RNA–Protein interactions for RNA: ENST00000445721.5

NUP50-211, Transcript of nucleoporin 50, humanhuman

TSL 5

Gene NUP50, Length 443 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-211ENST00000445721 LCE3BQ5TA77 95 aa9.81□□□□□ -0.84
NUP50-211ENST00000445721 KRTAP4-8A0A0G2JLE6 195 aa9.78□□□□□ -0.84
NUP50-211ENST00000445721 A8MUN3 132 aa9.78□□□□□ -0.84
NUP50-211ENST00000445721 TSTD3H0UI37 97 aa9.78□□□□□ -0.84
NUP50-211ENST00000445721 KRTAP4-8Q9BYQ9 185 aa9.78□□□□□ -0.84
NUP50-211ENST00000445721 H3BT86 120 aa9.77□□□□□ -0.85
NUP50-211ENST00000445721 PLAC4Q8WY50 150 aa9.77□□□□□ -0.85
NUP50-211ENST00000445721 GPR98Q8WXG9 6306 aa9.74□□□□□ -0.85
NUP50-211ENST00000445721 H0YAA0 97 aa9.73□□□□□ -0.85
NUP50-211ENST00000445721 TP53AIP1Q9HCN2 124 aa9.72□□□□□ -0.85
NUP50-211ENST00000445721 CYP4F30PQ9H0H9 118 aa9.7□□□□□ -0.86
NUP50-211ENST00000445721 ADM2Q7Z4H4 148 aa9.68□□□□□ -0.86
NUP50-211ENST00000445721 NDUFC1O43677 76 aa9.67□□□□□ -0.86
NUP50-211ENST00000445721 UBL5Q9BZL1 73 aa9.62□□□□□ -0.87
NUP50-211ENST00000445721 K7EP34 96 aa9.57□□□□□ -0.88
NUP50-211ENST00000445721 BATFQ16520 125 aa9.54□□□□□ -0.88
NUP50-211ENST00000445721 LOC105371267A0A1B0GV96 52 aa9.52□□□□□ -0.89
NUP50-211ENST00000445721 C9orf118A6NHY6 69 aa9.5□□□□□ -0.89
NUP50-211ENST00000445721 SMIM6P0DI80 62 aa9.5□□□□□ -0.89
NUP50-211ENST00000445721 A0A1W2PPM0 123 aa9.49□□□□□ -0.89
NUP50-211ENST00000445721 LOC101927531A0A1B0GV80 90 aa9.48□□□□□ -0.89
NUP50-211ENST00000445721 KRTAP10-7P60409 375 aaPredicted RBP9.48□□□□□ -0.89
NUP50-211ENST00000445721 R4GN34 69 aa9.48□□□□□ -0.89
NUP50-211ENST00000445721 TRAV22A0A0B4J277 110 aa9.43□□□□□ -0.9
NUP50-211ENST00000445721 KRTAP10-12P60413 245 aa9.41□□□□□ -0.9
NUP50-211ENST00000445721 TAX1BP3O14907 124 aa9.39□□□□□ -0.91
NUP50-211ENST00000445721 ACYP1P07311 99 aa9.39□□□□□ -0.91
NUP50-211ENST00000445721 M0QZ58 72 aa9.38□□□□□ -0.91
NUP50-211ENST00000445721 P0C880 135 aa9.35□□□□□ -0.91
NUP50-211ENST00000445721 DSTQ03001 7570 aaKnown RBP9.35□□□□□ -0.91
NUP50-211ENST00000445721 KRTAP4-9Q9BYQ8 210 aa9.35□□□□□ -0.91
NUP50-211ENST00000445721 SPCS1Q9Y6A9 102 aa9.35□□□□□ -0.91
NUP50-211ENST00000445721 LINC01554Q52M75 96 aa9.32□□□□□ -0.92
NUP50-211ENST00000445721 C20orf197Q8N268 126 aa9.29□□□□□ -0.92
NUP50-211ENST00000445721 H0Y9P7 68 aa9.21□□□□□ -0.94
NUP50-211ENST00000445721 PRO0461Q9UI25 63 aa9.19□□□□□ -0.94
NUP50-211ENST00000445721 ATOX1O00244 68 aa9.18□□□□□ -0.94
NUP50-211ENST00000445721 UQCRQO14949 82 aa9.16□□□□□ -0.94
NUP50-211ENST00000445721 KRTAP3-2Q9BYR7 98 aa9.12□□□□□ -0.95
NUP50-211ENST00000445721 LCE5AQ5TCM9 118 aa9.04□□□□□ -0.96
NUP50-211ENST00000445721 LCE1DQ5T752 114 aa9.02□□□□□ -0.97
NUP50-211ENST00000445721 LINC00208Q96KT6 92 aa9.01□□□□□ -0.97
NUP50-211ENST00000445721 MT-ATP8P03928 68 aa8.96□□□□□ -0.98
NUP50-211ENST00000445721 PCP4L1A6NKN8 68 aa8.95□□□□□ -0.98
NUP50-211ENST00000445721 HIST1H4AP62805 103 aaKnown RBP8.94□□□□□ -0.98
NUP50-211ENST00000445721 COL5A1-AS1Q5SY13 56 aa8.94□□□□□ -0.98
NUP50-211ENST00000445721 HMCN1Q96RW7 5635 aa8.93□□□□□ -0.98
NUP50-211ENST00000445721 KRTAP19-3Q7Z4W3 81 aa8.92□□□□□ -0.98
NUP50-211ENST00000445721 ETDBQ3ZM63 59 aa8.89□□□□□ -0.99
NUP50-211ENST00000445721 KRTAP19-7Q3SYF9 63 aa8.88□□□□□ -0.99
NUP50-211ENST00000445721 AHNAK2Q8IVF2 5795 aa8.85□□□□□ -0.99
NUP50-211ENST00000445721 MT1EP04732 61 aa8.85□□□□□ -0.99
NUP50-211ENST00000445721 MT4P47944 62 aa8.85□□□□□ -0.99
NUP50-211ENST00000445721 MP68P56378 58 aa8.82□□□□□ -1
NUP50-211ENST00000445721 ATP5EP2Q5VTU8 51 aa8.81□□□□□ -1
NUP50-211ENST00000445721 DMAC1Q96GE9 116 aa8.8□□□□□ -1
NUP50-211ENST00000445721 F8W1H4 67 aa8.79□□□□□ -1
NUP50-211ENST00000445721 CYSTM1Q9H1C7 97 aa8.79□□□□□ -1
NUP50-211ENST00000445721 LCE4AQ5TA78 99 aa8.78□□□□□ -1
NUP50-211ENST00000445721 GTF2H5Q6ZYL4 71 aa8.74□□□□□ -1.01
NUP50-211ENST00000445721 KRTAP5-10Q6L8G5 202 aa8.72□□□□□ -1.01
NUP50-211ENST00000445721 OCR1Q9BZK8 76 aa8.69□□□□□ -1.02
NUP50-211ENST00000445721 MT1GP13640 62 aa8.63□□□□□ -1.03
NUP50-211ENST00000445721 CAMK2N1Q7Z7J9 78 aa8.62□□□□□ -1.03
NUP50-211ENST00000445721 FAM240AA0A1B0GVK7 77 aa8.6□□□□□ -1.03
NUP50-211ENST00000445721 TRAV7A0A075B6U4 112 aa8.58□□□□□ -1.04
NUP50-211ENST00000445721 H3BPC8 53 aa8.56□□□□□ -1.04
NUP50-211ENST00000445721 PP632Q6XCG6 107 aa8.56□□□□□ -1.04
NUP50-211ENST00000445721 KRTAP4-6Q9BYQ5 205 aa8.51□□□□□ -1.05
NUP50-211ENST00000445721 A0A1B0GV90 55 aa8.5□□□□□ -1.05
NUP50-211ENST00000445721 KRTAP19-5Q3LI72 72 aa8.5□□□□□ -1.05
NUP50-211ENST00000445721 SPTSSBQ8NFR3 76 aa8.5□□□□□ -1.05
NUP50-211ENST00000445721 KRTAP5-7Q6L8G8 165 aa8.48□□□□□ -1.05
NUP50-211ENST00000445721 KRTAP5-4Q6L8H1 288 aa8.48□□□□□ -1.05
NUP50-211ENST00000445721 LINC00643Q86TS7 51 aa8.48□□□□□ -1.05
NUP50-211ENST00000445721 MT1MQ8N339 61 aa8.48□□□□□ -1.05
NUP50-211ENST00000445721 ACYP2P14621 99 aa8.46□□□□□ -1.06
NUP50-211ENST00000445721 KRTAP13-4Q3LI77 160 aa8.43□□□□□ -1.06
NUP50-211ENST00000445721 A0A0D9SG42 100 aa8.42□□□□□ -1.06
NUP50-211ENST00000445721 KRTAP5-3Q6L8H2 238 aa8.36□□□□□ -1.07
NUP50-211ENST00000445721 KRTAP4-3Q9BYR4 195 aa8.35□□□□□ -1.07
NUP50-211ENST00000445721 MT1LQ93083 61 aa8.34□□□□□ -1.07
NUP50-211ENST00000445721 CHKB-CPT1BH3BT56 60 aa8.32□□□□□ -1.08
NUP50-211ENST00000445721 SCGB1A1P11684 91 aa8.25□□□□□ -1.09
NUP50-211ENST00000445721 SPRR5A0A1B0GTR4 108 aa8.2□□□□□ -1.1
NUP50-211ENST00000445721 J3QR89 54 aa8.11□□□□□ -1.11
NUP50-211ENST00000445721 KRTAP20-2Q3LI61 65 aa8.08□□□□□ -1.12
NUP50-211ENST00000445721 SPINT4Q6UDR6 99 aa8.05□□□□□ -1.12
NUP50-211ENST00000445721 C10orf95Q9H7T3 257 aa8.02□□□□□ -1.13
NUP50-211ENST00000445721 K7ERU9 68 aa7.97□□□□□ -1.13
NUP50-211ENST00000445721 LCE3AQ5TA76 89 aa7.94□□□□□ -1.14
NUP50-211ENST00000445721 SPATA8Q6RVD6 105 aa7.94□□□□□ -1.14
NUP50-211ENST00000445721 KRTAP4-7Q9BYR0 210 aa7.94□□□□□ -1.14
NUP50-211ENST00000445721 KRTAP12-1P59990 96 aa7.9□□□□□ -1.14
NUP50-211ENST00000445721 KRTAP12-4P60329 112 aa7.84□□□□□ -1.15
NUP50-211ENST00000445721 KRTAP5-5Q701N2 237 aaPredicted RBP7.82□□□□□ -1.16
NUP50-211ENST00000445721 SNURFQ9Y675 71 aa7.81□□□□□ -1.16
NUP50-211ENST00000445721 SERP1Q9Y6X1 66 aa7.81□□□□□ -1.16
NUP50-211ENST00000445721 SEC61GP60059 68 aa7.8□□□□□ -1.16
NUP50-211ENST00000445721 SMIM20Q8N5G0 67 aa7.78□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms