RFX3-208ENST00000449234 MT1FP04733 61 aa4.74□□□□□ -1.65
RFX3-208ENST00000449234 PCLOQ9Y6V0 5065 aa4.7□□□□□ -1.66
RFX3-208ENST00000449234 KRTAP8-1Q8IUC2 63 aa4.67□□□□□ -1.66
RFX3-208ENST00000449234 MT1BP07438 61 aa4.64□□□□□ -1.67
RFX3-208ENST00000449234 LCE3AQ5TA76 89 aa4.64□□□□□ -1.67
RFX3-208ENST00000449234 A0A0A0MQY5 61 aa4.63□□□□□ -1.67
RFX3-208ENST00000449234 MUC2Q02817 5179 aa4.63□□□□□ -1.67
RFX3-208ENST00000449234 RNF213Q63HN8 5207 aa4.6□□□□□ -1.67
RFX3-208ENST00000449234 KRTAP10-5P60370 271 aa4.6□□□□□ -1.67
RFX3-208ENST00000449234 MT1XP80297 61 aa4.58□□□□□ -1.68
RFX3-208ENST00000449234 KRTAP2-2Q9BYT5 123 aa4.58□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms