RNA–Protein interactions for RNA: ENST00000447609.5

LMO3-209, Transcript of LIM domain only 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMO3, Length 3,365 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3-209ENST00000447609 EPPK1P58107 5090 aaKnown RBP3.06□□□□□ -1.92
LMO3-209ENST00000447609 VPS13DQ5THJ4 4388 aa3.05□□□□□ -1.92
LMO3-209ENST00000447609 SRRM2Q9UQ35 2752 aaKnown RBP3.05□□□□□ -1.92
LMO3-209ENST00000447609 SPINT4Q6UDR6 99 aa3.04□□□□□ -1.92
LMO3-209ENST00000447609 DNAH10Q8IVF4 4471 aa3.04□□□□□ -1.92
LMO3-209ENST00000447609 KMT2AQ03164 3969 aa3.04□□□□□ -1.92
LMO3-209ENST00000447609 H0YAA0 97 aa3.04□□□□□ -1.92
LMO3-209ENST00000447609 KRTAP4-11Q9BYQ6 195 aa3.04□□□□□ -1.92
LMO3-209ENST00000447609 KRTAP23-1A1A580 65 aa3.04□□□□□ -1.92
LMO3-209ENST00000447609 C9orf92A6NGG3 77 aa3.04□□□□□ -1.92
LMO3-209ENST00000447609 KRTAP16-1A8MUX0 517 aa3.04□□□□□ -1.92
LMO3-209ENST00000447609 KRTAP4-5Q9BYR2 181 aa3.04□□□□□ -1.92
LMO3-209ENST00000447609 DNAH17Q9UFH2 4485 aa3.03□□□□□ -1.92
LMO3-209ENST00000447609 FAT2Q9NYQ8 4349 aa3.02□□□□□ -1.93
LMO3-209ENST00000447609 KRTAP9-7A8MTY7 169 aa3.02□□□□□ -1.93
LMO3-209ENST00000447609 KRTAP13-2Q52LG2 175 aa3.02□□□□□ -1.93
LMO3-209ENST00000447609 LCE5AQ5TCM9 118 aa3.01□□□□□ -1.93
LMO3-209ENST00000447609 KRTAP1-4P0C5Y4 121 aa3.01□□□□□ -1.93
LMO3-209ENST00000447609 PKD1P98161 4303 aa3.01□□□□□ -1.93
LMO3-209ENST00000447609 KRTAP9-3Q9BYQ3 159 aa3□□□□□ -1.93
LMO3-209ENST00000447609 COX6B2Q6YFQ2 88 aa2.99□□□□□ -1.93
LMO3-209ENST00000447609 DNAH2Q9P225 4427 aa2.99□□□□□ -1.93
LMO3-209ENST00000447609 RPL37P61927 97 aaKnown RBP2.98□□□□□ -1.93
LMO3-209ENST00000447609 LCE4AQ5TA78 99 aa2.98□□□□□ -1.93
LMO3-209ENST00000447609 HERC2O95714 4834 aa2.98□□□□□ -1.93
LMO3-209ENST00000447609 KRTAP10-8P60410 259 aa2.97□□□□□ -1.93
LMO3-209ENST00000447609 KRTAP17-1Q9BYP8 105 aa2.97□□□□□ -1.93
LMO3-209ENST00000447609 CRIPTQ9P021 101 aa2.97□□□□□ -1.93
LMO3-209ENST00000447609 RPS29P62273 56 aaKnown RBP2.96□□□□□ -1.94
LMO3-209ENST00000447609 DYNC1H1Q14204 4646 aaKnown RBP2.96□□□□□ -1.94
LMO3-209ENST00000447609 P0C880 135 aa2.95□□□□□ -1.94
LMO3-209ENST00000447609 PKHD1P08F94 4074 aa2.95□□□□□ -1.94
LMO3-209ENST00000447609 KRTAP10-4P60372 401 aaPredicted RBP2.95□□□□□ -1.94
LMO3-209ENST00000447609 SEC61BP60468 96 aaKnown RBP2.95□□□□□ -1.94
LMO3-209ENST00000447609 C20orf166-AS1Q96NR2 134 aa2.95□□□□□ -1.94
LMO3-209ENST00000447609 DNAH11Q96DT5 4516 aa2.94□□□□□ -1.94
LMO3-209ENST00000447609 KIAA1109Q2LD37 5005 aa2.92□□□□□ -1.94
LMO3-209ENST00000447609 NDUFAF8A1L188 74 aa2.92□□□□□ -1.94
LMO3-209ENST00000447609 MT1HL1P0DM35 61 aa2.92□□□□□ -1.94
LMO3-209ENST00000447609 VPS13BQ7Z7G8 4022 aa2.91□□□□□ -1.94
LMO3-209ENST00000447609 PCLOQ9Y6V0 5065 aa2.89□□□□□ -1.95
LMO3-209ENST00000447609 HSPG2P98160 4391 aa2.89□□□□□ -1.95
LMO3-209ENST00000447609 DNAH5Q8TE73 4624 aa2.89□□□□□ -1.95
LMO3-209ENST00000447609 KRTAP15-1Q3LI76 137 aa2.87□□□□□ -1.95
LMO3-209ENST00000447609 RYR1P21817 5038 aa2.87□□□□□ -1.95
LMO3-209ENST00000447609 PKHD1L1Q86WI1 4243 aa2.87□□□□□ -1.95
LMO3-209ENST00000447609 APOBP04114 4563 aaKnown RBP2.87□□□□□ -1.95
LMO3-209ENST00000447609 A0A0D9SG42 100 aa2.86□□□□□ -1.95
