RNA–Protein interactions for RNA: ENST00000448404.5

SF1-211, Transcript of splicing factor 1, humanhuman

TSL 1 (best)

Gene SF1, Length 2,778 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-211ENST00000448404 RPS29P62273 56 aaKnown RBP7.96□□□□□ -1.13
SF1-211ENST00000448404 LPAP08519 4548 aa7.95□□□□□ -1.14
SF1-211ENST00000448404 A8MUU9 505 aa7.93□□□□□ -1.14
SF1-211ENST00000448404 C20orf166-AS1Q96NR2 134 aa7.92□□□□□ -1.14
SF1-211ENST00000448404 ABCA13Q86UQ4 5058 aa7.91□□□□□ -1.14
SF1-211ENST00000448404 KRTAP3-1Q9BYR8 98 aa7.9□□□□□ -1.14
SF1-211ENST00000448404 KRTAP10-8P60410 259 aa7.87□□□□□ -1.15
SF1-211ENST00000448404 LRP2P98164 4655 aa7.86□□□□□ -1.15
SF1-211ENST00000448404 KRTAP4-5Q9BYR2 181 aa7.78□□□□□ -1.16
SF1-211ENST00000448404 MT1HL1P0DM35 61 aa7.76□□□□□ -1.17
SF1-211ENST00000448404 XP32Q5T750 250 aa7.74□□□□□ -1.17
SF1-211ENST00000448404 H0YAA0 97 aa7.68□□□□□ -1.18
SF1-211ENST00000448404 KRTAP25-1Q3LHN0 102 aa7.66□□□□□ -1.18
SF1-211ENST00000448404 RPL37P61927 97 aaKnown RBP7.65□□□□□ -1.18
SF1-211ENST00000448404 CRIPTQ9P021 101 aa7.65□□□□□ -1.18
SF1-211ENST00000448404 COX6B2Q6YFQ2 88 aa7.65□□□□□ -1.18
SF1-211ENST00000448404 ROMO1P60602 79 aa7.64□□□□□ -1.19
SF1-211ENST00000448404 HERC2O95714 4834 aa7.58□□□□□ -1.2
SF1-211ENST00000448404 A0A1B0GU33 70 aa7.56□□□□□ -1.2
SF1-211ENST00000448404 KRTAP3-3Q9BYR6 98 aa7.55□□□□□ -1.2
SF1-211ENST00000448404 MUC2Q02817 5179 aa7.53□□□□□ -1.2
SF1-211ENST00000448404 H1FX-AS1Q4G0G2 97 aa7.48□□□□□ -1.21
SF1-211ENST00000448404 P0C880 135 aa7.46□□□□□ -1.21
SF1-211ENST00000448404 S4R3F8 94 aa7.43□□□□□ -1.22
SF1-211ENST00000448404 KRTAP13-4Q3LI77 160 aa7.42□□□□□ -1.22
SF1-211ENST00000448404 KRTAP10-6P60371 365 aaPredicted RBP7.41□□□□□ -1.22
SF1-211ENST00000448404 A0A0D9SG42 100 aa7.4□□□□□ -1.22
SF1-211ENST00000448404 K7ERS5 55 aa7.4□□□□□ -1.22
SF1-211ENST00000448404 HERC1Q15751 4861 aa7.39□□□□□ -1.23
SF1-211ENST00000448404 KRTAP3-2Q9BYR7 98 aa7.37□□□□□ -1.23
SF1-211ENST00000448404 TPRXLQ17RH7 258 aa7.37□□□□□ -1.23
SF1-211ENST00000448404 PCLOQ9Y6V0 5065 aa7.36□□□□□ -1.23
SF1-211ENST00000448404 J3QL48 77 aa7.31□□□□□ -1.24
SF1-211ENST00000448404 SPINT4Q6UDR6 99 aa7.31□□□□□ -1.24
SF1-211ENST00000448404 KRTAP4-1Q9BYQ7 146 aa7.31□□□□□ -1.24
SF1-211ENST00000448404 MUC17Q685J3 4493 aa7.3□□□□□ -1.24
SF1-211ENST00000448404 BIRC6Q9NR09 4857 aa7.3□□□□□ -1.24
SF1-211ENST00000448404 C10orf95Q9H7T3 257 aa7.24□□□□□ -1.25
SF1-211ENST00000448404 NDUFAF8A1L188 74 aa7.19□□□□□ -1.26
SF1-211ENST00000448404 FAT4Q6V0I7 4981 aa7.17□□□□□ -1.26
SF1-211ENST00000448404 RNF213Q63HN8 5207 aa7.12□□□□□ -1.27
SF1-211ENST00000448404 KRTAP12-2P59991 146 aa7.12□□□□□ -1.27
SF1-211ENST00000448404 SEC61BP60468 96 aaKnown RBP7.09□□□□□ -1.27
SF1-211ENST00000448404 LORP23490 312 aaPredicted RBP7.09□□□□□ -1.27
SF1-211ENST00000448404 HMCN2Q8NDA2 5059 aa7.09□□□□□ -1.27
SF1-211ENST00000448404 KRTAP15-1Q3LI76 137 aa7.08□□□□□ -1.28
SF1-211ENST00000448404 UBR4Q5T4S7 5183 aa7.03□□□□□ -1.28
SF1-211ENST00000448404 KRTAP12-1P59990 96 aa7.01□□□□□ -1.29
SF1-211ENST00000448404 KRTAP19-2Q3LHN2 52 aa7□□□□□ -1.29
