RNA–Protein interactions for RNA: ENST00000449062.1

RTFDC1-204, Transcript of Protein RTF2 homolog, humanhuman

TSL 5

Gene RTFDC1, Length 852 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-204ENST00000449062 MT1BP07438 61 aa6.33□□□□□ -1.4
RTFDC1-204ENST00000449062 KRTAP19-8Q3LI54 63 aa6.33□□□□□ -1.4
RTFDC1-204ENST00000449062 SYNE2Q8WXH0 6885 aaKnown RBP6.32□□□□□ -1.4
RTFDC1-204ENST00000449062 OCR1Q9BZK8 76 aa6.32□□□□□ -1.4
RTFDC1-204ENST00000449062 KLKP1Q107X0 134 aa6.3□□□□□ -1.4
RTFDC1-204ENST00000449062 LINC00208Q96KT6 92 aa6.27□□□□□ -1.41
RTFDC1-204ENST00000449062 A8MUN3 132 aa6.23□□□□□ -1.41
RTFDC1-204ENST00000449062 Q5VV11 94 aa6.23□□□□□ -1.41
RTFDC1-204ENST00000449062 H0YAA0 97 aa6.22□□□□□ -1.41
RTFDC1-204ENST00000449062 J3QR89 54 aa6.22□□□□□ -1.41
RTFDC1-204ENST00000449062 NDUFC1O43677 76 aa6.21□□□□□ -1.42
RTFDC1-204ENST00000449062 MP68P56378 58 aa6.21□□□□□ -1.42
RTFDC1-204ENST00000449062 IMUPQ9GZP8 106 aa6.21□□□□□ -1.42
RTFDC1-204ENST00000449062 CRIPTQ9P021 101 aa6.21□□□□□ -1.42
RTFDC1-204ENST00000449062 KRTAP6-3Q3LI67 103 aa6.17□□□□□ -1.42
RTFDC1-204ENST00000449062 H3BPC8 53 aa6.16□□□□□ -1.42
RTFDC1-204ENST00000449062 A6NN06 94 aa6.15□□□□□ -1.42
RTFDC1-204ENST00000449062 KRTAP10-5P60370 271 aa6.15□□□□□ -1.42
RTFDC1-204ENST00000449062 KRTAP3-2Q9BYR7 98 aa6.13□□□□□ -1.43
RTFDC1-204ENST00000449062 SCGB1A1P11684 91 aa6.1□□□□□ -1.43
RTFDC1-204ENST00000449062 ADM2Q7Z4H4 148 aa6.1□□□□□ -1.43
RTFDC1-204ENST00000449062 DMAC1Q96GE9 116 aa6.09□□□□□ -1.43
RTFDC1-204ENST00000449062 MT-ATP8P03928 68 aa6.07□□□□□ -1.44
RTFDC1-204ENST00000449062 P0C880 135 aa6.02□□□□□ -1.45
RTFDC1-204ENST00000449062 K7ERU9 68 aa6.01□□□□□ -1.45
RTFDC1-204ENST00000449062 TRAV7A0A075B6U4 112 aa5.99□□□□□ -1.45
RTFDC1-204ENST00000449062 NEBP20929 6669 aa5.98□□□□□ -1.45
RTFDC1-204ENST00000449062 SMIM20Q8N5G0 67 aa5.97□□□□□ -1.45
RTFDC1-204ENST00000449062 MUC12Q9UKN1 5478 aa5.95□□□□□ -1.46
RTFDC1-204ENST00000449062 MT1XP80297 61 aa5.93□□□□□ -1.46
RTFDC1-204ENST00000449062 ACYP2P14621 99 aa5.92□□□□□ -1.46
RTFDC1-204ENST00000449062 KRTAP5-9P26371 169 aa5.92□□□□□ -1.46
RTFDC1-204ENST00000449062 R4GN34 69 aa5.92□□□□□ -1.46
RTFDC1-204ENST00000449062 KMT2DO14686 5537 aa5.92□□□□□ -1.46
RTFDC1-204ENST00000449062 C20orf197Q8N268 126 aa5.91□□□□□ -1.46
RTFDC1-204ENST00000449062 M0QZ58 72 aa5.88□□□□□ -1.47
RTFDC1-204ENST00000449062 PLAC4Q8WY50 150 aa5.88□□□□□ -1.47
RTFDC1-204ENST00000449062 SNURFQ9Y675 71 aa5.85□□□□□ -1.47
RTFDC1-204ENST00000449062 PRO2289Q9P1D8 64 aa5.84□□□□□ -1.47
RTFDC1-204ENST00000449062 MDN1Q9NU22 5596 aa5.82□□□□□ -1.48
RTFDC1-204ENST00000449062 SERP2Q8N6R1 65 aa5.8□□□□□ -1.48
RTFDC1-204ENST00000449062 SPANXA2-OT1Q8N9U9 137 aa5.8□□□□□ -1.48
RTFDC1-204ENST00000449062 SPTSSBQ8NFR3 76 aa5.79□□□□□ -1.48
RTFDC1-204ENST00000449062 KRTAP12-2P59991 146 aa5.77□□□□□ -1.49
RTFDC1-204ENST00000449062 LINC01554Q52M75 96 aa5.77□□□□□ -1.49
RTFDC1-204ENST00000449062 CHKB-CPT1BH3BT56 60 aa5.74□□□□□ -1.49
RTFDC1-204ENST00000449062 KRTAP4-8A0A0G2JLE6 195 aa5.67□□□□□ -1.5
RTFDC1-204ENST00000449062 SPRR2FQ96RM1 72 aa5.67□□□□□ -1.5
RTFDC1-204ENST00000449062 KRTAP4-8Q9BYQ9 185 aa5.67□□□□□ -1.5
RTFDC1-204ENST00000449062 KRTAP8-1Q8IUC2 63 aa5.66□□□□□ -1.5
RTFDC1-204ENST00000449062 KRTAP10-7P60409 375 aaPredicted RBP5.65□□□□□ -1.5
RTFDC1-204ENST00000449062 KRTAP13-4Q3LI77 160 aa5.65□□□□□ -1.5
RTFDC1-204ENST00000449062 KRTAP10-12P60413 245 aa5.64□□□□□ -1.51
RTFDC1-204ENST00000449062 KRTAP20-1Q3LI63 56 aa5.63□□□□□ -1.51
RTFDC1-204ENST00000449062 COX7CP15954 63 aa5.62□□□□□ -1.51
RTFDC1-204ENST00000449062 COA5Q86WW8 74 aa5.61□□□□□ -1.51
RTFDC1-204ENST00000449062 LCE1AQ5T7P2 110 aa5.58□□□□□ -1.52
RTFDC1-204ENST00000449062 CYSTM1Q9H1C7 97 aa5.58□□□□□ -1.52
RTFDC1-204ENST00000449062 SPRR2EP22531 72 aa5.57□□□□□ -1.52
RTFDC1-204ENST00000449062 SPRR2BP35325 72 aa5.57□□□□□ -1.52
RTFDC1-204ENST00000449062 SPRR2AP35326 72 aa5.57□□□□□ -1.52
RTFDC1-204ENST00000449062 H7BZZ5 65 aa5.56□□□□□ -1.52
RTFDC1-204ENST00000449062 KRTAP2-3P0C7H8 128 aa5.54□□□□□ -1.52
RTFDC1-204ENST00000449062 KRTAP2-4Q9BYR9 128 aa5.54□□□□□ -1.52
RTFDC1-204ENST00000449062 SERP1Q9Y6X1 66 aa5.44□□□□□ -1.54
RTFDC1-204ENST00000449062 SEC61GP60059 68 aa5.43□□□□□ -1.54
RTFDC1-204ENST00000449062 A0A1B0GU33 70 aa5.42□□□□□ -1.54
RTFDC1-204ENST00000449062 SPATA8Q6RVD6 105 aa5.42□□□□□ -1.54
RTFDC1-204ENST00000449062 CAMK2N1Q7Z7J9 78 aa5.42□□□□□ -1.54
RTFDC1-204ENST00000449062 A0A0D9SG42 100 aa5.39□□□□□ -1.55
RTFDC1-204ENST00000449062 SPRR2DP22532 72 aa5.38□□□□□ -1.55
RTFDC1-204ENST00000449062 ANAPC13Q9BS18 74 aa5.38□□□□□ -1.55
RTFDC1-204ENST00000449062 KRTAP2-2Q9BYT5 123 aa5.37□□□□□ -1.55
RTFDC1-204ENST00000449062 KRTAP2-1Q9BYU5 128 aa5.37□□□□□ -1.55
RTFDC1-204ENST00000449062 KRTAP12-1P59990 96 aa5.35□□□□□ -1.55
RTFDC1-204ENST00000449062 CCDC179H3BU77 68 aa5.34□□□□□ -1.55
RTFDC1-204ENST00000449062 KRTAP19-7Q3SYF9 63 aa5.32□□□□□ -1.56
RTFDC1-204ENST00000449062 SPINT4Q6UDR6 99 aa5.3□□□□□ -1.56
RTFDC1-204ENST00000449062 A0A1B0GU69 56 aa5.28□□□□□ -1.56
RTFDC1-204ENST00000449062 MT1EP04732 61 aa5.25□□□□□ -1.57
RTFDC1-204ENST00000449062 LCE3BQ5TA77 95 aa5.25□□□□□ -1.57
RTFDC1-204ENST00000449062 SMIM26A0A096LP01 95 aa5.23□□□□□ -1.57
RTFDC1-204ENST00000449062 A8MU10 97 aa5.23□□□□□ -1.57
RTFDC1-204ENST00000449062 LCE5AQ5TCM9 118 aa5.23□□□□□ -1.57
RTFDC1-204ENST00000449062 ATP5EP56381 51 aaPredicted RBP5.2□□□□□ -1.58
RTFDC1-204ENST00000449062 KRTAP19-3Q7Z4W3 81 aa5.18□□□□□ -1.58
RTFDC1-204ENST00000449062 KRTAP19-5Q3LI72 72 aa5.16□□□□□ -1.58
RTFDC1-204ENST00000449062 LINC01558Q9Y6Z2 57 aa5.16□□□□□ -1.58
RTFDC1-204ENST00000449062 C10orf95Q9H7T3 257 aa5.14□□□□□ -1.59
RTFDC1-204ENST00000449062 DSTQ03001 7570 aaKnown RBP5.14□□□□□ -1.59
RTFDC1-204ENST00000449062 PRR15LQ9BU68 103 aa5.1□□□□□ -1.59
RTFDC1-204ENST00000449062 TMEM258P61165 79 aa5.09□□□□□ -1.59
RTFDC1-204ENST00000449062 MT1GP13640 62 aa5.08□□□□□ -1.6
RTFDC1-204ENST00000449062 LCE3AQ5TA76 89 aa5.04□□□□□ -1.6
RTFDC1-204ENST00000449062 TNP1P09430 55 aa5.03□□□□□ -1.6
RTFDC1-204ENST00000449062 MT1LQ93083 61 aa5.03□□□□□ -1.6
RTFDC1-204ENST00000449062 MT1MQ8N339 61 aa4.99□□□□□ -1.61
RTFDC1-204ENST00000449062 UQCR11O14957 56 aa4.98□□□□□ -1.61
RTFDC1-204ENST00000449062 PP632Q6XCG6 107 aa4.96□□□□□ -1.62
RTFDC1-204ENST00000449062 KRTAP4-9Q9BYQ8 210 aa4.9□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 74 ms