RNA–Protein interactions for RNA: ENST00000448136.5

SNHG16-201, Transcript of small nucleolar RNA host gene 16, humanhuman

TSL 1 (best) BASIC

Gene SNHG16, Length 3,607 nt, Biotype lincRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG16-201ENST00000448136 KRTAP10-1P60331 282 aa5.41□□□□□ -1.54
SNHG16-201ENST00000448136 NUPR2A6NF83 97 aa5.41□□□□□ -1.54
SNHG16-201ENST00000448136 COX6B2Q6YFQ2 88 aa5.41□□□□□ -1.54
SNHG16-201ENST00000448136 MYCBP2O75592 4640 aa5.41□□□□□ -1.54
SNHG16-201ENST00000448136 TPRXLQ17RH7 258 aa5.4□□□□□ -1.55
SNHG16-201ENST00000448136 LPAP08519 4548 aa5.39□□□□□ -1.55
SNHG16-201ENST00000448136 DYNC1H1Q14204 4646 aaKnown RBP5.39□□□□□ -1.55
SNHG16-201ENST00000448136 APOBP04114 4563 aaKnown RBP5.39□□□□□ -1.55
SNHG16-201ENST00000448136 KRTAP23-1A1A580 65 aa5.37□□□□□ -1.55
SNHG16-201ENST00000448136 PKHD1L1Q86WI1 4243 aa5.37□□□□□ -1.55
SNHG16-201ENST00000448136 K7ERS5 55 aa5.36□□□□□ -1.55
SNHG16-201ENST00000448136 LRP1Q07954 4544 aaKnown RBP5.35□□□□□ -1.55
SNHG16-201ENST00000448136 KRTAP13-4Q3LI77 160 aa5.35□□□□□ -1.55
SNHG16-201ENST00000448136 SMR3BP02814 79 aaPredicted RBP5.34□□□□□ -1.55
SNHG16-201ENST00000448136 RPL37P61927 97 aaKnown RBP5.25□□□□□ -1.57
SNHG16-201ENST00000448136 FAT3Q8TDW7 4589 aa5.25□□□□□ -1.57
SNHG16-201ENST00000448136 C20orf166-AS1Q96NR2 134 aa5.24□□□□□ -1.57
SNHG16-201ENST00000448136 KRTAP10-6P60371 365 aaPredicted RBP5.23□□□□□ -1.57
SNHG16-201ENST00000448136 TNXBP22105 4242 aa5.19□□□□□ -1.58
SNHG16-201ENST00000448136 KRTAP12-2P59991 146 aa5.19□□□□□ -1.58
SNHG16-201ENST00000448136 KRTAP15-1Q3LI76 137 aa5.19□□□□□ -1.58
SNHG16-201ENST00000448136 KMT2CQ8NEZ4 4911 aaKnown RBP5.18□□□□□ -1.58
SNHG16-201ENST00000448136 KRTAP10-8P60410 259 aa5.17□□□□□ -1.58
SNHG16-201ENST00000448136 S4R3F8 94 aa5.14□□□□□ -1.59
SNHG16-201ENST00000448136 SEC61BP60468 96 aaKnown RBP5.11□□□□□ -1.59
SNHG16-201ENST00000448136 LRP2P98164 4655 aa5.1□□□□□ -1.59
SNHG16-201ENST00000448136 KRTAP10-4P60372 401 aaPredicted RBP5.08□□□□□ -1.6
SNHG16-201ENST00000448136 RYR1P21817 5038 aa5.07□□□□□ -1.6
SNHG16-201ENST00000448136 KRTAP12-1P59990 96 aa5.03□□□□□ -1.6
SNHG16-201ENST00000448136 RPS29P62273 56 aaKnown RBP5.01□□□□□ -1.61
SNHG16-201ENST00000448136 XP32Q5T750 250 aa5.01□□□□□ -1.61
SNHG16-201ENST00000448136 ABCA13Q86UQ4 5058 aa4.98□□□□□ -1.61
SNHG16-201ENST00000448136 RYR2Q92736 4967 aa4.97□□□□□ -1.61
SNHG16-201ENST00000448136 LUZP6Q538Z0 58 aa4.95□□□□□ -1.62
SNHG16-201ENST00000448136 KRTAP17-1Q9BYP8 105 aa4.95□□□□□ -1.62
SNHG16-201ENST00000448136 RYR3Q15413 4870 aa4.88□□□□□ -1.63
SNHG16-201ENST00000448136 MUC2Q02817 5179 aa4.87□□□□□ -1.63
SNHG16-201ENST00000448136 KIAA1109Q2LD37 5005 aa4.86□□□□□ -1.63
SNHG16-201ENST00000448136 M0QZ58 72 aa4.86□□□□□ -1.63
SNHG16-201ENST00000448136 PLAC4Q8WY50 150 aa4.86□□□□□ -1.63
SNHG16-201ENST00000448136 A0A1B0GVY2 172 aa4.85□□□□□ -1.63
SNHG16-201ENST00000448136 KRTAP19-4Q3LI73 84 aa4.84□□□□□ -1.64
SNHG16-201ENST00000448136 R4GN34 69 aa4.78□□□□□ -1.64
SNHG16-201ENST00000448136 LOC100996750A0A140TA64 210 aa4.77□□□□□ -1.65
SNHG16-201ENST00000448136 KRTAP4-6Q9BYQ5 205 aa4.77□□□□□ -1.65
SNHG16-201ENST00000448136 EPPK1P58107 5090 aaKnown RBP4.76□□□□□ -1.65
SNHG16-201ENST00000448136 MUC17Q685J3 4493 aa4.76□□□□□ -1.65
SNHG16-201ENST00000448136 Q5VSD8 79 aa4.66□□□□□ -1.66
SNHG16-201ENST00000448136 MT1HL1P0DM35 61 aa4.65□□□□□ -1.66
SNHG16-201ENST00000448136 PCLOQ9Y6V0 5065 aa4.64□□□□□ -1.67
SNHG16-201ENST00000448136 CAMK2N1Q7Z7J9 78 aa4.64□□□□□ -1.67
SNHG16-201ENST00000448136 KRTAP21-3Q3LHN1 58 aa4.64□□□□□ -1.67
SNHG16-201ENST00000448136 LCE4AQ5TA78 99 aa4.64□□□□□ -1.67
SNHG16-201ENST00000448136 KRTAP19-1Q8IUB9 90 aa4.64□□□□□ -1.67
SNHG16-201ENST00000448136 KRTAP4-1Q9BYQ7 146 aa4.58□□□□□ -1.68
SNHG16-201ENST00000448136 KRTAP4-8Q9BYQ9 185 aa4.55□□□□□ -1.68
SNHG16-201ENST00000448136 KRTAP9-6A0A140TA67 174 aa4.55□□□□□ -1.68
SNHG16-201ENST00000448136 KRTAP9-7A8MTY7 169 aa4.55□□□□□ -1.68
SNHG16-201ENST00000448136 FAT4Q6V0I7 4981 aa4.55□□□□□ -1.68
SNHG16-201ENST00000448136 KRTAP4-12Q9BQ66 201 aa4.54□□□□□ -1.68
SNHG16-201ENST00000448136 KRTAP9-2Q9BYQ4 174 aa4.53□□□□□ -1.68
SNHG16-201ENST00000448136 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.52□□□□□ -1.69
SNHG16-201ENST00000448136 KRTAP4-5Q9BYR2 181 aa4.49□□□□□ -1.69
SNHG16-201ENST00000448136 FLGP20930 4061 aaPredicted RBP4.49□□□□□ -1.69
SNHG16-201ENST00000448136 KRTAP19-2Q3LHN2 52 aa4.45□□□□□ -1.7