SF1-211ENST00000448404 M0QZ58 72 aa6.99□□□□□ -1.29
SF1-211ENST00000448404 R4GN34 69 aa6.93□□□□□ -1.3
SF1-211ENST00000448404 FLGP20930 4061 aaPredicted RBP6.89□□□□□ -1.31
SF1-211ENST00000448404 A0A0A0MQY5 61 aa6.86□□□□□ -1.31
SF1-211ENST00000448404 LCE2CQ5TA81 110 aa6.69□□□□□ -1.34
SF1-211ENST00000448404 LUZP6Q538Z0 58 aa6.67□□□□□ -1.34
SF1-211ENST00000448404 PLAC4Q8WY50 150 aa6.61□□□□□ -1.35
SF1-211ENST00000448404 M0R2T5 61 aa6.6□□□□□ -1.35
SF1-211ENST00000448404 CAMK2N1Q7Z7J9 78 aa6.58□□□□□ -1.36
SF1-211ENST00000448404 MT1HP80294 61 aa6.52□□□□□ -1.37
SF1-211ENST00000448404 KRTAP19-1Q8IUB9 90 aa6.42□□□□□ -1.38
SF1-211ENST00000448404 MT1FP04733 61 aa6.41□□□□□ -1.38
SF1-211ENST00000448404 KRTAP10-10P60014 251 aa6.39□□□□□ -1.39
SF1-211ENST00000448404 MT2AP02795 61 aa6.37□□□□□ -1.39
SF1-211ENST00000448404 KRTAP9-8Q9BYQ0 159 aa6.34□□□□□ -1.4
SF1-211ENST00000448404 USH2AO75445 5202 aa6.33□□□□□ -1.4
SF1-211ENST00000448404 SPRR2GQ9BYE4 73 aa6.3□□□□□ -1.4
SF1-211ENST00000448404 PP632Q6XCG6 107 aa6.22□□□□□ -1.41
SF1-211ENST00000448404 TNP1P09430 55 aa6.19□□□□□ -1.42
SF1-211ENST00000448404 MT1BP07438 61 aa6.11□□□□□ -1.43
SF1-211ENST00000448404 KMT2DO14686 5537 aa6.1□□□□□ -1.43
SF1-211ENST00000448404 LCE3AQ5TA76 89 aa6.06□□□□□ -1.44
SF1-211ENST00000448404 KRTAP9-3Q9BYQ3 159 aa6.05□□□□□ -1.44
SF1-211ENST00000448404 KRTAP10-5P60370 271 aa6.02□□□□□ -1.45
SF1-211ENST00000448404 MT1XP80297 61 aa6.02□□□□□ -1.45
SF1-211ENST00000448404 KRTAP19-8Q3LI54 63 aa6.02□□□□□ -1.45
SF1-211ENST00000448404 FSIP2Q5CZC0 6907 aa5.99□□□□□ -1.45
SF1-211ENST00000448404 SPRR5A0A1B0GTR4 108 aa5.96□□□□□ -1.46
SF1-211ENST00000448404 LCE2BO14633 110 aa5.94□□□□□ -1.46
SF1-211ENST00000448404 KRTAP10-7P60409 375 aaPredicted RBP5.93□□□□□ -1.46
SF1-211ENST00000448404 LCE2AQ5TA79 106 aaPredicted RBP5.84□□□□□ -1.47
SF1-211ENST00000448404 KRTAP23-1A1A580 65 aa5.82□□□□□ -1.48
SF1-211ENST00000448404 PRO2289Q9P1D8 64 aa5.81□□□□□ -1.48
SF1-211ENST00000448404 KRTAP10-12P60413 245 aa5.8□□□□□ -1.48
SF1-211ENST00000448404 KRTAP8-1Q8IUC2 63 aa5.72□□□□□ -1.49
SF1-211ENST00000448404 KRTAP4-8A0A0G2JLE6 195 aa5.72□□□□□ -1.49
SF1-211ENST00000448404 KRTAP4-8Q9BYQ9 185 aa5.72□□□□□ -1.49
SF1-211ENST00000448404 SSPOA2VEC9 5147 aa5.71□□□□□ -1.5
SF1-211ENST00000448404 KRTAP12-3P60328 96 aa5.7□□□□□ -1.5
SF1-211ENST00000448404 INE1O15225 51 aa5.62□□□□□ -1.51
SF1-211ENST00000448404 KRTAP19-5Q3LI72 72 aa5.61□□□□□ -1.51
SF1-211ENST00000448404 KRTAP4-7Q9BYR0 210 aa5.44□□□□□ -1.54
SF1-211ENST00000448404 FCGBPQ9Y6R7 5405 aaPredicted RBP5.43□□□□□ -1.54
SF1-211ENST00000448404 MUC12Q9UKN1 5478 aa5.41□□□□□ -1.54
SF1-211ENST00000448404 KRTAP19-7Q3SYF9 63 aa5.37□□□□□ -1.55
SF1-211ENST00000448404 LCE3CQ5T5A8 94 aa5.32□□□□□ -1.56
SF1-211ENST00000448404 KRTAP9-6A8MVA2 160 aa5.29□□□□□ -1.56
SF1-211ENST00000448404 DSTQ03001 7570 aaKnown RBP5.25□□□□□ -1.57
SF1-211ENST00000448404 KRTAP19-6Q3LI70 58 aa5.21□□□□□ -1.58
SF1-211ENST00000448404 MT1EP04732 61 aa5.19□□□□□ -1.58
SF1-211ENST00000448404 MT1LQ93083 61 aa5.16□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms