RNA–Protein interactions for RNA: ENST00000447868.5

UFD1-204, Transcript of ubiquitin recognition factor in ER associated degradation 1, humanhuman

TSL 3

Gene UFD1, Length 596 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFD1-204ENST00000447868 FCGBPQ9Y6R7 5405 aaPredicted RBP11.4□□□□□ -0.58
UFD1-204ENST00000447868 KRTAP9-1A8MXZ3 250 aaPredicted RBP11.36□□□□□ -0.59
UFD1-204ENST00000447868 KRTAP19-6Q3LI70 58 aa11.36□□□□□ -0.59
UFD1-204ENST00000447868 A8MUN3 132 aa11.35□□□□□ -0.59
UFD1-204ENST00000447868 K7ERU9 68 aa11.35□□□□□ -0.59
UFD1-204ENST00000447868 NDUFC1O43677 76 aa11.33□□□□□ -0.6
UFD1-204ENST00000447868 H3BPC8 53 aa11.32□□□□□ -0.6
UFD1-204ENST00000447868 MT-ATP8P03928 68 aa11.32□□□□□ -0.6
UFD1-204ENST00000447868 IMUPQ9GZP8 106 aa11.3□□□□□ -0.6
UFD1-204ENST00000447868 SPRR2GQ9BYE4 73 aa11.24□□□□□ -0.61
UFD1-204ENST00000447868 Q5VV11 94 aa11.16□□□□□ -0.62
UFD1-204ENST00000447868 KRTAP9-7A8MTY7 169 aa11.15□□□□□ -0.62
UFD1-204ENST00000447868 MT1BP07438 61 aa11.13□□□□□ -0.63
UFD1-204ENST00000447868 KRTAP19-8Q3LI54 63 aa11.13□□□□□ -0.63
UFD1-204ENST00000447868 H0YAA0 97 aa11.12□□□□□ -0.63
UFD1-204ENST00000447868 DMAC1Q96GE9 116 aa11.12□□□□□ -0.63
UFD1-204ENST00000447868 CRIPTQ9P021 101 aa11.12□□□□□ -0.63
UFD1-204ENST00000447868 TRAV7A0A075B6U4 112 aa11.11□□□□□ -0.63
UFD1-204ENST00000447868 SMIM20Q8N5G0 67 aa11.11□□□□□ -0.63
UFD1-204ENST00000447868 ADM2Q7Z4H4 148 aa11.09□□□□□ -0.63
UFD1-204ENST00000447868 MACF1Q9UPN3 7388 aaKnown RBP11.02□□□□□ -0.64
UFD1-204ENST00000447868 A6NN06 94 aa10.95□□□□□ -0.66
UFD1-204ENST00000447868 SNURFQ9Y675 71 aa10.91□□□□□ -0.66
UFD1-204ENST00000447868 ACYP2P14621 99 aa10.9□□□□□ -0.66
UFD1-204ENST00000447868 P0C880 135 aa10.85□□□□□ -0.67
UFD1-204ENST00000447868 SYNE2Q8WXH0 6885 aaKnown RBP10.84□□□□□ -0.67
UFD1-204ENST00000447868 KRTAP10-5P60370 271 aa10.83□□□□□ -0.68
UFD1-204ENST00000447868 C20orf197Q8N268 126 aa10.81□□□□□ -0.68
UFD1-204ENST00000447868 SERP2Q8N6R1 65 aa10.8□□□□□ -0.68
UFD1-204ENST00000447868 R4GN34 69 aa10.78□□□□□ -0.68
UFD1-204ENST00000447868 KRTAP3-2Q9BYR7 98 aa10.77□□□□□ -0.69
UFD1-204ENST00000447868 CHKB-CPT1BH3BT56 60 aa10.73□□□□□ -0.69
UFD1-204ENST00000447868 SPTSSBQ8NFR3 76 aa10.73□□□□□ -0.69
UFD1-204ENST00000447868 M0QZ58 72 aa10.71□□□□□ -0.69
UFD1-204ENST00000447868 SPANXA2-OT1Q8N9U9 137 aa10.68□□□□□ -0.7
UFD1-204ENST00000447868 KRTAP6-3Q3LI67 103 aa10.67□□□□□ -0.7
UFD1-204ENST00000447868 PLAC4Q8WY50 150 aa10.63□□□□□ -0.71
UFD1-204ENST00000447868 LINC01554Q52M75 96 aa10.58□□□□□ -0.72
UFD1-204ENST00000447868 COX7CP15954 63 aa10.52□□□□□ -0.73
UFD1-204ENST00000447868 MT1XP80297 61 aa10.5□□□□□ -0.73
UFD1-204ENST00000447868 PRO2289Q9P1D8 64 aa10.5□□□□□ -0.73
UFD1-204ENST00000447868 COA5Q86WW8 74 aa10.41□□□□□ -0.74
UFD1-204ENST00000447868 CYSTM1Q9H1C7 97 aa10.36□□□□□ -0.75
UFD1-204ENST00000447868 H7BZZ5 65 aa10.32□□□□□ -0.76
UFD1-204ENST00000447868 ANAPC13Q9BS18 74 aa10.27□□□□□ -0.77
UFD1-204ENST00000447868 KRTAP5-9P26371 169 aa10.25□□□□□ -0.77
UFD1-204ENST00000447868 MUC12Q9UKN1 5478 aa10.23□□□□□ -0.77
UFD1-204ENST00000447868 KRTAP13-4Q3LI77 160 aa10.22□□□□□ -0.77
UFD1-204ENST00000447868 KMT2DO14686 5537 aa10.2□□□□□ -0.78
UFD1-204ENST00000447868 NEBP20929 6669 aa10.18□□□□□ -0.78
UFD1-204ENST00000447868 KRTAP12-2P59991 146 aa10.16□□□□□ -0.78
UFD1-204ENST00000447868 SEC61GP60059 68 aa10.16□□□□□ -0.78
UFD1-204ENST00000447868 SERP1Q9Y6X1 66 aa10.14□□□□□ -0.79
UFD1-204ENST00000447868 CCDC179H3BU77 68 aa10.07□□□□□ -0.8
UFD1-204ENST00000447868 KRTAP8-1Q8IUC2 63 aa10.07□□□□□ -0.8
UFD1-204ENST00000447868 SPRR2FQ96RM1 72 aa10.05□□□□□ -0.8
UFD1-204ENST00000447868 KRTAP10-7P60409 375 aaPredicted RBP10.04□□□□□ -0.8
UFD1-204ENST00000447868 KRTAP4-8A0A0G2JLE6 195 aa10□□□□□ -0.81
UFD1-204ENST00000447868 KRTAP4-8Q9BYQ9 185 aa10□□□□□ -0.81
UFD1-204ENST00000447868 A0A0D9SG42 100 aa9.97□□□□□ -0.81
UFD1-204ENST00000447868 SPATA8Q6RVD6 105 aa9.97□□□□□ -0.81
UFD1-204ENST00000447868 A0A1B0GU33 70 aa9.96□□□□□ -0.82
UFD1-204ENST00000447868 CAMK2N1Q7Z7J9 78 aa9.96□□□□□ -0.82
UFD1-204ENST00000447868 MDN1Q9NU22 5596 aa9.95□□□□□ -0.82
UFD1-204ENST00000447868 KRTAP10-12P60413 245 aa9.95□□□□□ -0.82
UFD1-204ENST00000447868 A0A1B0GU69 56 aa9.88□□□□□ -0.83
UFD1-204ENST00000447868 SPRR2EP22531 72 aa9.86□□□□□ -0.83
UFD1-204ENST00000447868 SPRR2BP35325 72 aa9.86□□□□□ -0.83
UFD1-204ENST00000447868 SPRR2AP35326 72 aa9.86□□□□□ -0.83
UFD1-204ENST00000447868 ATP5EP56381 51 aaPredicted RBP9.84□□□□□ -0.83
UFD1-204ENST00000447868 KRTAP20-1Q3LI63 56 aa9.82□□□□□ -0.84
UFD1-204ENST00000447868 SPINT4Q6UDR6 99 aa9.8□□□□□ -0.84
UFD1-204ENST00000447868 LCE1AQ5T7P2 110 aa9.73□□□□□ -0.85
UFD1-204ENST00000447868 KRTAP12-1P59990 96 aa9.72□□□□□ -0.85
UFD1-204ENST00000447868 SMIM26A0A096LP01 95 aa9.68□□□□□ -0.86
UFD1-204ENST00000447868 TMEM258P61165 79 aa9.66□□□□□ -0.86
UFD1-204ENST00000447868 A8MU10 97 aa9.64□□□□□ -0.87
UFD1-204ENST00000447868 PRR15LQ9BU68 103 aa9.63□□□□□ -0.87
UFD1-204ENST00000447868 KRTAP2-3P0C7H8 128 aa9.6□□□□□ -0.87
UFD1-204ENST00000447868 KRTAP2-4Q9BYR9 128 aa9.6□□□□□ -0.87
UFD1-204ENST00000447868 LINC01558Q9Y6Z2 57 aa9.57□□□□□ -0.88
UFD1-204ENST00000447868 SPRR2DP22532 72 aa9.53□□□□□ -0.88
UFD1-204ENST00000447868 KRTAP19-7Q3SYF9 63 aa9.37□□□□□ -0.91
UFD1-204ENST00000447868 UQCR11O14957 56 aa9.3□□□□□ -0.92
UFD1-204ENST00000447868 KRTAP2-2Q9BYT5 123 aa9.3□□□□□ -0.92
UFD1-204ENST00000447868 KRTAP2-1Q9BYU5 128 aa9.3□□□□□ -0.92
UFD1-204ENST00000447868 MT1EP04732 61 aa9.29□□□□□ -0.92
UFD1-204ENST00000447868 C10orf95Q9H7T3 257 aa9.29□□□□□ -0.92
UFD1-204ENST00000447868 LCE3BQ5TA77 95 aa9.24□□□□□ -0.93
UFD1-204ENST00000447868 KRTAP19-5Q3LI72 72 aa9.22□□□□□ -0.93
UFD1-204ENST00000447868 TNP1P09430 55 aa9.21□□□□□ -0.94
UFD1-204ENST00000447868 KRTAP19-3Q7Z4W3 81 aa9.16□□□□□ -0.94
UFD1-204ENST00000447868 LCE5AQ5TCM9 118 aa9.15□□□□□ -0.94
UFD1-204ENST00000447868 MIR22HGQ0VDD5 57 aa9.13□□□□□ -0.95
UFD1-204ENST00000447868 LCE3AQ5TA76 89 aa9.11□□□□□ -0.95
UFD1-204ENST00000447868 V9GYY9 64 aa9.1□□□□□ -0.95
UFD1-204ENST00000447868 PSPHP1O15172 72 aa9.09□□□□□ -0.95
UFD1-204ENST00000447868 Q1T7F1 81 aa9.05□□□□□ -0.96
UFD1-204ENST00000447868 MT1GP13640 62 aa8.96□□□□□ -0.98
UFD1-204ENST00000447868 K7ERS5 55 aa8.91□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 100.1 ms