RNA–Protein interactions for RNA: ENST00000444440.1

SF3A1-203, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 5

Gene SF3A1, Length 777 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-203ENST00000444440 LCA10Q71F78 164 aa4.97□□□□□ -1.61
SF3A1-203ENST00000444440 LINC00208Q96KT6 92 aa4.97□□□□□ -1.61
SF3A1-203ENST00000444440 SCGB1A1P11684 91 aa4.96□□□□□ -1.62
SF3A1-203ENST00000444440 OCR1Q9BZK8 76 aa4.96□□□□□ -1.62
SF3A1-203ENST00000444440 FAM236AA0A1B0GUQ0 79 aa4.95□□□□□ -1.62
SF3A1-203ENST00000444440 FAM236BA0A1B0GV22 79 aa4.95□□□□□ -1.62
SF3A1-203ENST00000444440 K7ERU9 68 aa4.93□□□□□ -1.62
SF3A1-203ENST00000444440 MT1BP07438 61 aa4.93□□□□□ -1.62
SF3A1-203ENST00000444440 KRTAP3-3Q9BYR6 98 aa4.93□□□□□ -1.62
SF3A1-203ENST00000444440 A8MUN3 132 aa4.92□□□□□ -1.62
SF3A1-203ENST00000444440 H3BPC8 53 aa4.92□□□□□ -1.62
SF3A1-203ENST00000444440 IMUPQ9GZP8 106 aa4.92□□□□□ -1.62
SF3A1-203ENST00000444440 NDUFC1O43677 76 aa4.9□□□□□ -1.63
SF3A1-203ENST00000444440 KLKP1Q107X0 134 aa4.89□□□□□ -1.63
SF3A1-203ENST00000444440 SPRR2GQ9BYE4 73 aa4.88□□□□□ -1.63
SF3A1-203ENST00000444440 KRTAP19-8Q3LI54 63 aa4.87□□□□□ -1.63
SF3A1-203ENST00000444440 SMIM20Q8N5G0 67 aa4.86□□□□□ -1.63
SF3A1-203ENST00000444440 MT-ATP8P03928 68 aa4.84□□□□□ -1.63
SF3A1-203ENST00000444440 KRTAP6-3Q3LI67 103 aa4.84□□□□□ -1.63
SF3A1-203ENST00000444440 Q5VV11 94 aa4.83□□□□□ -1.64
SF3A1-203ENST00000444440 CRIPTQ9P021 101 aa4.82□□□□□ -1.64
SF3A1-203ENST00000444440 MUC12Q9UKN1 5478 aa4.82□□□□□ -1.64
SF3A1-203ENST00000444440 TRAV7A0A075B6U4 112 aa4.81□□□□□ -1.64
SF3A1-203ENST00000444440 A6NN06 94 aa4.8□□□□□ -1.64
SF3A1-203ENST00000444440 H0YAA0 97 aa4.79□□□□□ -1.64
SF3A1-203ENST00000444440 KRTAP10-5P60370 271 aa4.78□□□□□ -1.64
SF3A1-203ENST00000444440 DMAC1Q96GE9 116 aa4.77□□□□□ -1.65
SF3A1-203ENST00000444440 ACYP2P14621 99 aa4.74□□□□□ -1.65
SF3A1-203ENST00000444440 ADM2Q7Z4H4 148 aa4.74□□□□□ -1.65
SF3A1-203ENST00000444440 NEBP20929 6669 aa4.72□□□□□ -1.65
SF3A1-203ENST00000444440 KMT2DO14686 5537 aa4.71□□□□□ -1.66
SF3A1-203ENST00000444440 C20orf197Q8N268 126 aa4.7□□□□□ -1.66
SF3A1-203ENST00000444440 SPTSSBQ8NFR3 76 aa4.69□□□□□ -1.66
SF3A1-203ENST00000444440 SERP2Q8N6R1 65 aa4.67□□□□□ -1.66
SF3A1-203ENST00000444440 SNURFQ9Y675 71 aa4.67□□□□□ -1.66
SF3A1-203ENST00000444440 CHKB-CPT1BH3BT56 60 aa4.64□□□□□ -1.67
SF3A1-203ENST00000444440 R4GN34 69 aa4.64□□□□□ -1.67
SF3A1-203ENST00000444440 KRTAP5-9P26371 169 aa4.63□□□□□ -1.67
SF3A1-203ENST00000444440 SPANXA2-OT1Q8N9U9 137 aa4.63□□□□□ -1.67
SF3A1-203ENST00000444440 MDN1Q9NU22 5596 aa4.62□□□□□ -1.67
SF3A1-203ENST00000444440 P0C880 135 aa4.61□□□□□ -1.67
SF3A1-203ENST00000444440 MT1XP80297 61 aa4.6□□□□□ -1.67
SF3A1-203ENST00000444440 PLAC4Q8WY50 150 aa4.6□□□□□ -1.67
SF3A1-203ENST00000444440 M0QZ58 72 aa4.59□□□□□ -1.67
SF3A1-203ENST00000444440 KRTAP3-2Q9BYR7 98 aa4.58□□□□□ -1.68
SF3A1-203ENST00000444440 COX7CP15954 63 aa4.55□□□□□ -1.68
SF3A1-203ENST00000444440 PRO2289Q9P1D8 64 aa4.54□□□□□ -1.68
SF3A1-203ENST00000444440 LINC01554Q52M75 96 aa4.52□□□□□ -1.69
SF3A1-203ENST00000444440 KRTAP20-1Q3LI63 56 aa4.5□□□□□ -1.69
SF3A1-203ENST00000444440 COA5Q86WW8 74 aa4.47□□□□□ -1.69
SF3A1-203ENST00000444440 SPRR2FQ96RM1 72 aa4.47□□□□□ -1.69
SF3A1-203ENST00000444440 ANAPC13Q9BS18 74 aa4.45□□□□□ -1.7
SF3A1-203ENST00000444440 KRTAP4-8A0A0G2JLE6 195 aa4.44□□□□□ -1.7
SF3A1-203ENST00000444440 KRTAP12-2P59991 146 aa4.44□□□□□ -1.7
SF3A1-203ENST00000444440 SEC61GP60059 68 aa4.44□□□□□ -1.7
SF3A1-203ENST00000444440 KRTAP4-8Q9BYQ9 185 aa4.44□□□□□ -1.7
SF3A1-203ENST00000444440 H7BZZ5 65 aa4.43□□□□□ -1.7
SF3A1-203ENST00000444440 KRTAP8-1Q8IUC2 63 aa4.42□□□□□ -1.7
SF3A1-203ENST00000444440 SERP1Q9Y6X1 66 aa4.42□□□□□ -1.7
SF3A1-203ENST00000444440 SPRR2EP22531 72 aa4.41□□□□□ -1.7
SF3A1-203ENST00000444440 SPRR2BP35325 72 aa4.41□□□□□ -1.7
SF3A1-203ENST00000444440 SPRR2AP35326 72 aa4.41□□□□□ -1.7
SF3A1-203ENST00000444440 KRTAP10-7P60409 375 aaPredicted RBP4.4□□□□□ -1.71
SF3A1-203ENST00000444440 LCE1AQ5T7P2 110 aa4.38□□□□□ -1.71
SF3A1-203ENST00000444440 CYSTM1Q9H1C7 97 aa4.38□□□□□ -1.71
SF3A1-203ENST00000444440 KRTAP2-3P0C7H8 128 aa4.36□□□□□ -1.71
SF3A1-203ENST00000444440 KRTAP2-4Q9BYR9 128 aa4.36□□□□□ -1.71
SF3A1-203ENST00000444440 KRTAP10-12P60413 245 aa4.35□□□□□ -1.71
SF3A1-203ENST00000444440 KRTAP13-4Q3LI77 160 aa4.32□□□□□ -1.72
SF3A1-203ENST00000444440 A0A1B0GU33 70 aa4.31□□□□□ -1.72
SF3A1-203ENST00000444440 CCDC179H3BU77 68 aa4.31□□□□□ -1.72
SF3A1-203ENST00000444440 ATP5EP56381 51 aaPredicted RBP4.29□□□□□ -1.72
SF3A1-203ENST00000444440 CAMK2N1Q7Z7J9 78 aa4.29□□□□□ -1.72
SF3A1-203ENST00000444440 A0A1B0GU69 56 aa4.28□□□□□ -1.72
SF3A1-203ENST00000444440 SPRR2DP22532 72 aa4.26□□□□□ -1.73
SF3A1-203ENST00000444440 A0A0D9SG42 100 aa4.25□□□□□ -1.73
SF3A1-203ENST00000444440 SPATA8Q6RVD6 105 aa4.25□□□□□ -1.73
SF3A1-203ENST00000444440 RPS28P62857 69 aaKnown RBP4.22□□□□□ -1.73
SF3A1-203ENST00000444440 PRR15LQ9BU68 103 aa4.22□□□□□ -1.73
SF3A1-203ENST00000444440 KRTAP2-2Q9BYT5 123 aa4.22□□□□□ -1.73
SF3A1-203ENST00000444440 KRTAP2-1Q9BYU5 128 aa4.22□□□□□ -1.73
SF3A1-203ENST00000444440 SMIM26A0A096LP01 95 aa4.21□□□□□ -1.74
SF3A1-203ENST00000444440 SPINT4Q6UDR6 99 aa4.21□□□□□ -1.74
SF3A1-203ENST00000444440 TMEM258P61165 79 aa4.19□□□□□ -1.74
SF3A1-203ENST00000444440 KRTAP12-1P59990 96 aa4.15□□□□□ -1.75
SF3A1-203ENST00000444440 LCE3BQ5TA77 95 aa4.15□□□□□ -1.75
SF3A1-203ENST00000444440 LINC01558Q9Y6Z2 57 aa4.14□□□□□ -1.75
SF3A1-203ENST00000444440 KRTAP19-7Q3SYF9 63 aa4.12□□□□□ -1.75
SF3A1-203ENST00000444440 PRO0628Q9UI54 55 aa4.12□□□□□ -1.75
SF3A1-203ENST00000444440 V9GYY9 64 aa4.11□□□□□ -1.75
SF3A1-203ENST00000444440 A8MU10 97 aa4.1□□□□□ -1.75
SF3A1-203ENST00000444440 MT1EP04732 61 aa4.07□□□□□ -1.76
SF3A1-203ENST00000444440 UQCR11O14957 56 aa4.05□□□□□ -1.76
SF3A1-203ENST00000444440 LCE5AQ5TCM9 118 aa4.05□□□□□ -1.76
SF3A1-203ENST00000444440 DSTQ03001 7570 aaKnown RBP4.03□□□□□ -1.76
SF3A1-203ENST00000444440 KRTAP19-3Q7Z4W3 81 aa4.02□□□□□ -1.77
SF3A1-203ENST00000444440 TNP1P09430 55 aa3.99□□□□□ -1.77
SF3A1-203ENST00000444440 KRTAP19-5Q3LI72 72 aa3.98□□□□□ -1.77
SF3A1-203ENST00000444440 C10orf95Q9H7T3 257 aa3.96□□□□□ -1.78
SF3A1-203ENST00000444440 MIR22HGQ0VDD5 57 aa3.95□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 289.7 ms