LMO3-209ENST00000447609 TPRXLQ17RH7 258 aa2.86□□□□□ -1.95
LMO3-209ENST00000447609 A0A0A0MQY5 61 aa2.86□□□□□ -1.95
LMO3-209ENST00000447609 M0R2T5 61 aa2.86□□□□□ -1.95
LMO3-209ENST00000447609 KRTAP3-1Q9BYR8 98 aa2.85□□□□□ -1.95
LMO3-209ENST00000447609 LRP1BQ9NZR2 4599 aa2.85□□□□□ -1.95
LMO3-209ENST00000447609 ABCA13Q86UQ4 5058 aa2.84□□□□□ -1.95
LMO3-209ENST00000447609 DNAH8Q96JB1 4490 aa2.84□□□□□ -1.95
LMO3-209ENST00000447609 S4R3F8 94 aa2.83□□□□□ -1.96
LMO3-209ENST00000447609 LUZP6Q538Z0 58 aa2.83□□□□□ -1.96
LMO3-209ENST00000447609 FAT1Q14517 4588 aa2.82□□□□□ -1.96
LMO3-209ENST00000447609 C10orf95Q9H7T3 257 aa2.8□□□□□ -1.96
LMO3-209ENST00000447609 KRTAP10-6P60371 365 aaPredicted RBP2.79□□□□□ -1.96
LMO3-209ENST00000447609 M0QZ58 72 aa2.78□□□□□ -1.96
LMO3-209ENST00000447609 KRTAP13-4Q3LI77 160 aa2.75□□□□□ -1.97
LMO3-209ENST00000447609 FAT3Q8TDW7 4589 aa2.75□□□□□ -1.97
LMO3-209ENST00000447609 KRTAP12-1P59990 96 aa2.73□□□□□ -1.97
LMO3-209ENST00000447609 KRTAP12-2P59991 146 aa2.73□□□□□ -1.97
LMO3-209ENST00000447609 PLAC4Q8WY50 150 aa2.72□□□□□ -1.97
LMO3-209ENST00000447609 MYCBP2O75592 4640 aa2.72□□□□□ -1.97
LMO3-209ENST00000447609 KRTAP5-3Q6L8H2 238 aa2.7□□□□□ -1.98
LMO3-209ENST00000447609 PP632Q6XCG6 107 aa2.7□□□□□ -1.98
LMO3-209ENST00000447609 KRTAP9-8Q9BYQ0 159 aa2.7□□□□□ -1.98
LMO3-209ENST00000447609 HERC1Q15751 4861 aa2.69□□□□□ -1.98
LMO3-209ENST00000447609 LRP1Q07954 4544 aaKnown RBP2.68□□□□□ -1.98
LMO3-209ENST00000447609 TNXBP22105 4242 aa2.68□□□□□ -1.98
LMO3-209ENST00000447609 R4GN34 69 aa2.64□□□□□ -1.99
LMO3-209ENST00000447609 HMCN2Q8NDA2 5059 aa2.63□□□□□ -1.99
LMO3-209ENST00000447609 CAMK2N1Q7Z7J9 78 aa2.63□□□□□ -1.99
LMO3-209ENST00000447609 KRTAP4-1Q9BYQ7 146 aa2.58□□□□□ -2
LMO3-209ENST00000447609 KRTAP10-10P60014 251 aa2.58□□□□□ -2
LMO3-209ENST00000447609 LRP2P98164 4655 aa2.54□□□□□ -2
LMO3-209ENST00000447609 UBR4Q5T4S7 5183 aa2.51□□□□□ -2.01
LMO3-209ENST00000447609 TNP1P09430 55 aa2.5□□□□□ -2.01
LMO3-209ENST00000447609 PRO2289Q9P1D8 64 aa2.49□□□□□ -2.01
LMO3-209ENST00000447609 HMCN1Q96RW7 5635 aa2.49□□□□□ -2.01
LMO3-209ENST00000447609 MUC17Q685J3 4493 aa2.49□□□□□ -2.01
LMO3-209ENST00000447609 MT1HP80294 61 aa2.49□□□□□ -2.01
LMO3-209ENST00000447609 INE1O15225 51 aa2.47□□□□□ -2.01
LMO3-209ENST00000447609 LPAP08519 4548 aa2.46□□□□□ -2.02
LMO3-209ENST00000447609 RNF213Q63HN8 5207 aa2.45□□□□□ -2.02
LMO3-209ENST00000447609 SPRR5A0A1B0GTR4 108 aa2.44□□□□□ -2.02
LMO3-209ENST00000447609 MT2AP02795 61 aa2.38□□□□□ -2.03
LMO3-209ENST00000447609 KRTAP19-2Q3LHN2 52 aa2.37□□□□□ -2.03
LMO3-209ENST00000447609 FAT4Q6V0I7 4981 aa2.35□□□□□ -2.03
LMO3-209ENST00000447609 MT1FP04733 61 aa2.35□□□□□ -2.03
LMO3-209ENST00000447609 LCE1AQ5T7P2 110 aa2.34□□□□□ -2.04
LMO3-209ENST00000447609 MUC2Q02817 5179 aa2.32□□□□□ -2.04
LMO3-209ENST00000447609 MT3P25713 68 aa2.27□□□□□ -2.05
LMO3-209ENST00000447609 FLGP20930 4061 aaPredicted RBP2.27□□□□□ -2.05
LMO3-209ENST00000447609 CRCT1Q9UGL9 99 aa2.26□□□□□ -2.05
LMO3-209ENST00000447609 SPRR2GQ9BYE4 73 aa2.23□□□□□ -2.05
LMO3-209ENST00000447609 FSIP2Q5CZC0 6907 aa2.21□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms