RNA–Protein interactions for RNA: ENST00000443878.1

RAB5A-204, Transcript of RAB5A, member RAS oncogene family, humanhuman

TSL 3

Gene RAB5A, Length 753 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5A-204ENST00000443878 A8MUN3 132 aa9.51□□□□□ -0.89
RAB5A-204ENST00000443878 SPRR2GQ9BYE4 73 aa9.51□□□□□ -0.89
RAB5A-204ENST00000443878 MP68P56378 58 aa9.5□□□□□ -0.89
RAB5A-204ENST00000443878 LINC00208Q96KT6 92 aa9.49□□□□□ -0.89
RAB5A-204ENST00000443878 OCR1Q9BZK8 76 aa9.48□□□□□ -0.89
RAB5A-204ENST00000443878 NDUFC1O43677 76 aa9.47□□□□□ -0.89
RAB5A-204ENST00000443878 Q5VV11 94 aa9.46□□□□□ -0.9
RAB5A-204ENST00000443878 IMUPQ9GZP8 106 aa9.46□□□□□ -0.9
RAB5A-204ENST00000443878 MACF1Q9UPN3 7388 aaKnown RBP9.45□□□□□ -0.9
RAB5A-204ENST00000443878 KRTAP19-8Q3LI54 63 aa9.44□□□□□ -0.9
RAB5A-204ENST00000443878 CRIPTQ9P021 101 aa9.44□□□□□ -0.9
RAB5A-204ENST00000443878 H3BPC8 53 aa9.4□□□□□ -0.9
RAB5A-204ENST00000443878 MT1BP07438 61 aa9.4□□□□□ -0.9
RAB5A-204ENST00000443878 H0YAA0 97 aa9.39□□□□□ -0.91
RAB5A-204ENST00000443878 SYNE2Q8WXH0 6885 aaKnown RBP9.35□□□□□ -0.91
RAB5A-204ENST00000443878 SCGB1A1P11684 91 aa9.35□□□□□ -0.91
RAB5A-204ENST00000443878 A6NN06 94 aa9.33□□□□□ -0.92
RAB5A-204ENST00000443878 ADM2Q7Z4H4 148 aa9.23□□□□□ -0.93
RAB5A-204ENST00000443878 KRTAP6-3Q3LI67 103 aa9.22□□□□□ -0.93
RAB5A-204ENST00000443878 KRTAP10-5P60370 271 aa9.21□□□□□ -0.94
RAB5A-204ENST00000443878 DMAC1Q96GE9 116 aa9.2□□□□□ -0.94
RAB5A-204ENST00000443878 K7ERU9 68 aa9.17□□□□□ -0.94
RAB5A-204ENST00000443878 SMIM20Q8N5G0 67 aa9.14□□□□□ -0.95
RAB5A-204ENST00000443878 C20orf197Q8N268 126 aa9.12□□□□□ -0.95
RAB5A-204ENST00000443878 MT-ATP8P03928 68 aa9.11□□□□□ -0.95
RAB5A-204ENST00000443878 TRAV7A0A075B6U4 112 aa9.08□□□□□ -0.96
RAB5A-204ENST00000443878 R4GN34 69 aa9.03□□□□□ -0.96
RAB5A-204ENST00000443878 ACYP2P14621 99 aa9.02□□□□□ -0.97
RAB5A-204ENST00000443878 P0C880 135 aa9□□□□□ -0.97
RAB5A-204ENST00000443878 PLAC4Q8WY50 150 aa8.97□□□□□ -0.97
RAB5A-204ENST00000443878 PRO2289Q9P1D8 64 aa8.96□□□□□ -0.98
RAB5A-204ENST00000443878 SPTSSBQ8NFR3 76 aa8.95□□□□□ -0.98
RAB5A-204ENST00000443878 M0QZ58 72 aa8.94□□□□□ -0.98
RAB5A-204ENST00000443878 KRTAP3-2Q9BYR7 98 aa8.92□□□□□ -0.98
RAB5A-204ENST00000443878 CHKB-CPT1BH3BT56 60 aa8.85□□□□□ -0.99
RAB5A-204ENST00000443878 SNURFQ9Y675 71 aa8.84□□□□□ -0.99
RAB5A-204ENST00000443878 MT1XP80297 61 aa8.83□□□□□ -1
RAB5A-204ENST00000443878 KRTAP5-9P26371 169 aa8.82□□□□□ -1
RAB5A-204ENST00000443878 SPANXA2-OT1Q8N9U9 137 aa8.8□□□□□ -1
RAB5A-204ENST00000443878 SERP2Q8N6R1 65 aa8.79□□□□□ -1
RAB5A-204ENST00000443878 NEBP20929 6669 aa8.79□□□□□ -1
RAB5A-204ENST00000443878 LINC01554Q52M75 96 aa8.78□□□□□ -1
RAB5A-204ENST00000443878 MUC12Q9UKN1 5478 aa8.71□□□□□ -1.02
RAB5A-204ENST00000443878 KRTAP12-2P59991 146 aa8.67□□□□□ -1.02
RAB5A-204ENST00000443878 KMT2DO14686 5537 aa8.6□□□□□ -1.03
RAB5A-204ENST00000443878 KRTAP8-1Q8IUC2 63 aa8.56□□□□□ -1.04
RAB5A-204ENST00000443878 SPRR2FQ96RM1 72 aa8.55□□□□□ -1.04
RAB5A-204ENST00000443878 COX7CP15954 63 aa8.52□□□□□ -1.05
RAB5A-204ENST00000443878 KRTAP20-1Q3LI63 56 aa8.51□□□□□ -1.05
RAB5A-204ENST00000443878 COA5Q86WW8 74 aa8.51□□□□□ -1.05
RAB5A-204ENST00000443878 MDN1Q9NU22 5596 aa8.5□□□□□ -1.05
RAB5A-204ENST00000443878 SPRR2EP22531 72 aa8.43□□□□□ -1.06
RAB5A-204ENST00000443878 SPRR2BP35325 72 aa8.43□□□□□ -1.06
RAB5A-204ENST00000443878 SPRR2AP35326 72 aa8.43□□□□□ -1.06
RAB5A-204ENST00000443878 SEC61GP60059 68 aa8.42□□□□□ -1.06
RAB5A-204ENST00000443878 KRTAP10-7P60409 375 aaPredicted RBP8.41□□□□□ -1.06
RAB5A-204ENST00000443878 KRTAP10-12P60413 245 aa8.41□□□□□ -1.06
RAB5A-204ENST00000443878 KRTAP13-4Q3LI77 160 aa8.4□□□□□ -1.06
RAB5A-204ENST00000443878 KRTAP4-8A0A0G2JLE6 195 aa8.39□□□□□ -1.07
RAB5A-204ENST00000443878 KRTAP4-8Q9BYQ9 185 aa8.39□□□□□ -1.07
RAB5A-204ENST00000443878 SERP1Q9Y6X1 66 aa8.39□□□□□ -1.07
RAB5A-204ENST00000443878 H7BZZ5 65 aa8.37□□□□□ -1.07
RAB5A-204ENST00000443878 KRTAP2-3P0C7H8 128 aa8.32□□□□□ -1.08
RAB5A-204ENST00000443878 CAMK2N1Q7Z7J9 78 aa8.32□□□□□ -1.08
RAB5A-204ENST00000443878 KRTAP2-4Q9BYR9 128 aa8.32□□□□□ -1.08
RAB5A-204ENST00000443878 LCE1AQ5T7P2 110 aa8.3□□□□□ -1.08
RAB5A-204ENST00000443878 CYSTM1Q9H1C7 97 aa8.29□□□□□ -1.08
RAB5A-204ENST00000443878 ANAPC13Q9BS18 74 aa8.23□□□□□ -1.09
RAB5A-204ENST00000443878 A0A1B0GU33 70 aa8.22□□□□□ -1.09
RAB5A-204ENST00000443878 A0A0D9SG42 100 aa8.18□□□□□ -1.1
RAB5A-204ENST00000443878 SPATA8Q6RVD6 105 aa8.17□□□□□ -1.1
RAB5A-204ENST00000443878 SPRR2DP22532 72 aa8.15□□□□□ -1.1
RAB5A-204ENST00000443878 A0A1B0GU69 56 aa8.1□□□□□ -1.11
RAB5A-204ENST00000443878 SPINT4Q6UDR6 99 aa8.09□□□□□ -1.11
RAB5A-204ENST00000443878 KRTAP2-2Q9BYT5 123 aa8.06□□□□□ -1.12
RAB5A-204ENST00000443878 KRTAP2-1Q9BYU5 128 aa8.06□□□□□ -1.12
RAB5A-204ENST00000443878 SMIM26A0A096LP01 95 aa8.03□□□□□ -1.12
RAB5A-204ENST00000443878 ATP5EP56381 51 aaPredicted RBP8.03□□□□□ -1.12
RAB5A-204ENST00000443878 KRTAP12-1P59990 96 aa8.03□□□□□ -1.12
RAB5A-204ENST00000443878 CCDC179H3BU77 68 aa8.01□□□□□ -1.13
RAB5A-204ENST00000443878 LCE3BQ5TA77 95 aa7.92□□□□□ -1.14
RAB5A-204ENST00000443878 PRR15LQ9BU68 103 aa7.92□□□□□ -1.14
RAB5A-204ENST00000443878 KRTAP19-7Q3SYF9 63 aa7.88□□□□□ -1.15
RAB5A-204ENST00000443878 A8MU10 97 aa7.85□□□□□ -1.15
RAB5A-204ENST00000443878 MT1EP04732 61 aa7.83□□□□□ -1.16
RAB5A-204ENST00000443878 LINC01558Q9Y6Z2 57 aa7.81□□□□□ -1.16
RAB5A-204ENST00000443878 TMEM258P61165 79 aa7.79□□□□□ -1.16
RAB5A-204ENST00000443878 LCE5AQ5TCM9 118 aa7.78□□□□□ -1.16
RAB5A-204ENST00000443878 KRTAP19-3Q7Z4W3 81 aa7.78□□□□□ -1.16
RAB5A-204ENST00000443878 KRTAP19-5Q3LI72 72 aa7.71□□□□□ -1.18
RAB5A-204ENST00000443878 TNP1P09430 55 aa7.7□□□□□ -1.18
RAB5A-204ENST00000443878 C10orf95Q9H7T3 257 aa7.66□□□□□ -1.18
RAB5A-204ENST00000443878 UQCR11O14957 56 aa7.64□□□□□ -1.19
RAB5A-204ENST00000443878 MT1GP13640 62 aa7.62□□□□□ -1.19
RAB5A-204ENST00000443878 PP632Q6XCG6 107 aa7.6□□□□□ -1.19
RAB5A-204ENST00000443878 LCE3AQ5TA76 89 aa7.56□□□□□ -1.2
RAB5A-204ENST00000443878 DSTQ03001 7570 aaKnown RBP7.55□□□□□ -1.2
RAB5A-204ENST00000443878 MT1LQ93083 61 aa7.49□□□□□ -1.21
RAB5A-204ENST00000443878 MT1MQ8N339 61 aa7.45□□□□□ -1.22
RAB5A-204ENST00000443878 MIR22HGQ0VDD5 57 aa7.44□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 69.8 ms