SNHG16-201ENST00000448136 KRTAP9-4Q9BYQ2 154 aa4.42□□□□□ -1.7
SNHG16-201ENST00000448136 LCE3BQ5TA77 95 aa4.41□□□□□ -1.7
SNHG16-201ENST00000448136 PP632Q6XCG6 107 aa4.39□□□□□ -1.71
SNHG16-201ENST00000448136 HMCN2Q8NDA2 5059 aa4.35□□□□□ -1.71
SNHG16-201ENST00000448136 KRTAP9-9Q9BYP9 154 aa4.35□□□□□ -1.71
SNHG16-201ENST00000448136 TNP1P09430 55 aa4.35□□□□□ -1.71
SNHG16-201ENST00000448136 HERC1Q15751 4861 aa4.33□□□□□ -1.72
SNHG16-201ENST00000448136 HERC2O95714 4834 aa4.33□□□□□ -1.72
SNHG16-201ENST00000448136 RNF213Q63HN8 5207 aa4.32□□□□□ -1.72
SNHG16-201ENST00000448136 SPRR5A0A1B0GTR4 108 aa4.29□□□□□ -1.72
SNHG16-201ENST00000448136 UBR4Q5T4S7 5183 aa4.28□□□□□ -1.72
SNHG16-201ENST00000448136 KRTAP9-3Q9BYQ3 159 aa4.25□□□□□ -1.73
SNHG16-201ENST00000448136 LCE3AQ5TA76 89 aa4.21□□□□□ -1.74
SNHG16-201ENST00000448136 BIRC6Q9NR09 4857 aa4.2□□□□□ -1.74
SNHG16-201ENST00000448136 PRO2289Q9P1D8 64 aa4.14□□□□□ -1.75
SNHG16-201ENST00000448136 KMT2DO14686 5537 aa4.11□□□□□ -1.75
SNHG16-201ENST00000448136 LCE5AQ5TCM9 118 aa4.1□□□□□ -1.75
SNHG16-201ENST00000448136 KRTAP4-8A0A0G2JLE6 195 aa4.1□□□□□ -1.75
SNHG16-201ENST00000448136 LCE1DQ5T752 114 aa4.09□□□□□ -1.75
SNHG16-201ENST00000448136 M0R2T5 61 aa4.05□□□□□ -1.76
SNHG16-201ENST00000448136 USH2AO75445 5202 aa4.04□□□□□ -1.76
SNHG16-201ENST00000448136 SPRR2GQ9BYE4 73 aa4□□□□□ -1.77
SNHG16-201ENST00000448136 MT1FP04733 61 aa3.96□□□□□ -1.78
SNHG16-201ENST00000448136 KRTAP10-10P60014 251 aa3.94□□□□□ -1.78
SNHG16-201ENST00000448136 INE1O15225 51 aa3.94□□□□□ -1.78
SNHG16-201ENST00000448136 KRTAP12-3P60328 96 aa3.91□□□□□ -1.78
SNHG16-201ENST00000448136 KRTAP10-12P60413 245 aa3.91□□□□□ -1.78
SNHG16-201ENST00000448136 KRTAP10-5P60370 271 aa3.91□□□□□ -1.78
SNHG16-201ENST00000448136 KRTAP4-7Q9BYR0 210 aa3.91□□□□□ -1.78
SNHG16-201ENST00000448136 KRTAP4-9Q9BYQ8 210 aa3.91□□□□□ -1.78
SNHG16-201ENST00000448136 KRTAP8-1Q8IUC2 63 aa3.9□□□□□ -1.78
SNHG16-201ENST00000448136 KRTAP10-7P60409 375 aaPredicted RBP3.89□□□□□ -1.79
SNHG16-201ENST00000448136 MT1XP80297 61 aa3.89□□□□□ -1.79
SNHG16-201ENST00000448136 MT2AP02795 61 aa3.89□□□□□ -1.79
SNHG16-201ENST00000448136 MT1HP80294 61 aa3.88□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 75.4 ms